RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 ADAMTSL3P82987 1691 aa15.73■□□□□ 0.11
SMG9-207ENST00000598860 TCOF1Q13428 1488 aaKnown RBP15.72■□□□□ 0.11
SMG9-207ENST00000598860 PLEKHH2Q8IVE3 1493 aa15.72■□□□□ 0.11
SMG9-207ENST00000598860 KDM5CP41229 1560 aa15.72■□□□□ 0.11
SMG9-207ENST00000598860 MLECQ14165 292 aa15.72■□□□□ 0.11
SMG9-207ENST00000598860 C14orf37Q86TY3 774 aa15.72■□□□□ 0.11
SMG9-207ENST00000598860 STAC3Q96MF2 364 aa15.72■□□□□ 0.11
SMG9-207ENST00000598860 MLH3Q9UHC1 1453 aa15.71■□□□□ 0.11
SMG9-207ENST00000598860 SAMD9LQ8IVG5 1584 aa15.71■□□□□ 0.11
SMG9-207ENST00000598860 C9orf84Q5VXU9 1444 aa15.71■□□□□ 0.11
SMG9-207ENST00000598860 KIAA1107Q9UPP5 1409 aa15.71■□□□□ 0.11
SMG9-207ENST00000598860 IRF6O14896 467 aa15.71■□□□□ 0.11
SMG9-207ENST00000598860 CCDC102AQ96A19 550 aa15.71■□□□□ 0.11
SMG9-207ENST00000598860 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.71■□□□□ 0.11
SMG9-207ENST00000598860 SPAG9O60271 1321 aaKnown RBP15.7■□□□□ 0.1
SMG9-207ENST00000598860 CAMSAP2Q08AD1 1489 aa15.7■□□□□ 0.1
SMG9-207ENST00000598860 HECW2Q9P2P5 1572 aa15.7■□□□□ 0.1
SMG9-207ENST00000598860 ZNF644Q9H582 1327 aaPredicted RBP15.69■□□□□ 0.1
SMG9-207ENST00000598860 MRPL50Q8N5N7 158 aaKnown RBP15.69■□□□□ 0.1
SMG9-207ENST00000598860 DAXXQ9UER7 740 aaPredicted RBP15.69■□□□□ 0.1
SMG9-207ENST00000598860 SYCP2Q9BX26 1530 aa15.68■□□□□ 0.1
SMG9-207ENST00000598860 PTPRMP28827 1452 aa15.68■□□□□ 0.1
SMG9-207ENST00000598860 RBM46Q8TBY0 533 aaKnown RBP15.68■□□□□ 0.1
SMG9-207ENST00000598860 CROCC2H7BZ55 1655 aa15.67■□□□□ 0.1
SMG9-207ENST00000598860 OATP04181 439 aa15.67■□□□□ 0.1
SMG9-207ENST00000598860 IL27Q8NEV9 243 aa15.67■□□□□ 0.1
SMG9-207ENST00000598860 EYA1Q99502 592 aa15.67■□□□□ 0.1
SMG9-207ENST00000598860 ARHGEF5Q12774 1597 aa15.66■□□□□ 0.1
SMG9-207ENST00000598860 SIGLEC1Q9BZZ2 1709 aa15.66■□□□□ 0.1
SMG9-207ENST00000598860 DNMT1P26358 1616 aaKnown RBP15.66■□□□□ 0.1
SMG9-207ENST00000598860 MADDQ8WXG6 1647 aa15.66■□□□□ 0.1
SMG9-207ENST00000598860 PXYLP1Q8TE99 480 aa15.65■□□□□ 0.1
SMG9-207ENST00000598860 DIP2CQ9Y2E4 1556 aa15.65■□□□□ 0.1
SMG9-207ENST00000598860 RSPH4AQ5TD94 716 aa15.64■□□□□ 0.09
SMG9-207ENST00000598860 METTL3Q86U44 580 aaKnown RBP15.64■□□□□ 0.09
SMG9-207ENST00000598860 LAPTM4BQ86VI4 370 aa15.64■□□□□ 0.09
SMG9-207ENST00000598860 KIDINS220Q9ULH0 1771 aa15.64■□□□□ 0.09
SMG9-207ENST00000598860 FAM98CQ17RN3 349 aaKnown RBP15.63■□□□□ 0.09
SMG9-207ENST00000598860 ABCA6Q8N139 1617 aa15.63■□□□□ 0.09
SMG9-207ENST00000598860 RIMS1Q86UR5 1692 aaKnown RBP15.63■□□□□ 0.09
SMG9-207ENST00000598860 SPNS2Q8IVW8 549 aa15.62■□□□□ 0.09
SMG9-207ENST00000598860 ADGBQ8N7X0 1667 aa15.62■□□□□ 0.09
SMG9-207ENST00000598860 REREQ9P2R6 1566 aa15.62■□□□□ 0.09
SMG9-207ENST00000598860 MBD5Q9P267 1494 aa15.61■□□□□ 0.09
SMG9-207ENST00000598860 GOLGA8CPA6NN73 597 aa15.61■□□□□ 0.09
SMG9-207ENST00000598860 TRIM26Q12899 539 aaPredicted RBP15.61■□□□□ 0.09
SMG9-207ENST00000598860 AMHR2Q16671 573 aa15.61■□□□□ 0.09
SMG9-207ENST00000598860 ESF1Q9H501 851 aaKnown RBP15.6■□□□□ 0.09
SMG9-207ENST00000598860 CCDC141Q6ZP82 1450 aa15.59■□□□□ 0.09
SMG9-207ENST00000598860 SHANK2Q9UPX8 1470 aa15.59■□□□□ 0.09
SMG9-207ENST00000598860 AGLP35573 1532 aa15.59■□□□□ 0.09
SMG9-207ENST00000598860 ATP7AQ04656 1500 aa15.59■□□□□ 0.09
SMG9-207ENST00000598860 RCCD1A6NED2 376 aa15.59■□□□□ 0.09
SMG9-207ENST00000598860 FAM50AQ14320 339 aaKnown RBP15.59■□□□□ 0.09
SMG9-207ENST00000598860 ZFRQ96KR1 1074 aaKnown RBP15.59■□□□□ 0.09
SMG9-207ENST00000598860 PHOX2BQ99453 314 aa15.59■□□□□ 0.09
SMG9-207ENST00000598860 MAST1Q9Y2H9 1570 aa15.58■□□□□ 0.09
SMG9-207ENST00000598860 FER1L4A9Z1Z3 1794 aa15.58■□□□□ 0.08
SMG9-207ENST00000598860 TSPY4P0CV99 314 aa15.58■□□□□ 0.08
SMG9-207ENST00000598860 TSPY10P0CW01 314 aa15.58■□□□□ 0.08
SMG9-207ENST00000598860 DNAJB2P25686 324 aa15.57■□□□□ 0.08
SMG9-207ENST00000598860 NLRP7Q8WX94 980 aa15.57■□□□□ 0.08
SMG9-207ENST00000598860 RTEL1-TNFRSF6BF6WH68 1400 aa15.57■□□□□ 0.08
SMG9-207ENST00000598860 DAPK1P53355 1430 aa15.57■□□□□ 0.08
SMG9-207ENST00000598860 PARP9Q8IXQ6 854 aa15.56■□□□□ 0.08
SMG9-207ENST00000598860 FAM117AQ9C073 453 aa15.56■□□□□ 0.08
SMG9-207ENST00000598860 A2MP01023 1474 aa15.56■□□□□ 0.08
SMG9-207ENST00000598860 INO80Q9ULG1 1556 aaPredicted RBP15.55■□□□□ 0.08
SMG9-207ENST00000598860 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.55■□□□□ 0.08
SMG9-207ENST00000598860 CEBPAP49715 358 aaPredicted RBP15.55■□□□□ 0.08
SMG9-207ENST00000598860 ABCC5O15440 1437 aa15.53■□□□□ 0.08
SMG9-207ENST00000598860 PLXNC1O60486 1568 aa15.53■□□□□ 0.08
SMG9-207ENST00000598860 GCC2Q8IWJ2 1684 aa15.52■□□□□ 0.08
SMG9-207ENST00000598860 SWT1Q5T5J6 900 aaKnown RBP15.52■□□□□ 0.08
SMG9-207ENST00000598860 GGT6Q6P531 493 aa15.52■□□□□ 0.08
SMG9-207ENST00000598860 SAMD7Q7Z3H4 446 aa15.52■□□□□ 0.08
SMG9-207ENST00000598860 WNT2BQ93097 391 aa15.52■□□□□ 0.08
SMG9-207ENST00000598860 ADGRL2O95490 1459 aa15.52■□□□□ 0.07
SMG9-207ENST00000598860 DHX29Q7Z478 1369 aaKnown RBP15.51■□□□□ 0.07
SMG9-207ENST00000598860 HDGFP51858 240 aaKnown RBP15.51■□□□□ 0.07
SMG9-207ENST00000598860 ANKK1Q8NFD2 765 aa15.51■□□□□ 0.07
SMG9-207ENST00000598860 KCTD12Q96CX2 325 aaKnown RBP15.51■□□□□ 0.07
SMG9-207ENST00000598860 TMEM134Q9H6X4 195 aa15.51■□□□□ 0.07
SMG9-207ENST00000598860 CNTLNQ9NXG0 1405 aa15.51■□□□□ 0.07
SMG9-207ENST00000598860 KIF3BO15066 747 aa15.49■□□□□ 0.07
SMG9-207ENST00000598860 MDM2Q00987 491 aaPredicted RBP15.49■□□□□ 0.07
SMG9-207ENST00000598860 TTLL12Q14166 644 aaPredicted RBP15.49■□□□□ 0.07
SMG9-207ENST00000598860 DDRGK1Q96HY6 314 aa15.49■□□□□ 0.07
SMG9-207ENST00000598860 SETD1BQ9UPS6 1966 aaKnown RBP15.49■□□□□ 0.07
SMG9-207ENST00000598860 ROCK1Q13464 1354 aa15.49■□□□□ 0.07
SMG9-207ENST00000598860 PLEKHG3A1L390 1219 aa15.48■□□□□ 0.07
SMG9-207ENST00000598860 LRCH3Q96II8 777 aa15.48■□□□□ 0.07
SMG9-207ENST00000598860 LMTK3Q96Q04 1460 aa15.47■□□□□ 0.07
SMG9-207ENST00000598860 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.47■□□□□ 0.07
SMG9-207ENST00000598860 ANKRD30AQ9BXX3 1397 aa15.47■□□□□ 0.07
SMG9-207ENST00000598860 PTPRKQ15262 1439 aa15.46■□□□□ 0.07
SMG9-207ENST00000598860 HSPA2P54652 639 aa15.46■□□□□ 0.07
SMG9-207ENST00000598860 ZMYM3Q14202 1370 aa15.46■□□□□ 0.07
SMG9-207ENST00000598860 RNF40O75150 1001 aa15.45■□□□□ 0.06
SMG9-207ENST00000598860 ITGAEP38570 1179 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms