RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 GRIN3BO60391 1043 aa7.04□□□□□ -1.28
HERC3-213ENST00000598772 NPM3O75607 178 aaKnown RBP7.04□□□□□ -1.28
HERC3-213ENST00000598772 FAM161AQ3B820 660 aa7.04□□□□□ -1.28
HERC3-213ENST00000598772 MTFR1LQ9H019 292 aa7.04□□□□□ -1.28
HERC3-213ENST00000598772 DLC1Q96QB1 1528 aa7.04□□□□□ -1.28
HERC3-213ENST00000598772 SPATA31A5Q5VU36 1347 aa7.03□□□□□ -1.28
HERC3-213ENST00000598772 SPATA31A7Q8IWB4 1347 aa7.03□□□□□ -1.28
HERC3-213ENST00000598772 EEA1Q15075 1411 aa7.03□□□□□ -1.28
HERC3-213ENST00000598772 CHIC2Q9UKJ5 165 aa7.03□□□□□ -1.28
HERC3-213ENST00000598772 NUP188Q5SRE5 1749 aa7.03□□□□□ -1.28
HERC3-213ENST00000598772 SHANK3Q9BYB0 1731 aa7.03□□□□□ -1.28
HERC3-213ENST00000598772 KIF15Q9NS87 1388 aa7.03□□□□□ -1.28
HERC3-213ENST00000598772 FYCO1Q9BQS8 1478 aa7.03□□□□□ -1.28
HERC3-213ENST00000598772 GOLGB1Q14789 3259 aaKnown RBP7.02□□□□□ -1.29
HERC3-213ENST00000598772 EIF2AK4Q9P2K8 1649 aaKnown RBP7.02□□□□□ -1.29
HERC3-213ENST00000598772 PSME1Q06323 249 aa7.02□□□□□ -1.29
HERC3-213ENST00000598772 KLRG1Q96E93 195 aa7.02□□□□□ -1.29
HERC3-213ENST00000598772 PXDNQ92626 1479 aa7.02□□□□□ -1.29
HERC3-213ENST00000598772 DUOX2Q9NRD8 1548 aa7.01□□□□□ -1.29
HERC3-213ENST00000598772 EVA1CP58658 441 aa7.01□□□□□ -1.29
HERC3-213ENST00000598772 NLGN2Q8NFZ4 835 aa7.01□□□□□ -1.29
HERC3-213ENST00000598772 GCC2Q8IWJ2 1684 aa7□□□□□ -1.29
HERC3-213ENST00000598772 ADGRL2O95490 1459 aa7□□□□□ -1.29
HERC3-213ENST00000598772 YBX3P16989 372 aaKnown RBP eCLIP7□□□□□ -1.29
HERC3-213ENST00000598772 SLC15A2Q16348 729 aa7□□□□□ -1.29
HERC3-213ENST00000598772 NALCNQ8IZF0 1738 aa7□□□□□ -1.29
HERC3-213ENST00000598772 USP32Q8NFA0 1604 aa7□□□□□ -1.29
HERC3-213ENST00000598772 PTPN23Q9H3S7 1636 aa7□□□□□ -1.29
HERC3-213ENST00000598772 TMEM131LA2VDJ0 1609 aa6.99□□□□□ -1.29
HERC3-213ENST00000598772 KIF3CO14782 793 aa6.99□□□□□ -1.29
HERC3-213ENST00000598772 HSPA1AP0DMV8 641 aaKnown RBP6.99□□□□□ -1.29
HERC3-213ENST00000598772 HSPA1BP0DMV9 641 aaKnown RBP6.99□□□□□ -1.29
HERC3-213ENST00000598772 POLD1P28340 1107 aa6.99□□□□□ -1.29
HERC3-213ENST00000598772 POLA2Q14181 598 aa6.99□□□□□ -1.29
HERC3-213ENST00000598772 PLCH1Q4KWH8 1693 aa6.99□□□□□ -1.29
HERC3-213ENST00000598772 RREB1Q92766 1687 aa6.99□□□□□ -1.29
HERC3-213ENST00000598772 LAMC1P11047 1609 aa6.98□□□□□ -1.29
HERC3-213ENST00000598772 AATKQ6ZMQ8 1374 aa6.98□□□□□ -1.29
HERC3-213ENST00000598772 CHRNA2Q15822 529 aa6.98□□□□□ -1.29
HERC3-213ENST00000598772 PTF1AQ7RTS3 328 aa6.98□□□□□ -1.29
HERC3-213ENST00000598772 JMYQ8N9B5 988 aa6.98□□□□□ -1.29
HERC3-213ENST00000598772 SGIP1Q9BQI5 828 aa6.98□□□□□ -1.29
HERC3-213ENST00000598772 PRDM11Q9NQV5 511 aa6.98□□□□□ -1.29
HERC3-213ENST00000598772 PCNTO95613 3336 aa6.98□□□□□ -1.29
HERC3-213ENST00000598772 ARHGEF5Q12774 1597 aa6.98□□□□□ -1.29
HERC3-213ENST00000598772 SPATA31A1Q5TZJ5 1347 aa6.98□□□□□ -1.29
HERC3-213ENST00000598772 ROBO2Q9HCK4 1378 aa6.97□□□□□ -1.29
HERC3-213ENST00000598772 PLSCR1O15162 318 aa6.97□□□□□ -1.29
HERC3-213ENST00000598772 CEP162Q5TB80 1403 aa6.97□□□□□ -1.29
HERC3-213ENST00000598772 SAMD1Q6SPF0 538 aaPredicted RBP6.97□□□□□ -1.29
HERC3-213ENST00000598772 C16orf71Q8IYS4 520 aaPredicted RBP6.97□□□□□ -1.29
HERC3-213ENST00000598772 XRN1Q8IZH2 1706 aaKnown RBP6.97□□□□□ -1.29
HERC3-213ENST00000598772 PROM2Q8N271 834 aa6.97□□□□□ -1.29
HERC3-213ENST00000598772 STK26Q9P289 416 aa6.97□□□□□ -1.29
HERC3-213ENST00000598772 NWD2Q9ULI1 1742 aa6.97□□□□□ -1.29
HERC3-213ENST00000598772 TOMM70O94826 608 aa6.96□□□□□ -1.3
HERC3-213ENST00000598772 PMFBP1Q8TBY8 1022 aa6.96□□□□□ -1.3
HERC3-213ENST00000598772 CASZ1Q86V15 1759 aa6.95□□□□□ -1.3
HERC3-213ENST00000598772 ERBINQ96RT1 1412 aa6.95□□□□□ -1.3
HERC3-213ENST00000598772 MLLT1Q03111 559 aaPredicted RBP6.95□□□□□ -1.3
HERC3-213ENST00000598772 TXNRD1Q16881 649 aa6.95□□□□□ -1.3
HERC3-213ENST00000598772 WAPLQ7Z5K2 1190 aa6.95□□□□□ -1.3
HERC3-213ENST00000598772 PHF8Q9UPP1 1060 aa6.95□□□□□ -1.3
HERC3-213ENST00000598772 CCDC144AA2RUR9 1427 aa6.94□□□□□ -1.3
HERC3-213ENST00000598772 TNS3Q68CZ2 1445 aa6.94□□□□□ -1.3
HERC3-213ENST00000598772 PAK3O75914 559 aaPredicted RBP6.94□□□□□ -1.3
HERC3-213ENST00000598772 MAP3K5Q99683 1374 aa6.94□□□□□ -1.3
HERC3-213ENST00000598772 TECPR2O15040 1411 aa6.93□□□□□ -1.3
HERC3-213ENST00000598772 TNS2Q63HR2 1409 aa6.93□□□□□ -1.3
HERC3-213ENST00000598772 LMTK2Q8IWU2 1503 aa6.93□□□□□ -1.3
HERC3-213ENST00000598772 SLC4A2P04920 1241 aa6.93□□□□□ -1.3
HERC3-213ENST00000598772 PRKAR2AP13861 404 aaKnown RBP6.93□□□□□ -1.3
HERC3-213ENST00000598772 ZC3H6P61129 1189 aaKnown RBP6.93□□□□□ -1.3
HERC3-213ENST00000598772 CFAP44Q96MT7 982 aa6.93□□□□□ -1.3
HERC3-213ENST00000598772 ARHGEF10O15013 1369 aa6.93□□□□□ -1.3
HERC3-213ENST00000598772 CCDC85CA6NKD9 419 aa6.92□□□□□ -1.3
HERC3-213ENST00000598772 POTEB2H3BUK9 544 aa6.92□□□□□ -1.3
HERC3-213ENST00000598772 LARP1Q6PKG0 1096 aaKnown RBP6.92□□□□□ -1.3
HERC3-213ENST00000598772 TCP11L2Q8N4U5 519 aa6.92□□□□□ -1.3
HERC3-213ENST00000598772 ABCC5O15440 1437 aa6.92□□□□□ -1.3
HERC3-213ENST00000598772 THSD7AQ9UPZ6 1657 aa6.91□□□□□ -1.3
HERC3-213ENST00000598772 ZBTB7CA1YPR0 619 aa6.91□□□□□ -1.3
HERC3-213ENST00000598772 LCE2DQ5TA82 110 aaPredicted RBP6.91□□□□□ -1.3
HERC3-213ENST00000598772 BARGINQ6ZT62 677 aa6.91□□□□□ -1.3
HERC3-213ENST00000598772 NMRK2Q9NPI5 230 aa6.91□□□□□ -1.3
HERC3-213ENST00000598772 NAIPQ13075 1403 aa6.91□□□□□ -1.3
HERC3-213ENST00000598772 C11orf95C9JLR9 678 aaPredicted RBP6.9□□□□□ -1.3
HERC3-213ENST00000598772 ANKRD30AQ9BXX3 1397 aa6.9□□□□□ -1.31
HERC3-213ENST00000598772 MYOM3Q5VTT5 1437 aa6.9□□□□□ -1.31
HERC3-213ENST00000598772 NRAPQ86VF7 1730 aa6.9□□□□□ -1.31
HERC3-213ENST00000598772 NUTM2GQ5VZR2 741 aa6.89□□□□□ -1.31
HERC3-213ENST00000598772 SBNO1A3KN83 1393 aa6.89□□□□□ -1.31
HERC3-213ENST00000598772 HFM1A2PYH4 1435 aa6.89□□□□□ -1.31
HERC3-213ENST00000598772 NRXN3Q9Y4C0 1643 aa6.89□□□□□ -1.31
HERC3-213ENST00000598772 COL14A1Q05707 1796 aaKnown RBP6.88□□□□□ -1.31
HERC3-213ENST00000598772 WDR90Q96KV7 1748 aa6.88□□□□□ -1.31
HERC3-213ENST00000598772 NEXMIFQ5QGS0 1516 aa6.88□□□□□ -1.31
HERC3-213ENST00000598772 RRBP1Q9P2E9 1410 aaKnown RBP6.88□□□□□ -1.31
HERC3-213ENST00000598772 KIAA0232Q92628 1395 aa6.88□□□□□ -1.31
HERC3-213ENST00000598772 USP19O94966 1318 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms