RNA–Protein interactions for RNA: ENST00000599255.5

EMP3-208, Transcript of epithelial membrane protein 3, humanhuman

TSL 3

Gene EMP3, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-208ENST00000599255 COL3A1P02461 1466 aaPredicted RBP18.96■□□□□ 0.63
EMP3-208ENST00000599255 NUTM2FA1L443 756 aa18.95■□□□□ 0.62
EMP3-208ENST00000599255 NGEFQ8N5V2 710 aa18.95■□□□□ 0.62
EMP3-208ENST00000599255 PNPLA6Q8IY17 1366 aa18.94■□□□□ 0.62
EMP3-208ENST00000599255 NME9Q86XW9 330 aa18.94■□□□□ 0.62
EMP3-208ENST00000599255 COG3Q96JB2 828 aa18.94■□□□□ 0.62
EMP3-208ENST00000599255 NUDCQ9Y266 331 aa18.94■□□□□ 0.62
EMP3-208ENST00000599255 MAP2P11137 1827 aaKnown RBP18.93■□□□□ 0.62
EMP3-208ENST00000599255 NCOA3Q9Y6Q9 1424 aa18.93■□□□□ 0.62
EMP3-208ENST00000599255 USP54Q70EL1 1684 aa18.92■□□□□ 0.62
EMP3-208ENST00000599255 OVOS2A0A0J9YW53 1432 aa18.91■□□□□ 0.62
EMP3-208ENST00000599255 OVOS2Q6IE36 1432 aa18.91■□□□□ 0.62
EMP3-208ENST00000599255 STRCQ7RTU9 1775 aa18.91■□□□□ 0.62
EMP3-208ENST00000599255 NGDNQ8NEJ9 315 aaKnown RBP18.91■□□□□ 0.62
EMP3-208ENST00000599255 PROSER2Q86WR7 435 aaPredicted RBP18.9■□□□□ 0.62
EMP3-208ENST00000599255 PMFBP1Q8TBY8 1022 aa18.9■□□□□ 0.62
EMP3-208ENST00000599255 STRCP1A6NGW2 1772 aa18.9■□□□□ 0.62
EMP3-208ENST00000599255 CDK12Q9NYV4 1490 aaPredicted RBP18.9■□□□□ 0.62
EMP3-208ENST00000599255 POLKQ9UBT6 870 aa18.89■□□□□ 0.61
EMP3-208ENST00000599255 USP31Q70CQ4 1352 aa18.89■□□□□ 0.61
EMP3-208ENST00000599255 LRRC7Q96NW7 1537 aa18.89■□□□□ 0.61
EMP3-208ENST00000599255 HSPA2P54652 639 aa18.88■□□□□ 0.61
EMP3-208ENST00000599255 RUNDC1Q96C34 613 aa18.88■□□□□ 0.61
EMP3-208ENST00000599255 PIK3C2AO00443 1686 aa18.87■□□□□ 0.61
EMP3-208ENST00000599255 NEFLP07196 543 aa18.87■□□□□ 0.61
EMP3-208ENST00000599255 NCBP3Q53F19 620 aaKnown RBP18.87■□□□□ 0.61
EMP3-208ENST00000599255 C14orf37Q86TY3 774 aa18.87■□□□□ 0.61
EMP3-208ENST00000599255 ZRANB1Q9UGI0 708 aa18.87■□□□□ 0.61
EMP3-208ENST00000599255 PHF8Q9UPP1 1060 aa18.87■□□□□ 0.61
EMP3-208ENST00000599255 DCCP43146 1447 aa18.86■□□□□ 0.61
EMP3-208ENST00000599255 ZNF521Q96K83 1311 aa18.86■□□□□ 0.61
EMP3-208ENST00000599255 DIAPH1O60610 1272 aaKnown RBP18.86■□□□□ 0.61
EMP3-208ENST00000599255 CCDC146Q8IYE0 955 aa18.86■□□□□ 0.61
EMP3-208ENST00000599255 KIF1AQ12756 1690 aa18.85■□□□□ 0.61
EMP3-208ENST00000599255 IQSEC2Q5JU85 1478 aa18.85■□□□□ 0.61
EMP3-208ENST00000599255 C19orf44Q9H6X5 657 aa18.85■□□□□ 0.61
EMP3-208ENST00000599255 SALL2Q9Y467 1007 aaPredicted RBP18.85■□□□□ 0.61
EMP3-208ENST00000599255 SUPT16HQ9Y5B9 1047 aaKnown RBP18.85■□□□□ 0.61
EMP3-208ENST00000599255 SENP3-EIF4A1A0A087X0R7 540 aa18.84■□□□□ 0.61
EMP3-208ENST00000599255 RBM33Q96EV2 1170 aaKnown RBP18.84■□□□□ 0.61
EMP3-208ENST00000599255 APAF1O14727 1248 aa18.83■□□□□ 0.6
EMP3-208ENST00000599255 U2AF1L5P0DN76 240 aaPredicted RBP18.83■□□□□ 0.6
EMP3-208ENST00000599255 U2AF1Q01081 240 aaKnown RBP eCLIP18.83■□□□□ 0.6
EMP3-208ENST00000599255 PNNQ9H307 717 aaKnown RBP18.83■□□□□ 0.6
EMP3-208ENST00000599255 MARF1Q9Y4F3 1742 aaKnown RBP18.82■□□□□ 0.6
EMP3-208ENST00000599255 TMEM94Q12767 1356 aa18.81■□□□□ 0.6
EMP3-208ENST00000599255 ESCO1Q5FWF5 840 aa18.8■□□□□ 0.6
EMP3-208ENST00000599255 EMILIN1Q9Y6C2 1016 aa18.8■□□□□ 0.6
EMP3-208ENST00000599255 C1orf167Q5SNV9 1468 aa18.79■□□□□ 0.6
EMP3-208ENST00000599255 U2SURPO15042 1029 aaKnown RBP18.79■□□□□ 0.6
EMP3-208ENST00000599255 GOLGA2Q08379 1002 aa18.79■□□□□ 0.6
EMP3-208ENST00000599255 PPM1GO15355 546 aaPredicted RBP18.78■□□□□ 0.6
EMP3-208ENST00000599255 FBLN1P23142 703 aa18.78■□□□□ 0.6
EMP3-208ENST00000599255 FKBP8Q14318 412 aa18.78■□□□□ 0.6
EMP3-208ENST00000599255 CCDC27Q2M243 656 aa18.78■□□□□ 0.6
EMP3-208ENST00000599255 PLEKHF1Q96S99 279 aa18.78■□□□□ 0.6
EMP3-208ENST00000599255 XIRP1Q702N8 1843 aaKnown RBP18.78■□□□□ 0.6
EMP3-208ENST00000599255 FCHSD2O94868 740 aa18.77■□□□□ 0.6
EMP3-208ENST00000599255 IL13P35225 146 aa18.77■□□□□ 0.6
EMP3-208ENST00000599255 ERICH6BQ5W0A0 696 aa18.77■□□□□ 0.6
EMP3-208ENST00000599255 TCP11L2Q8N4U5 519 aa18.77■□□□□ 0.6
EMP3-208ENST00000599255 CDCA7LQ96GN5 454 aa18.77■□□□□ 0.6
EMP3-208ENST00000599255 PEAK1Q9H792 1746 aa18.77■□□□□ 0.59
EMP3-208ENST00000599255 RNF123Q5XPI4 1314 aa18.76■□□□□ 0.59
EMP3-208ENST00000599255 MST1RQ04912 1400 aa18.76■□□□□ 0.59
EMP3-208ENST00000599255 ATF3P18847 181 aa18.76■□□□□ 0.59
EMP3-208ENST00000599255 PSME1Q06323 249 aa18.76■□□□□ 0.59
EMP3-208ENST00000599255 RRS1Q15050 365 aaKnown RBP18.76■□□□□ 0.59
EMP3-208ENST00000599255 PHF23Q9BUL5 403 aaPredicted RBP18.76■□□□□ 0.59
EMP3-208ENST00000599255 KIF24Q5T7B8 1368 aa18.76■□□□□ 0.59
EMP3-208ENST00000599255 SLFN5Q08AF3 891 aa18.75■□□□□ 0.59
EMP3-208ENST00000599255 TRPM3Q9HCF6 1732 aaPredicted RBP18.74■□□□□ 0.59
EMP3-208ENST00000599255 SBNO1A3KN83 1393 aa18.74■□□□□ 0.59
EMP3-208ENST00000599255 MSH6P52701 1360 aa18.74■□□□□ 0.59
EMP3-208ENST00000599255 NLRP6P59044 892 aa18.74■□□□□ 0.59
EMP3-208ENST00000599255 CADPS2Q86UW7 1296 aa18.74■□□□□ 0.59
EMP3-208ENST00000599255 TRMT2AQ8IZ69 625 aaKnown RBP18.74■□□□□ 0.59
EMP3-208ENST00000599255 ABTB2Q8N961 1025 aa18.74■□□□□ 0.59
EMP3-208ENST00000599255 MAPK8IP3Q9UPT6 1336 aa18.74■□□□□ 0.59
EMP3-208ENST00000599255 E9PSI1 815 aa18.73■□□□□ 0.59
EMP3-208ENST00000599255 WDR63Q8IWG1 891 aa18.73■□□□□ 0.59
EMP3-208ENST00000599255 WWC1Q8IX03 1113 aa18.73■□□□□ 0.59
EMP3-208ENST00000599255 ORAI2Q96SN7 254 aa18.73■□□□□ 0.59
EMP3-208ENST00000599255 RGPD1P0DJD0 1748 aa18.72■□□□□ 0.59
EMP3-208ENST00000599255 PAK3O75914 559 aaPredicted RBP18.72■□□□□ 0.59
EMP3-208ENST00000599255 DUSP27Q5VZP5 1158 aa18.72■□□□□ 0.59
EMP3-208ENST00000599255 RSPH6AQ9H0K4 717 aa18.72■□□□□ 0.59
EMP3-208ENST00000599255 DMRT2Q9Y5R5 561 aa18.72■□□□□ 0.59
EMP3-208ENST00000599255 FLT4P35916 1363 aa18.71■□□□□ 0.59
EMP3-208ENST00000599255 NEFMP07197 916 aa18.71■□□□□ 0.59
EMP3-208ENST00000599255 RCAN3Q9UKA8 241 aa18.71■□□□□ 0.59
EMP3-208ENST00000599255 MAP3K19Q56UN5 1328 aa18.71■□□□□ 0.59
EMP3-208ENST00000599255 TMPOP42166 694 aaKnown RBP18.69■□□□□ 0.58
EMP3-208ENST00000599255 NFAT5O94916 1531 aa18.69■□□□□ 0.58
EMP3-208ENST00000599255 RTL1A6NKG5 1358 aa18.68■□□□□ 0.58
EMP3-208ENST00000599255 PHRF1Q9P1Y6 1649 aaKnown RBP18.68■□□□□ 0.58
EMP3-208ENST00000599255 EIF4A2Q14240 407 aaKnown RBP18.68■□□□□ 0.58
EMP3-208ENST00000599255 RRP7AQ9Y3A4 280 aaKnown RBP18.68■□□□□ 0.58
EMP3-208ENST00000599255 SLIT3O75094 1523 aa18.68■□□□□ 0.58
EMP3-208ENST00000599255 ALS2Q96Q42 1657 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms