RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 KIF20BQ96Q89 1820 aa20.07■□□□□ 0.8
HIF3A-218ENST00000600383 U2SURPO15042 1029 aaKnown RBP20.06■□□□□ 0.8
HIF3A-218ENST00000600383 CHD2O14647 1828 aaKnown RBP20.06■□□□□ 0.8
HIF3A-218ENST00000600383 HSPA2P54652 639 aa20.05■□□□□ 0.8
HIF3A-218ENST00000600383 POLKQ9UBT6 870 aa20.05■□□□□ 0.8
HIF3A-218ENST00000600383 TTC21BQ7Z4L5 1316 aa20.05■□□□□ 0.8
HIF3A-218ENST00000600383 ANKRD26Q9UPS8 1709 aa20.05■□□□□ 0.8
HIF3A-218ENST00000600383 NEUROD2Q15784 382 aa20.03■□□□□ 0.8
HIF3A-218ENST00000600383 ITSN1Q15811 1721 aa20.03■□□□□ 0.8
HIF3A-218ENST00000600383 NKTRP30414 1462 aaKnown RBP20.03■□□□□ 0.8
HIF3A-218ENST00000600383 KDM4FA0A1W2PPD8 638 aa20.03■□□□□ 0.8
HIF3A-218ENST00000600383 RUNDC1Q96C34 613 aa20.02■□□□□ 0.8
HIF3A-218ENST00000600383 SHPRHQ149N8 1683 aa20.02■□□□□ 0.8
HIF3A-218ENST00000600383 DIAPH1O60610 1272 aaKnown RBP20.02■□□□□ 0.79
HIF3A-218ENST00000600383 EMILIN1Q9Y6C2 1016 aa20.02■□□□□ 0.79
HIF3A-218ENST00000600383 RGPD8O14715 1765 aaPredicted RBP20.01■□□□□ 0.79
HIF3A-218ENST00000600383 AKAP12Q02952 1782 aa20.01■□□□□ 0.79
HIF3A-218ENST00000600383 MON2Q7Z3U7 1717 aa20.01■□□□□ 0.79
HIF3A-218ENST00000600383 USP6P35125 1406 aa20.01■□□□□ 0.79
HIF3A-218ENST00000600383 RRS1Q15050 365 aaKnown RBP20■□□□□ 0.79
HIF3A-218ENST00000600383 RRP7AQ9Y3A4 280 aaKnown RBP20■□□□□ 0.79
HIF3A-218ENST00000600383 GOLGA2Q08379 1002 aa20■□□□□ 0.79
HIF3A-218ENST00000600383 PROSER2Q86WR7 435 aaPredicted RBP20■□□□□ 0.79
HIF3A-218ENST00000600383 TOPAZ1Q8N9V7 1692 aa20■□□□□ 0.79
HIF3A-218ENST00000600383 TCP11L2Q8N4U5 519 aa19.99■□□□□ 0.79
HIF3A-218ENST00000600383 SOX12O15370 315 aa19.99■□□□□ 0.79
HIF3A-218ENST00000600383 MAP2P11137 1827 aaKnown RBP19.97■□□□□ 0.79
HIF3A-218ENST00000600383 ZNF521Q96K83 1311 aa19.97■□□□□ 0.79
HIF3A-218ENST00000600383 ESCO1Q5FWF5 840 aa19.96■□□□□ 0.79
HIF3A-218ENST00000600383 RCAN3Q9UKA8 241 aa19.96■□□□□ 0.79
HIF3A-218ENST00000600383 ANKARQ7Z5J8 1434 aa19.96■□□□□ 0.79
HIF3A-218ENST00000600383 PNPLA6Q8IY17 1366 aa19.96■□□□□ 0.79
HIF3A-218ENST00000600383 PAK3O75914 559 aaPredicted RBP19.95■□□□□ 0.78
HIF3A-218ENST00000600383 PHF8Q9UPP1 1060 aa19.94■□□□□ 0.78
HIF3A-218ENST00000600383 NALCNQ8IZF0 1738 aa19.94■□□□□ 0.78
HIF3A-218ENST00000600383 COL3A1P02461 1466 aaPredicted RBP19.94■□□□□ 0.78
HIF3A-218ENST00000600383 ADGRL3Q9HAR2 1447 aa19.93■□□□□ 0.78
HIF3A-218ENST00000600383 NUTM2GQ5VZR2 741 aa19.93■□□□□ 0.78
HIF3A-218ENST00000600383 WWC1Q8IX03 1113 aa19.93■□□□□ 0.78
HIF3A-218ENST00000600383 NGEFQ8N5V2 710 aa19.93■□□□□ 0.78
HIF3A-218ENST00000600383 TTC21AQ8NDW8 1320 aa19.93■□□□□ 0.78
HIF3A-218ENST00000600383 AATKQ6ZMQ8 1374 aa19.93■□□□□ 0.78
HIF3A-218ENST00000600383 SPINK5Q9NQ38 1064 aaPredicted RBP19.93■□□□□ 0.78
HIF3A-218ENST00000600383 FMN2Q9NZ56 1722 aa19.93■□□□□ 0.78
HIF3A-218ENST00000600383 SLFN5Q08AF3 891 aa19.92■□□□□ 0.78
HIF3A-218ENST00000600383 DUSP27Q5VZP5 1158 aa19.92■□□□□ 0.78
HIF3A-218ENST00000600383 DMRT2Q9Y5R5 561 aa19.92■□□□□ 0.78
HIF3A-218ENST00000600383 SSH2Q76I76 1423 aa19.92■□□□□ 0.78
HIF3A-218ENST00000600383 NLRP6P59044 892 aa19.91■□□□□ 0.78
HIF3A-218ENST00000600383 MAPK8IP3Q9UPT6 1336 aa19.9■□□□□ 0.78
HIF3A-218ENST00000600383 NRKQ7Z2Y5 1582 aa19.9■□□□□ 0.78
HIF3A-218ENST00000600383 HMOX1P09601 288 aa19.9■□□□□ 0.78
HIF3A-218ENST00000600383 PSME1Q06323 249 aa19.9■□□□□ 0.78
HIF3A-218ENST00000600383 ABTB2Q8N961 1025 aa19.9■□□□□ 0.78
HIF3A-218ENST00000600383 PLEKHF1Q96S99 279 aa19.9■□□□□ 0.78
HIF3A-218ENST00000600383 ORAI2Q96SN7 254 aa19.89■□□□□ 0.77
HIF3A-218ENST00000600383 OVOS2A0A0J9YW53 1432 aa19.88■□□□□ 0.77
HIF3A-218ENST00000600383 OVOS2Q6IE36 1432 aa19.88■□□□□ 0.77
HIF3A-218ENST00000600383 RNF123Q5XPI4 1314 aa19.88■□□□□ 0.77
HIF3A-218ENST00000600383 E9PSI1 815 aa19.88■□□□□ 0.77
HIF3A-218ENST00000600383 IL13P35225 146 aa19.88■□□□□ 0.77
HIF3A-218ENST00000600383 PNNQ9H307 717 aaKnown RBP19.88■□□□□ 0.77
HIF3A-218ENST00000600383 C19orf44Q9H6X5 657 aa19.88■□□□□ 0.77
HIF3A-218ENST00000600383 FCHSD2O94868 740 aa19.87■□□□□ 0.77
HIF3A-218ENST00000600383 FOXO3O43524 673 aa19.86■□□□□ 0.77
HIF3A-218ENST00000600383 PRKAR2BP31323 418 aa19.86■□□□□ 0.77
HIF3A-218ENST00000600383 NEFMP07197 916 aa19.85■□□□□ 0.77
HIF3A-218ENST00000600383 RRP1P56182 461 aaKnown RBP19.85■□□□□ 0.77
HIF3A-218ENST00000600383 CDK12Q9NYV4 1490 aaPredicted RBP19.85■□□□□ 0.77
HIF3A-218ENST00000600383 TMPOP42166 694 aaKnown RBP19.85■□□□□ 0.77
HIF3A-218ENST00000600383 XPCQ01831 940 aaPredicted RBP19.85■□□□□ 0.77
HIF3A-218ENST00000600383 ERICH6BQ5W0A0 696 aa19.85■□□□□ 0.77
HIF3A-218ENST00000600383 TRMT2AQ8IZ69 625 aaKnown RBP19.85■□□□□ 0.77
HIF3A-218ENST00000600383 NWD1Q149M9 1564 aa19.85■□□□□ 0.77
HIF3A-218ENST00000600383 IQSEC2Q5JU85 1478 aa19.84■□□□□ 0.77
HIF3A-218ENST00000600383 HSP90AB2PQ58FF8 381 aa19.84■□□□□ 0.77
HIF3A-218ENST00000600383 USP31Q70CQ4 1352 aa19.84■□□□□ 0.77
HIF3A-218ENST00000600383 RSPH6AQ9H0K4 717 aa19.84■□□□□ 0.77
HIF3A-218ENST00000600383 TMEM94Q12767 1356 aa19.83■□□□□ 0.77
HIF3A-218ENST00000600383 ATF3P18847 181 aa19.83■□□□□ 0.77
HIF3A-218ENST00000600383 RIPK4P57078 832 aa19.83■□□□□ 0.77
HIF3A-218ENST00000600383 CCDC27Q2M243 656 aa19.83■□□□□ 0.77
HIF3A-218ENST00000600383 PLIN1O60240 522 aa19.82■□□□□ 0.76
HIF3A-218ENST00000600383 PHF23Q9BUL5 403 aaPredicted RBP19.82■□□□□ 0.76
HIF3A-218ENST00000600383 LMTK3Q96Q04 1460 aa19.82■□□□□ 0.76
HIF3A-218ENST00000600383 MAP3K19Q56UN5 1328 aa19.82■□□□□ 0.76
HIF3A-218ENST00000600383 PLEKHG5O94827 1062 aa19.82■□□□□ 0.76
HIF3A-218ENST00000600383 AMPHP49418 695 aa19.82■□□□□ 0.76
HIF3A-218ENST00000600383 EIF4A2Q14240 407 aaKnown RBP19.82■□□□□ 0.76
HIF3A-218ENST00000600383 WDR63Q8IWG1 891 aa19.82■□□□□ 0.76
HIF3A-218ENST00000600383 PPP4R2Q9NY27 417 aa19.82■□□□□ 0.76
HIF3A-218ENST00000600383 PHACTR3Q96KR7 559 aa19.81■□□□□ 0.76
HIF3A-218ENST00000600383 LMOD2Q6P5Q4 547 aa19.8■□□□□ 0.76
HIF3A-218ENST00000600383 PIK3C2AO00443 1686 aa19.79■□□□□ 0.76
HIF3A-218ENST00000600383 TRIM35Q9UPQ4 493 aa19.79■□□□□ 0.76
HIF3A-218ENST00000600383 SULT6B1Q6IMI4 303 aa19.78■□□□□ 0.76
HIF3A-218ENST00000600383 NCBP3Q53F19 620 aaKnown RBP19.77■□□□□ 0.76
HIF3A-218ENST00000600383 B4GALNT3Q6L9W6 998 aa19.77■□□□□ 0.76
HIF3A-218ENST00000600383 STRCP1A6NGW2 1772 aa19.77■□□□□ 0.76
HIF3A-218ENST00000600383 LRRC7Q96NW7 1537 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms