RNA–Protein interactions for RNA: ENST00000599231.5

STRN4-217, Transcript of striatin 4, humanhuman

TSL 2

Gene STRN4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-217ENST00000599231 USP6P35125 1406 aa18.57■□□□□ 0.56
STRN4-217ENST00000599231 LRP6O75581 1613 aa18.56■□□□□ 0.56
STRN4-217ENST00000599231 NPC1L1Q9UHC9 1359 aa18.56■□□□□ 0.56
STRN4-217ENST00000599231 CADPS2Q86UW7 1296 aa18.56■□□□□ 0.56
STRN4-217ENST00000599231 PMFBP1Q8TBY8 1022 aa18.56■□□□□ 0.56
STRN4-217ENST00000599231 SPATA31A6Q5VVP1 1343 aa18.55■□□□□ 0.56
STRN4-217ENST00000599231 CNGB1Q14028 1251 aaPredicted RBP18.55■□□□□ 0.56
STRN4-217ENST00000599231 PHF8Q9UPP1 1060 aa18.55■□□□□ 0.56
STRN4-217ENST00000599231 ZNF772Q68DY9 489 aaPredicted RBP18.54■□□□□ 0.56
STRN4-217ENST00000599231 UPF1Q92900 1129 aaKnown RBP eCLIP18.54■□□□□ 0.56
STRN4-217ENST00000599231 PRKRIP1Q9H875 184 aaPredicted RBP18.54■□□□□ 0.56
STRN4-217ENST00000599231 PARD3Q8TEW0 1356 aa18.54■□□□□ 0.56
STRN4-217ENST00000599231 ESCO1Q5FWF5 840 aa18.53■□□□□ 0.56
STRN4-217ENST00000599231 CC2D1BQ5T0F9 858 aaKnown RBP18.53■□□□□ 0.56
STRN4-217ENST00000599231 SSH2Q76I76 1423 aa18.53■□□□□ 0.56
STRN4-217ENST00000599231 ORAI2Q96SN7 254 aa18.53■□□□□ 0.56
STRN4-217ENST00000599231 TRPM3Q9HCF6 1732 aaPredicted RBP18.53■□□□□ 0.56
STRN4-217ENST00000599231 PIK3C2AO00443 1686 aa18.53■□□□□ 0.56
STRN4-217ENST00000599231 CGNL1Q0VF96 1302 aa18.52■□□□□ 0.56
STRN4-217ENST00000599231 NGDNQ8NEJ9 315 aaKnown RBP18.52■□□□□ 0.56
STRN4-217ENST00000599231 NSD2O96028 1365 aa18.52■□□□□ 0.55
STRN4-217ENST00000599231 MARF1Q9Y4F3 1742 aaKnown RBP18.5■□□□□ 0.55
STRN4-217ENST00000599231 ZNF692Q9BU19 519 aaPredicted RBP18.5■□□□□ 0.55
STRN4-217ENST00000599231 USP54Q70EL1 1684 aa18.5■□□□□ 0.55
STRN4-217ENST00000599231 AHDC1Q5TGY3 1603 aaPredicted RBP18.49■□□□□ 0.55
STRN4-217ENST00000599231 NHSL1Q5SYE7 1610 aa18.49■□□□□ 0.55
STRN4-217ENST00000599231 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.48■□□□□ 0.55
STRN4-217ENST00000599231 TTC21BQ7Z4L5 1316 aa18.48■□□□□ 0.55
STRN4-217ENST00000599231 SHPRHQ149N8 1683 aa18.47■□□□□ 0.55
STRN4-217ENST00000599231 NUTM2BA6NNL0 878 aaPredicted RBP18.47■□□□□ 0.55
STRN4-217ENST00000599231 NUTM2EB1AL46 878 aaPredicted RBP18.47■□□□□ 0.55
STRN4-217ENST00000599231 RXRBP28702 533 aa18.47■□□□□ 0.55
STRN4-217ENST00000599231 RALBP1Q15311 655 aa18.47■□□□□ 0.55
STRN4-217ENST00000599231 NUTM2AQ8IVF1 878 aaPredicted RBP18.47■□□□□ 0.55
STRN4-217ENST00000599231 BRINP3Q76B58 766 aa18.46■□□□□ 0.55
STRN4-217ENST00000599231 NME9Q86XW9 330 aa18.46■□□□□ 0.55
STRN4-217ENST00000599231 ALS2Q96Q42 1657 aa18.46■□□□□ 0.55
STRN4-217ENST00000599231 BRD4O60885 1362 aaPredicted RBP18.45■□□□□ 0.54
STRN4-217ENST00000599231 FYB1O15117 783 aa18.45■□□□□ 0.54
STRN4-217ENST00000599231 GGNBP2Q9H3C7 697 aa18.45■□□□□ 0.54
STRN4-217ENST00000599231 TTC21AQ8NDW8 1320 aa18.45■□□□□ 0.54
STRN4-217ENST00000599231 PXDNQ92626 1479 aa18.45■□□□□ 0.54
STRN4-217ENST00000599231 OVOS2A0A0J9YW53 1432 aa18.44■□□□□ 0.54
STRN4-217ENST00000599231 OVOS2Q6IE36 1432 aa18.44■□□□□ 0.54
STRN4-217ENST00000599231 MYBBP1AQ9BQG0 1328 aaKnown RBP18.44■□□□□ 0.54
STRN4-217ENST00000599231 FOXO3O43524 673 aa18.43■□□□□ 0.54
STRN4-217ENST00000599231 ZRANB1Q9UGI0 708 aa18.43■□□□□ 0.54
STRN4-217ENST00000599231 CCER2I3L3R5 266 aa18.42■□□□□ 0.54
STRN4-217ENST00000599231 XPCQ01831 940 aaPredicted RBP18.42■□□□□ 0.54
STRN4-217ENST00000599231 PSME1Q06323 249 aa18.42■□□□□ 0.54
STRN4-217ENST00000599231 MORC1Q86VD1 984 aa18.42■□□□□ 0.54
STRN4-217ENST00000599231 DDX17Q92841 729 aaKnown RBP18.41■□□□□ 0.54
STRN4-217ENST00000599231 AFF2P51816 1311 aa18.41■□□□□ 0.54
STRN4-217ENST00000599231 SRCAPQ6ZRS2 3230 aa18.4■□□□□ 0.54
STRN4-217ENST00000599231 NPHP3Q7Z494 1330 aa18.4■□□□□ 0.54
STRN4-217ENST00000599231 USP31Q70CQ4 1352 aa18.4■□□□□ 0.54
STRN4-217ENST00000599231 PPP2R1AP30153 589 aa18.39■□□□□ 0.53
STRN4-217ENST00000599231 KRT28Q7Z3Y7 464 aa18.39■□□□□ 0.53
STRN4-217ENST00000599231 CDK12Q9NYV4 1490 aaPredicted RBP18.39■□□□□ 0.53
STRN4-217ENST00000599231 PAK3O75914 559 aaPredicted RBP18.38■□□□□ 0.53
STRN4-217ENST00000599231 CCDC184Q52MB2 194 aa18.38■□□□□ 0.53
STRN4-217ENST00000599231 CRYBG1Q9Y4K1 1723 aa18.37■□□□□ 0.53
STRN4-217ENST00000599231 TNNT2P45379 298 aaPredicted RBP18.37■□□□□ 0.53
STRN4-217ENST00000599231 NLRP13Q86W25 1043 aa18.37■□□□□ 0.53
STRN4-217ENST00000599231 COG3Q96JB2 828 aa18.37■□□□□ 0.53
STRN4-217ENST00000599231 SBNO1A3KN83 1393 aa18.37■□□□□ 0.53
STRN4-217ENST00000599231 TNS3Q68CZ2 1445 aa18.37■□□□□ 0.53
STRN4-217ENST00000599231 PHRF1Q9P1Y6 1649 aaKnown RBP18.37■□□□□ 0.53
STRN4-217ENST00000599231 MAP2P11137 1827 aaKnown RBP18.37■□□□□ 0.53
STRN4-217ENST00000599231 C8orf37Q96NL8 207 aa18.36■□□□□ 0.53
STRN4-217ENST00000599231 SLIT3O75094 1523 aa18.35■□□□□ 0.53
STRN4-217ENST00000599231 LRRC59Q96AG4 307 aaKnown RBP18.35■□□□□ 0.53
STRN4-217ENST00000599231 NUTM2GQ5VZR2 741 aa18.34■□□□□ 0.53
STRN4-217ENST00000599231 ABTB2Q8N961 1025 aa18.34■□□□□ 0.53
STRN4-217ENST00000599231 QTRT2Q9H974 415 aaKnown RBP18.34■□□□□ 0.53
STRN4-217ENST00000599231 MRS2Q9HD23 443 aa18.34■□□□□ 0.53
STRN4-217ENST00000599231 ABCA3Q99758 1704 aa18.34■□□□□ 0.53
STRN4-217ENST00000599231 NFAT5O94916 1531 aa18.33■□□□□ 0.53
STRN4-217ENST00000599231 SMG6Q86US8 1419 aaKnown RBP18.33■□□□□ 0.53
STRN4-217ENST00000599231 SOS2Q07890 1332 aaPredicted RBP18.33■□□□□ 0.53
STRN4-217ENST00000599231 PEAK1Q9H792 1746 aa18.33■□□□□ 0.52
STRN4-217ENST00000599231 LTN1O94822 1766 aa18.32■□□□□ 0.52
STRN4-217ENST00000599231 AATKQ6ZMQ8 1374 aa18.32■□□□□ 0.52
STRN4-217ENST00000599231 NLRP6P59044 892 aa18.32■□□□□ 0.52
STRN4-217ENST00000599231 RBM6P78332 1123 aaKnown RBP18.32■□□□□ 0.52
STRN4-217ENST00000599231 RGS12O14924 1447 aa18.32■□□□□ 0.52
STRN4-217ENST00000599231 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
STRN4-217ENST00000599231 SPATA31A3Q5VYP0 1347 aa18.3■□□□□ 0.52
STRN4-217ENST00000599231 COL3A1P02461 1466 aaPredicted RBP18.3■□□□□ 0.52
STRN4-217ENST00000599231 USP19O94966 1318 aa18.29■□□□□ 0.52
STRN4-217ENST00000599231 FBLN1P23142 703 aa18.29■□□□□ 0.52
STRN4-217ENST00000599231 LMOD2Q6P5Q4 547 aa18.29■□□□□ 0.52
STRN4-217ENST00000599231 ARHGEF10O15013 1369 aa18.29■□□□□ 0.52
STRN4-217ENST00000599231 ADAMTS2O95450 1211 aa18.28■□□□□ 0.52
STRN4-217ENST00000599231 MTHFSP49914 203 aa18.28■□□□□ 0.52
STRN4-217ENST00000599231 COL22A1Q8NFW1 1626 aaPredicted RBP18.27■□□□□ 0.52
STRN4-217ENST00000599231 SOX12O15370 315 aa18.27■□□□□ 0.52
STRN4-217ENST00000599231 NGLY1Q96IV0 654 aa18.27■□□□□ 0.52
STRN4-217ENST00000599231 POLKQ9UBT6 870 aa18.26■□□□□ 0.51
STRN4-217ENST00000599231 EMILIN1Q9Y6C2 1016 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms