RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 NUTM2GQ5VZR2 741 aa17■□□□□ 0.31
ZNF548-209ENST00000598895 SBNO2Q9Y2G9 1366 aa17■□□□□ 0.31
ZNF548-209ENST00000598895 ZNF772Q68DY9 489 aaPredicted RBP16.98■□□□□ 0.31
ZNF548-209ENST00000598895 CRYBG1Q9Y4K1 1723 aa16.97■□□□□ 0.31
ZNF548-209ENST00000598895 TESK2Q96S53 571 aa16.97■□□□□ 0.31
ZNF548-209ENST00000598895 AKAP12Q02952 1782 aa16.97■□□□□ 0.31
ZNF548-209ENST00000598895 TMC1Q8TDI8 760 aa16.96■□□□□ 0.31
ZNF548-209ENST00000598895 ATAD2Q6PL18 1390 aa16.96■□□□□ 0.31
ZNF548-209ENST00000598895 USP21Q9UK80 565 aa16.95■□□□□ 0.3
ZNF548-209ENST00000598895 PHRF1Q9P1Y6 1649 aaKnown RBP16.95■□□□□ 0.3
ZNF548-209ENST00000598895 USP6P35125 1406 aa16.95■□□□□ 0.3
ZNF548-209ENST00000598895 ABTB2Q8N961 1025 aa16.94■□□□□ 0.3
ZNF548-209ENST00000598895 PLCH1Q4KWH8 1693 aa16.94■□□□□ 0.3
ZNF548-209ENST00000598895 QTRT2Q9H974 415 aaKnown RBP16.92■□□□□ 0.3
ZNF548-209ENST00000598895 MON2Q7Z3U7 1717 aa16.91■□□□□ 0.3
ZNF548-209ENST00000598895 SLC12A5Q9H2X9 1139 aa16.91■□□□□ 0.3
ZNF548-209ENST00000598895 PIK3C2AO00443 1686 aa16.91■□□□□ 0.3
ZNF548-209ENST00000598895 KTN1Q86UP2 1357 aaKnown RBP16.9■□□□□ 0.3
ZNF548-209ENST00000598895 NRKQ7Z2Y5 1582 aa16.9■□□□□ 0.3
ZNF548-209ENST00000598895 RXRBP28702 533 aa16.9■□□□□ 0.3
ZNF548-209ENST00000598895 TMF1P82094 1093 aa16.9■□□□□ 0.3
ZNF548-209ENST00000598895 FNBP4Q8N3X1 1017 aaPredicted RBP16.9■□□□□ 0.3
ZNF548-209ENST00000598895 CPSF1Q10570 1443 aaKnown RBP16.89■□□□□ 0.29
ZNF548-209ENST00000598895 BCL9LQ86UU0 1499 aa16.89■□□□□ 0.29
ZNF548-209ENST00000598895 CD163L1Q9NR16 1453 aa16.89■□□□□ 0.29
ZNF548-209ENST00000598895 SLIT2O94813 1529 aa16.88■□□□□ 0.29
ZNF548-209ENST00000598895 FAM83GA6ND36 823 aa16.88■□□□□ 0.29
ZNF548-209ENST00000598895 SOCS7O14512 581 aa16.88■□□□□ 0.29
ZNF548-209ENST00000598895 ZC3H6P61129 1189 aaKnown RBP16.88■□□□□ 0.29
ZNF548-209ENST00000598895 ZNF692Q9BU19 519 aaPredicted RBP16.88■□□□□ 0.29
ZNF548-209ENST00000598895 SSH2Q76I76 1423 aa16.87■□□□□ 0.29
ZNF548-209ENST00000598895 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.87■□□□□ 0.29
ZNF548-209ENST00000598895 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
ZNF548-209ENST00000598895 NLRP6P59044 892 aa16.87■□□□□ 0.29
ZNF548-209ENST00000598895 NLRP13Q86W25 1043 aa16.87■□□□□ 0.29
ZNF548-209ENST00000598895 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.87■□□□□ 0.29
ZNF548-209ENST00000598895 PELP1Q8IZL8 1130 aaKnown RBP16.87■□□□□ 0.29
ZNF548-209ENST00000598895 TRPC5Q9UL62 973 aaPredicted RBP16.87■□□□□ 0.29
ZNF548-209ENST00000598895 TTC21BQ7Z4L5 1316 aa16.87■□□□□ 0.29
ZNF548-209ENST00000598895 ZBTB7CA1YPR0 619 aa16.86■□□□□ 0.29
ZNF548-209ENST00000598895 HSPA5P11021 654 aaKnown RBP16.86■□□□□ 0.29
ZNF548-209ENST00000598895 CHRNA2Q15822 529 aa16.86■□□□□ 0.29
ZNF548-209ENST00000598895 HDGFL2Q7Z4V5 671 aaPredicted RBP16.86■□□□□ 0.29
ZNF548-209ENST00000598895 PRDM11Q9NQV5 511 aa16.86■□□□□ 0.29
ZNF548-209ENST00000598895 NWD2Q9ULI1 1742 aa16.86■□□□□ 0.29
ZNF548-209ENST00000598895 A0A1W2PP64 1363 aa16.86■□□□□ 0.29
ZNF548-209ENST00000598895 BRD4O60885 1362 aaPredicted RBP16.86■□□□□ 0.29
ZNF548-209ENST00000598895 KIAA0232Q92628 1395 aa16.86■□□□□ 0.29
ZNF548-209ENST00000598895 ATRNO75882 1429 aa16.86■□□□□ 0.29
ZNF548-209ENST00000598895 SLC24A1O60721 1099 aa16.85■□□□□ 0.29
ZNF548-209ENST00000598895 RBM6P78332 1123 aaKnown RBP16.85■□□□□ 0.29
ZNF548-209ENST00000598895 EIF4G2P78344 907 aaKnown RBP eCLIP16.85■□□□□ 0.29
ZNF548-209ENST00000598895 UNC5CLQ8IV45 518 aa16.85■□□□□ 0.29
ZNF548-209ENST00000598895 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
ZNF548-209ENST00000598895 NRAPQ86VF7 1730 aa16.84■□□□□ 0.29
ZNF548-209ENST00000598895 SOX12O15370 315 aa16.84■□□□□ 0.29
ZNF548-209ENST00000598895 PUS7Q96PZ0 661 aaKnown RBP16.84■□□□□ 0.29
ZNF548-209ENST00000598895 BTG4Q9NY30 223 aa16.84■□□□□ 0.29
ZNF548-209ENST00000598895 TERF2IPQ9NYB0 399 aa16.84■□□□□ 0.29
ZNF548-209ENST00000598895 ZRANB1Q9UGI0 708 aa16.84■□□□□ 0.29
ZNF548-209ENST00000598895 CCDC9Q9Y3X0 531 aaKnown RBP16.84■□□□□ 0.29
ZNF548-209ENST00000598895 USP19O94966 1318 aa16.84■□□□□ 0.29
ZNF548-209ENST00000598895 RGS12O14924 1447 aa16.83■□□□□ 0.28
ZNF548-209ENST00000598895 MYOM1P52179 1685 aa16.82■□□□□ 0.28
ZNF548-209ENST00000598895 TTC21AQ8NDW8 1320 aa16.82■□□□□ 0.28
ZNF548-209ENST00000598895 GCP02774 474 aa16.82■□□□□ 0.28
ZNF548-209ENST00000598895 NME9Q86XW9 330 aa16.82■□□□□ 0.28
ZNF548-209ENST00000598895 GLI3P10071 1580 aa16.81■□□□□ 0.28
ZNF548-209ENST00000598895 SLIT3O75094 1523 aa16.81■□□□□ 0.28
ZNF548-209ENST00000598895 NINLQ9Y2I6 1382 aa16.8■□□□□ 0.28
ZNF548-209ENST00000598895 CDCA8Q53HL2 280 aa16.8■□□□□ 0.28
ZNF548-209ENST00000598895 GJD4Q96KN9 370 aaPredicted RBP16.8■□□□□ 0.28
ZNF548-209ENST00000598895 STRN4Q9NRL3 753 aa16.8■□□□□ 0.28
ZNF548-209ENST00000598895 EDC4Q6P2E9 1401 aaKnown RBP16.79■□□□□ 0.28
ZNF548-209ENST00000598895 CDK12Q9NYV4 1490 aaPredicted RBP16.79■□□□□ 0.28
ZNF548-209ENST00000598895 VPS72Q15906 364 aa16.78■□□□□ 0.28
ZNF548-209ENST00000598895 ANKRD36BQ8N2N9 1353 aa16.77■□□□□ 0.28
ZNF548-209ENST00000598895 LMO7Q8WWI1 1683 aa16.77■□□□□ 0.28
ZNF548-209ENST00000598895 CPDO75976 1380 aa16.77■□□□□ 0.27
ZNF548-209ENST00000598895 CAMTA1Q9Y6Y1 1673 aa16.76■□□□□ 0.27
ZNF548-209ENST00000598895 USP54Q70EL1 1684 aa16.75■□□□□ 0.27
ZNF548-209ENST00000598895 EVA1CP58658 441 aa16.75■□□□□ 0.27
ZNF548-209ENST00000598895 RGPD5Q99666 1765 aa16.74■□□□□ 0.27
ZNF548-209ENST00000598895 A0A0G2JS52 829 aa16.74■□□□□ 0.27
ZNF548-209ENST00000598895 MYT1Q01538 1121 aa16.74■□□□□ 0.27
ZNF548-209ENST00000598895 KCNH5Q8NCM2 988 aa16.74■□□□□ 0.27
ZNF548-209ENST00000598895 NFAT5O94916 1531 aa16.74■□□□□ 0.27
ZNF548-209ENST00000598895 USP31Q70CQ4 1352 aa16.74■□□□□ 0.27
ZNF548-209ENST00000598895 BRWD3Q6RI45 1802 aa16.73■□□□□ 0.27
ZNF548-209ENST00000598895 KIF20BQ96Q89 1820 aa16.73■□□□□ 0.27
ZNF548-209ENST00000598895 C11orf95C9JLR9 678 aaPredicted RBP16.73■□□□□ 0.27
ZNF548-209ENST00000598895 USP35Q9P2H5 1018 aa16.73■□□□□ 0.27
ZNF548-209ENST00000598895 LTN1O94822 1766 aa16.73■□□□□ 0.27
ZNF548-209ENST00000598895 COL18A1P39060 1754 aa16.73■□□□□ 0.27
ZNF548-209ENST00000598895 FAM98CQ17RN3 349 aaKnown RBP16.72■□□□□ 0.27
ZNF548-209ENST00000598895 OVOS2A0A0J9YW53 1432 aa16.71■□□□□ 0.27
ZNF548-209ENST00000598895 OVOS2Q6IE36 1432 aa16.71■□□□□ 0.27
ZNF548-209ENST00000598895 LARP1Q6PKG0 1096 aaKnown RBP16.71■□□□□ 0.27
ZNF548-209ENST00000598895 CARD14Q9BXL6 1004 aa16.71■□□□□ 0.27
ZNF548-209ENST00000598895 GGNBP2Q9H3C7 697 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms