RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 THSD7AQ9UPZ6 1657 aa21.47■■□□□ 1.03
IRF3-223ENST00000599223 CCDC9Q9Y3X0 531 aaKnown RBP21.46■■□□□ 1.03
IRF3-223ENST00000599223 CCDC125Q86Z20 511 aa21.45■■□□□ 1.02
IRF3-223ENST00000599223 ONECUT3O60422 494 aaPredicted RBP21.44■■□□□ 1.02
IRF3-223ENST00000599223 NGDNQ8NEJ9 315 aaKnown RBP21.44■■□□□ 1.02
IRF3-223ENST00000599223 BTG4Q9NY30 223 aa21.44■■□□□ 1.02
IRF3-223ENST00000599223 DEFB132Q7Z7B7 95 aa21.43■■□□□ 1.02
IRF3-223ENST00000599223 NUDT16Q96DE0 195 aaKnown RBP21.43■■□□□ 1.02
IRF3-223ENST00000599223 NRKQ7Z2Y5 1582 aa21.43■■□□□ 1.02
IRF3-223ENST00000599223 QRICH2Q9H0J4 1663 aa21.42■■□□□ 1.02
IRF3-223ENST00000599223 PAK3O75914 559 aaPredicted RBP21.41■■□□□ 1.02
IRF3-223ENST00000599223 ZRANB1Q9UGI0 708 aa21.41■■□□□ 1.02
IRF3-223ENST00000599223 POLR3AO14802 1390 aaPredicted RBP21.4■■□□□ 1.02
IRF3-223ENST00000599223 FAM98CQ17RN3 349 aaKnown RBP21.4■■□□□ 1.02
IRF3-223ENST00000599223 NBPF1Q3BBV0 1214 aa21.4■■□□□ 1.02
IRF3-223ENST00000599223 KRT27Q7Z3Y8 459 aa21.4■■□□□ 1.02
IRF3-223ENST00000599223 KIAA0232Q92628 1395 aa21.39■■□□□ 1.02
IRF3-223ENST00000599223 TNS1Q9HBL0 1735 aaKnown RBP21.39■■□□□ 1.01
IRF3-223ENST00000599223 CDK19Q9BWU1 502 aa21.39■■□□□ 1.01
IRF3-223ENST00000599223 RGPD1P0DJD0 1748 aa21.38■■□□□ 1.01
IRF3-223ENST00000599223 SPATA31A5Q5VU36 1347 aa21.37■■□□□ 1.01
IRF3-223ENST00000599223 SPATA31A7Q8IWB4 1347 aa21.37■■□□□ 1.01
IRF3-223ENST00000599223 A0A0G2JS52 829 aa21.37■■□□□ 1.01
IRF3-223ENST00000599223 MYT1Q01538 1121 aa21.37■■□□□ 1.01
IRF3-223ENST00000599223 PRDM11Q9NQV5 511 aa21.37■■□□□ 1.01
IRF3-223ENST00000599223 LMO7Q8WWI1 1683 aa21.36■■□□□ 1.01
IRF3-223ENST00000599223 ACEP12821 1306 aa21.35■■□□□ 1.01
IRF3-223ENST00000599223 NUTM2GQ5VZR2 741 aa21.35■■□□□ 1.01
IRF3-223ENST00000599223 CHRNA2Q15822 529 aa21.34■■□□□ 1.01
IRF3-223ENST00000599223 TRPM1Q7Z4N2 1603 aa21.33■■□□□ 1.01
IRF3-223ENST00000599223 FAM182BQ5T319 152 aa21.33■■□□□ 1.01
IRF3-223ENST00000599223 CCDC61Q9Y6R9 512 aa21.32■■□□□ 1
IRF3-223ENST00000599223 CAMTA1Q9Y6Y1 1673 aa21.31■■□□□ 1
IRF3-223ENST00000599223 PPIP5K1Q6PFW1 1433 aa21.31■■□□□ 1
IRF3-223ENST00000599223 PLEKHG3A1L390 1219 aa21.31■■□□□ 1
IRF3-223ENST00000599223 NBPF8Q3BBV2 869 aa21.31■■□□□ 1
IRF3-223ENST00000599223 LRP5O75197 1615 aa21.3■■□□□ 1
IRF3-223ENST00000599223 SF3B2Q13435 895 aaKnown RBP21.3■■□□□ 1
IRF3-223ENST00000599223 USP19O94966 1318 aa21.29■■□□□ 1
IRF3-223ENST00000599223 SPATA31A1Q5TZJ5 1347 aa21.29■■□□□ 1
IRF3-223ENST00000599223 CENPJQ9HC77 1338 aaPredicted RBP21.29■■□□□ 1
IRF3-223ENST00000599223 ZC3H6P61129 1189 aaKnown RBP21.29■■□□□ 1
IRF3-223ENST00000599223 SSH2Q76I76 1423 aa21.29■■□□□ 1
IRF3-223ENST00000599223 PIK3C2AO00443 1686 aa21.28■■□□□ 1
IRF3-223ENST00000599223 CABP2Q9NPB3 220 aa21.27■■□□□ 1
IRF3-223ENST00000599223 STRN4Q9NRL3 753 aa21.27■■□□□ 1
IRF3-223ENST00000599223 CPDO75976 1380 aa21.25■□□□□ 0.99
IRF3-223ENST00000599223 DISP2A7MBM2 1401 aa21.25■□□□□ 0.99
IRF3-223ENST00000599223 SRPK2P78362 688 aaKnown RBP21.25■□□□□ 0.99
IRF3-223ENST00000599223 ABTB2Q8N961 1025 aa21.24■□□□□ 0.99
IRF3-223ENST00000599223 L3MBTL2Q969R5 705 aa21.24■□□□□ 0.99
IRF3-223ENST00000599223 SLIT3O75094 1523 aa21.24■□□□□ 0.99
IRF3-223ENST00000599223 USP6P35125 1406 aa21.23■□□□□ 0.99
IRF3-223ENST00000599223 BAG6P46379 1132 aa21.23■□□□□ 0.99
IRF3-223ENST00000599223 AKAP12Q02952 1782 aa21.23■□□□□ 0.99
IRF3-223ENST00000599223 COL5A2P05997 1499 aaPredicted RBP21.22■□□□□ 0.99
IRF3-223ENST00000599223 PARP4Q9UKK3 1724 aaKnown RBP21.22■□□□□ 0.99
IRF3-223ENST00000599223 PSDA5PKW4 1024 aaPredicted RBP21.21■□□□□ 0.99
IRF3-223ENST00000599223 EN1Q05925 392 aaPredicted RBP21.21■□□□□ 0.99
IRF3-223ENST00000599223 LARP1Q6PKG0 1096 aaKnown RBP21.21■□□□□ 0.99
IRF3-223ENST00000599223 SIN3AQ96ST3 1273 aa21.21■□□□□ 0.99
IRF3-223ENST00000599223 USP35Q9P2H5 1018 aa21.21■□□□□ 0.99
IRF3-223ENST00000599223 RREB1Q92766 1687 aa21.21■□□□□ 0.99
IRF3-223ENST00000599223 WNK3Q9BYP7 1800 aa21.2■□□□□ 0.98
IRF3-223ENST00000599223 COL18A1P39060 1754 aa21.2■□□□□ 0.98
IRF3-223ENST00000599223 LRRC37A3O60309 1634 aa21.18■□□□□ 0.98
IRF3-223ENST00000599223 NUP188Q5SRE5 1749 aa21.18■□□□□ 0.98
IRF3-223ENST00000599223 GCP02774 474 aa21.17■□□□□ 0.98
IRF3-223ENST00000599223 CABP1Q9NZU7 370 aa21.17■□□□□ 0.98
IRF3-223ENST00000599223 PEAK1Q9H792 1746 aa21.16■□□□□ 0.98
IRF3-223ENST00000599223 BRD4O60885 1362 aaPredicted RBP21.16■□□□□ 0.98
IRF3-223ENST00000599223 BARGINQ6ZT62 677 aa21.16■□□□□ 0.98
IRF3-223ENST00000599223 RGPD5Q99666 1765 aa21.15■□□□□ 0.98
IRF3-223ENST00000599223 ROCK2O75116 1388 aaKnown RBP21.15■□□□□ 0.98
IRF3-223ENST00000599223 TRIM37O94972 964 aa21.15■□□□□ 0.98
IRF3-223ENST00000599223 NLRP13Q86W25 1043 aa21.15■□□□□ 0.98
IRF3-223ENST00000599223 EVA1CP58658 441 aa21.14■□□□□ 0.97
IRF3-223ENST00000599223 EZH2Q15910 746 aaKnown RBP21.14■□□□□ 0.97
IRF3-223ENST00000599223 MON2Q7Z3U7 1717 aa21.14■□□□□ 0.97
IRF3-223ENST00000599223 TCP11L2Q8N4U5 519 aa21.13■□□□□ 0.97
IRF3-223ENST00000599223 FAM196AQ6ZSG2 479 aa21.12■□□□□ 0.97
IRF3-223ENST00000599223 CRB1P82279 1406 aa21.12■□□□□ 0.97
IRF3-223ENST00000599223 SBF2Q86WG5 1849 aa21.11■□□□□ 0.97
IRF3-223ENST00000599223 EVC2Q86UK5 1308 aa21.11■□□□□ 0.97
IRF3-223ENST00000599223 NEUROD1Q13562 356 aa21.11■□□□□ 0.97
IRF3-223ENST00000599223 CAMKK2Q96RR4 588 aa21.11■□□□□ 0.97
IRF3-223ENST00000599223 AATKQ6ZMQ8 1374 aa21.1■□□□□ 0.97
IRF3-223ENST00000599223 NFAT5O94916 1531 aa21.1■□□□□ 0.97
IRF3-223ENST00000599223 ZBTB7CA1YPR0 619 aa21.1■□□□□ 0.97
IRF3-223ENST00000599223 NLRP6P59044 892 aa21.1■□□□□ 0.97
IRF3-223ENST00000599223 R3HDM1Q15032 1099 aaKnown RBP21.1■□□□□ 0.97
IRF3-223ENST00000599223 CPSF1Q10570 1443 aaKnown RBP21.1■□□□□ 0.97
IRF3-223ENST00000599223 USP54Q70EL1 1684 aa21.08■□□□□ 0.96
IRF3-223ENST00000599223 PDE3BQ13370 1112 aa21.07■□□□□ 0.96
IRF3-223ENST00000599223 PARD3Q8TEW0 1356 aa21.07■□□□□ 0.96
IRF3-223ENST00000599223 RGPD3A6NKT7 1758 aaPredicted RBP21.06■□□□□ 0.96
IRF3-223ENST00000599223 RGPD4Q7Z3J3 1758 aa21.06■□□□□ 0.96
IRF3-223ENST00000599223 APBA3O96018 575 aa21.06■□□□□ 0.96
IRF3-223ENST00000599223 THRAP3Q9Y2W1 955 aaKnown RBP21.06■□□□□ 0.96
IRF3-223ENST00000599223 TTC21BQ7Z4L5 1316 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms