RNA–Protein interactions for RNA: ENST00000598996.2

FENDRR-205, FOXF1 adjacent non-coding developmental regulatory RNA, humanhuman

TSL 1 (best)

Gene FENDRR, Length 2,835 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FENDRR-205ENST00000598996 FRAT1Q92837 279 aaPredicted RBP11.51□□□□□ -0.57
FENDRR-205ENST00000598996 MYH16Q9H6N6 1097 aa11.51□□□□□ -0.57
FENDRR-205ENST00000598996 MAPK8IP3Q9UPT6 1336 aa11.51□□□□□ -0.57
FENDRR-205ENST00000598996 U2AF1L5P0DN76 240 aaPredicted RBP11.51□□□□□ -0.57
FENDRR-205ENST00000598996 U2AF1Q01081 240 aaKnown RBP eCLIP11.51□□□□□ -0.57
FENDRR-205ENST00000598996 ATAD2Q6PL18 1390 aa11.51□□□□□ -0.57
FENDRR-205ENST00000598996 COL3A1P02461 1466 aaPredicted RBP11.5□□□□□ -0.57
FENDRR-205ENST00000598996 SAFB2Q14151 953 aaKnown RBP eCLIP11.5□□□□□ -0.57
FENDRR-205ENST00000598996 PMFBP1Q8TBY8 1022 aa11.5□□□□□ -0.57
FENDRR-205ENST00000598996 SRPK2P78362 688 aaKnown RBP11.5□□□□□ -0.57
FENDRR-205ENST00000598996 CD163L1Q9NR16 1453 aa11.49□□□□□ -0.57
FENDRR-205ENST00000598996 YTHDC2Q9H6S0 1430 aaKnown RBP11.49□□□□□ -0.57
FENDRR-205ENST00000598996 STK26Q9P289 416 aa11.49□□□□□ -0.57
FENDRR-205ENST00000598996 ALKQ9UM73 1620 aa11.49□□□□□ -0.57
FENDRR-205ENST00000598996 CT47B1P0C2W7 299 aaPredicted RBP11.48□□□□□ -0.57
FENDRR-205ENST00000598996 RLBP1P12271 317 aa11.48□□□□□ -0.57
FENDRR-205ENST00000598996 TERF2IPQ9NYB0 399 aa11.48□□□□□ -0.57
FENDRR-205ENST00000598996 NLRP1Q9C000 1473 aa11.48□□□□□ -0.57
FENDRR-205ENST00000598996 ZMYM3Q14202 1370 aa11.48□□□□□ -0.57
FENDRR-205ENST00000598996 PLEKHF1Q96S99 279 aa11.48□□□□□ -0.57
FENDRR-205ENST00000598996 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.47□□□□□ -0.57
FENDRR-205ENST00000598996 SLC4A3P48751 1232 aa11.47□□□□□ -0.57
FENDRR-205ENST00000598996 FAM69CQ0P6D2 419 aa11.47□□□□□ -0.57
FENDRR-205ENST00000598996 GGNBP2Q9H3C7 697 aa11.47□□□□□ -0.57
FENDRR-205ENST00000598996 PCDHB15Q9Y5E8 787 aa11.47□□□□□ -0.57
FENDRR-205ENST00000598996 FYB1O15117 783 aa11.46□□□□□ -0.57
FENDRR-205ENST00000598996 PRAM1Q96QH2 718 aa11.46□□□□□ -0.57
FENDRR-205ENST00000598996 BCL2L13Q9BXK5 485 aa11.46□□□□□ -0.57
FENDRR-205ENST00000598996 TNNQ9UQP3 1299 aa11.46□□□□□ -0.57
FENDRR-205ENST00000598996 MINK1Q8N4C8 1332 aaPredicted RBP11.46□□□□□ -0.57
FENDRR-205ENST00000598996 MAP2P11137 1827 aaKnown RBP11.46□□□□□ -0.58
FENDRR-205ENST00000598996 USP19O94966 1318 aa11.46□□□□□ -0.58
FENDRR-205ENST00000598996 ARHGEF40Q8TER5 1519 aa11.46□□□□□ -0.58
FENDRR-205ENST00000598996 SETD1AO15047 1707 aaKnown RBP11.46□□□□□ -0.58
FENDRR-205ENST00000598996 TMPOP42166 694 aaKnown RBP11.45□□□□□ -0.58
FENDRR-205ENST00000598996 POGKQ9P215 609 aa11.45□□□□□ -0.58
FENDRR-205ENST00000598996 REREQ9P2R6 1566 aa11.45□□□□□ -0.58
FENDRR-205ENST00000598996 ZKSCAN2Q63HK3 967 aa11.45□□□□□ -0.58
FENDRR-205ENST00000598996 CDC42BPGQ6DT37 1551 aa11.45□□□□□ -0.58
FENDRR-205ENST00000598996 U2SURPO15042 1029 aaKnown RBP11.45□□□□□ -0.58
FENDRR-205ENST00000598996 MVPQ14764 893 aaKnown RBP11.45□□□□□ -0.58
FENDRR-205ENST00000598996 NFKBIBQ15653 356 aa11.45□□□□□ -0.58
FENDRR-205ENST00000598996 IL16Q14005 1332 aa11.44□□□□□ -0.58
FENDRR-205ENST00000598996 PNPLA6Q8IY17 1366 aa11.44□□□□□ -0.58
FENDRR-205ENST00000598996 RWDD1Q9H446 243 aaPredicted RBP11.44□□□□□ -0.58
FENDRR-205ENST00000598996 TRIM35Q9UPQ4 493 aa11.44□□□□□ -0.58
FENDRR-205ENST00000598996 DLC1Q96QB1 1528 aa11.44□□□□□ -0.58
FENDRR-205ENST00000598996 HDGFL2Q7Z4V5 671 aaPredicted RBP11.44□□□□□ -0.58
FENDRR-205ENST00000598996 FBXO31Q5XUX0 539 aaPredicted RBP11.43□□□□□ -0.58
FENDRR-205ENST00000598996 DZIP1LQ8IYY4 767 aaKnown RBP11.43□□□□□ -0.58
FENDRR-205ENST00000598996 TSR2Q969E8 191 aaKnown RBP11.43□□□□□ -0.58
FENDRR-205ENST00000598996 TSPOAP1O95153 1857 aa11.43□□□□□ -0.58
FENDRR-205ENST00000598996 AGLP35573 1532 aa11.43□□□□□ -0.58
FENDRR-205ENST00000598996 EXOSC9Q06265 439 aaKnown RBP11.42□□□□□ -0.58
FENDRR-205ENST00000598996 CDK19Q9BWU1 502 aa11.42□□□□□ -0.58
FENDRR-205ENST00000598996 PNNQ9H307 717 aaKnown RBP11.42□□□□□ -0.58
FENDRR-205ENST00000598996 PDZRN3Q9UPQ7 1066 aa11.42□□□□□ -0.58
FENDRR-205ENST00000598996 DIAPH1O60610 1272 aaKnown RBP11.42□□□□□ -0.58
FENDRR-205ENST00000598996 SEC24BO95487 1268 aa11.42□□□□□ -0.58
FENDRR-205ENST00000598996 FTSJ3Q8IY81 847 aaKnown RBP11.41□□□□□ -0.58
FENDRR-205ENST00000598996 SPATA31D1Q6ZQQ2 1576 aa11.41□□□□□ -0.58
FENDRR-205ENST00000598996 ATP7BP35670 1465 aa11.41□□□□□ -0.58
FENDRR-205ENST00000598996 DIP2BQ9P265 1576 aa11.41□□□□□ -0.58
FENDRR-205ENST00000598996 SMC4Q9NTJ3 1288 aa11.41□□□□□ -0.58
FENDRR-205ENST00000598996 LRRC7Q96NW7 1537 aa11.41□□□□□ -0.58
FENDRR-205ENST00000598996 RIPK4P57078 832 aa11.4□□□□□ -0.58
FENDRR-205ENST00000598996 CABP1Q9NZU7 370 aa11.4□□□□□ -0.58
FENDRR-205ENST00000598996 STAG3Q9UJ98 1225 aa11.4□□□□□ -0.58
FENDRR-205ENST00000598996 A2ML1A8K2U0 1454 aa11.4□□□□□ -0.58
FENDRR-205ENST00000598996 TRIM27P14373 513 aa11.4□□□□□ -0.59
FENDRR-205ENST00000598996 IL27Q8NEV9 243 aa11.4□□□□□ -0.59
FENDRR-205ENST00000598996 SSH1Q8WYL5 1049 aa11.4□□□□□ -0.59
FENDRR-205ENST00000598996 HOMEZQ8IX15 550 aa11.39□□□□□ -0.59
FENDRR-205ENST00000598996 DDX19BQ9UMR2 479 aa11.39□□□□□ -0.59
FENDRR-205ENST00000598996 FCHSD2O94868 740 aa11.39□□□□□ -0.59
FENDRR-205ENST00000598996 ATF7IPQ6VMQ6 1270 aa11.39□□□□□ -0.59
FENDRR-205ENST00000598996 DLG5Q8TDM6 1919 aa11.38□□□□□ -0.59
FENDRR-205ENST00000598996 FAM135BQ49AJ0 1406 aa11.38□□□□□ -0.59
FENDRR-205ENST00000598996 HDAC1Q13547 482 aaPredicted RBP11.38□□□□□ -0.59
FENDRR-205ENST00000598996 BECN1Q14457 450 aa11.38□□□□□ -0.59
FENDRR-205ENST00000598996 GSE1Q14687 1217 aa11.38□□□□□ -0.59
FENDRR-205ENST00000598996 NRXN3Q9Y4C0 1643 aa11.38□□□□□ -0.59
FENDRR-205ENST00000598996 RIMS2Q9UQ26 1411 aa11.38□□□□□ -0.59
FENDRR-205ENST00000598996 UPF2Q9HAU5 1272 aaKnown RBP11.37□□□□□ -0.59
FENDRR-205ENST00000598996 KIF16BQ96L93 1317 aa11.37□□□□□ -0.59
FENDRR-205ENST00000598996 KNDC1Q76NI1 1749 aa11.37□□□□□ -0.59
FENDRR-205ENST00000598996 MON2Q7Z3U7 1717 aa11.37□□□□□ -0.59
FENDRR-205ENST00000598996 TBC1D32Q96NH3 1257 aa11.36□□□□□ -0.59
FENDRR-205ENST00000598996 NOB1Q9ULX3 412 aaKnown RBP11.36□□□□□ -0.59
FENDRR-205ENST00000598996 ALDH1L2Q3SY69 923 aa11.36□□□□□ -0.59
FENDRR-205ENST00000598996 RSPH6AQ9H0K4 717 aa11.36□□□□□ -0.59
FENDRR-205ENST00000598996 POLKQ9UBT6 870 aa11.36□□□□□ -0.59
FENDRR-205ENST00000598996 PPIP5K1Q6PFW1 1433 aa11.36□□□□□ -0.59
FENDRR-205ENST00000598996 AKAP12Q02952 1782 aa11.36□□□□□ -0.59
FENDRR-205ENST00000598996 IPO8O15397 1037 aaKnown RBP11.36□□□□□ -0.59
FENDRR-205ENST00000598996 ITPRIPQ8IWB1 547 aa11.36□□□□□ -0.59
FENDRR-205ENST00000598996 CPSF1Q10570 1443 aaKnown RBP11.35□□□□□ -0.59
FENDRR-205ENST00000598996 FRAT2O75474 233 aaPredicted RBP11.35□□□□□ -0.59
FENDRR-205ENST00000598996 WAPLQ7Z5K2 1190 aa11.35□□□□□ -0.59
FENDRR-205ENST00000598996 EDC4Q6P2E9 1401 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms