RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 ABCA3Q99758 1704 aa24.89■■□□□ 1.58
USHBP1-209ENST00000598570 MEX3CQ5U5Q3 659 aaKnown RBP24.89■■□□□ 1.58
USHBP1-209ENST00000598570 USP6P35125 1406 aa24.88■■□□□ 1.57
USHBP1-209ENST00000598570 AKAP12Q02952 1782 aa24.88■■□□□ 1.57
USHBP1-209ENST00000598570 CD163L1Q9NR16 1453 aa24.87■■□□□ 1.57
USHBP1-209ENST00000598570 AFF2P51816 1311 aa24.86■■□□□ 1.57
USHBP1-209ENST00000598570 ADAMTS2O95450 1211 aa24.85■■□□□ 1.57
USHBP1-209ENST00000598570 BCL9LQ86UU0 1499 aa24.84■■□□□ 1.57
USHBP1-209ENST00000598570 C8orf37Q96NL8 207 aa24.84■■□□□ 1.57
USHBP1-209ENST00000598570 SLIT2O94813 1529 aa24.84■■□□□ 1.57
USHBP1-209ENST00000598570 CABLES1Q8TDN4 633 aa24.83■■□□□ 1.57
USHBP1-209ENST00000598570 NGLY1Q96IV0 654 aa24.83■■□□□ 1.57
USHBP1-209ENST00000598570 USP19O94966 1318 aa24.83■■□□□ 1.56
USHBP1-209ENST00000598570 NINLQ9Y2I6 1382 aa24.82■■□□□ 1.56
USHBP1-209ENST00000598570 PAK3O75914 559 aaPredicted RBP24.8■■□□□ 1.56
USHBP1-209ENST00000598570 MON2Q7Z3U7 1717 aa24.8■■□□□ 1.56
USHBP1-209ENST00000598570 NRKQ7Z2Y5 1582 aa24.8■■□□□ 1.56
USHBP1-209ENST00000598570 TMF1P82094 1093 aa24.79■■□□□ 1.56
USHBP1-209ENST00000598570 LMOD2Q6P5Q4 547 aa24.79■■□□□ 1.56
USHBP1-209ENST00000598570 SLC12A5Q9H2X9 1139 aa24.79■■□□□ 1.56
USHBP1-209ENST00000598570 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.78■■□□□ 1.56
USHBP1-209ENST00000598570 FAM83GA6ND36 823 aa24.78■■□□□ 1.56
USHBP1-209ENST00000598570 TTC21BQ7Z4L5 1316 aa24.78■■□□□ 1.56
USHBP1-209ENST00000598570 ATRNO75882 1429 aa24.78■■□□□ 1.56
USHBP1-209ENST00000598570 CDK12Q9NYV4 1490 aaPredicted RBP24.77■■□□□ 1.56
USHBP1-209ENST00000598570 ABTB2Q8N961 1025 aa24.77■■□□□ 1.56
USHBP1-209ENST00000598570 TTC21AQ8NDW8 1320 aa24.77■■□□□ 1.56
USHBP1-209ENST00000598570 NWD2Q9ULI1 1742 aa24.77■■□□□ 1.56
USHBP1-209ENST00000598570 QTRT2Q9H974 415 aaKnown RBP24.76■■□□□ 1.55
USHBP1-209ENST00000598570 USP21Q9UK80 565 aa24.76■■□□□ 1.55
USHBP1-209ENST00000598570 PHRF1Q9P1Y6 1649 aaKnown RBP24.75■■□□□ 1.55
USHBP1-209ENST00000598570 CDCA8Q53HL2 280 aa24.75■■□□□ 1.55
USHBP1-209ENST00000598570 NLRP13Q86W25 1043 aa24.75■■□□□ 1.55
USHBP1-209ENST00000598570 KTN1Q86UP2 1357 aaKnown RBP24.75■■□□□ 1.55
USHBP1-209ENST00000598570 PIK3C2AO00443 1686 aa24.75■■□□□ 1.55
USHBP1-209ENST00000598570 SOCS7O14512 581 aa24.74■■□□□ 1.55
USHBP1-209ENST00000598570 EIF4G2P78344 907 aaKnown RBP eCLIP24.74■■□□□ 1.55
USHBP1-209ENST00000598570 CPDO75976 1380 aa24.74■■□□□ 1.55
USHBP1-209ENST00000598570 USP54Q70EL1 1684 aa24.73■■□□□ 1.55
USHBP1-209ENST00000598570 SLIT3O75094 1523 aa24.73■■□□□ 1.55
USHBP1-209ENST00000598570 USP31Q70CQ4 1352 aa24.73■■□□□ 1.55
USHBP1-209ENST00000598570 UNC5CLQ8IV45 518 aa24.73■■□□□ 1.55
USHBP1-209ENST00000598570 TERF2IPQ9NYB0 399 aa24.73■■□□□ 1.55
USHBP1-209ENST00000598570 TRPC5Q9UL62 973 aaPredicted RBP24.73■■□□□ 1.55
USHBP1-209ENST00000598570 COL14A1Q05707 1796 aaKnown RBP24.72■■□□□ 1.55
USHBP1-209ENST00000598570 RXRBP28702 533 aa24.72■■□□□ 1.55
USHBP1-209ENST00000598570 RBM6P78332 1123 aaKnown RBP24.72■■□□□ 1.55
USHBP1-209ENST00000598570 EDC4Q6P2E9 1401 aaKnown RBP24.71■■□□□ 1.55
USHBP1-209ENST00000598570 A0A1W2PP64 1363 aa24.71■■□□□ 1.55
USHBP1-209ENST00000598570 PLCH1Q4KWH8 1693 aa24.7■■□□□ 1.54
USHBP1-209ENST00000598570 GCP02774 474 aa24.7■■□□□ 1.54
USHBP1-209ENST00000598570 HSPA5P11021 654 aaKnown RBP24.7■■□□□ 1.54
USHBP1-209ENST00000598570 HDGFL2Q7Z4V5 671 aaPredicted RBP24.69■■□□□ 1.54
USHBP1-209ENST00000598570 ANKRD36BQ8N2N9 1353 aa24.68■■□□□ 1.54
USHBP1-209ENST00000598570 HAP1P54257 671 aaPredicted RBP24.68■■□□□ 1.54
USHBP1-209ENST00000598570 NUTM2GQ5VZR2 741 aa24.68■■□□□ 1.54
USHBP1-209ENST00000598570 TMC1Q8TDI8 760 aa24.68■■□□□ 1.54
USHBP1-209ENST00000598570 NRAPQ86VF7 1730 aa24.67■■□□□ 1.54
USHBP1-209ENST00000598570 NLRP6P59044 892 aa24.67■■□□□ 1.54
USHBP1-209ENST00000598570 VPS72Q15906 364 aa24.67■■□□□ 1.54
USHBP1-209ENST00000598570 KIAA0232Q92628 1395 aa24.67■■□□□ 1.54
USHBP1-209ENST00000598570 ONECUT3O60422 494 aaPredicted RBP24.66■■□□□ 1.54
USHBP1-209ENST00000598570 GJD4Q96KN9 370 aaPredicted RBP24.65■■□□□ 1.54
USHBP1-209ENST00000598570 MYOM1P52179 1685 aa24.64■■□□□ 1.53
USHBP1-209ENST00000598570 LMO7Q8WWI1 1683 aa24.64■■□□□ 1.53
USHBP1-209ENST00000598570 PRDM11Q9NQV5 511 aa24.62■■□□□ 1.53
USHBP1-209ENST00000598570 NFAT5O94916 1531 aa24.61■■□□□ 1.53
USHBP1-209ENST00000598570 KCNH5Q8NCM2 988 aa24.61■■□□□ 1.53
USHBP1-209ENST00000598570 BTG4Q9NY30 223 aa24.61■■□□□ 1.53
USHBP1-209ENST00000598570 AATKQ6ZMQ8 1374 aa24.61■■□□□ 1.53
USHBP1-209ENST00000598570 GLI3P10071 1580 aa24.61■■□□□ 1.53
USHBP1-209ENST00000598570 COL18A1P39060 1754 aa24.61■■□□□ 1.53
USHBP1-209ENST00000598570 ZC3H6P61129 1189 aaKnown RBP24.6■■□□□ 1.53
USHBP1-209ENST00000598570 ARHGEF25Q86VW2 580 aa24.6■■□□□ 1.53
USHBP1-209ENST00000598570 CAMTA1Q9Y6Y1 1673 aa24.59■■□□□ 1.53
USHBP1-209ENST00000598570 NME9Q86XW9 330 aa24.59■■□□□ 1.53
USHBP1-209ENST00000598570 OVOS2A0A0J9YW53 1432 aa24.59■■□□□ 1.53
USHBP1-209ENST00000598570 RGS12O14924 1447 aa24.59■■□□□ 1.53
USHBP1-209ENST00000598570 OVOS2Q6IE36 1432 aa24.59■■□□□ 1.53
USHBP1-209ENST00000598570 C11orf95C9JLR9 678 aaPredicted RBP24.58■■□□□ 1.53
USHBP1-209ENST00000598570 PLEKHG5O94827 1062 aa24.58■■□□□ 1.53
USHBP1-209ENST00000598570 CARD14Q9BXL6 1004 aa24.58■■□□□ 1.53
USHBP1-209ENST00000598570 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.57■■□□□ 1.52
USHBP1-209ENST00000598570 ZRANB1Q9UGI0 708 aa24.57■■□□□ 1.52
USHBP1-209ENST00000598570 CHRNA2Q15822 529 aa24.56■■□□□ 1.52
USHBP1-209ENST00000598570 SPATA31A5Q5VU36 1347 aa24.56■■□□□ 1.52
USHBP1-209ENST00000598570 SPATA31A7Q8IWB4 1347 aa24.56■■□□□ 1.52
USHBP1-209ENST00000598570 ABCC6O95255 1503 aa24.56■■□□□ 1.52
USHBP1-209ENST00000598570 FYB1O15117 783 aa24.54■■□□□ 1.52
USHBP1-209ENST00000598570 AXIN2Q9Y2T1 843 aa24.5■■□□□ 1.51
USHBP1-209ENST00000598570 SPATA31A1Q5TZJ5 1347 aa24.5■■□□□ 1.51
USHBP1-209ENST00000598570 COL5A2P05997 1499 aaPredicted RBP24.5■■□□□ 1.51
USHBP1-209ENST00000598570 KIF7Q2M1P5 1343 aa24.45■■□□□ 1.5
USHBP1-209ENST00000598570 BARGINQ6ZT62 677 aa24.45■■□□□ 1.5
USHBP1-209ENST00000598570 COG3Q96JB2 828 aa24.45■■□□□ 1.5
USHBP1-209ENST00000598570 THSD7AQ9UPZ6 1657 aa24.45■■□□□ 1.5
USHBP1-209ENST00000598570 LARP1Q6PKG0 1096 aaKnown RBP24.44■■□□□ 1.5
USHBP1-209ENST00000598570 SEPT12Q8IYM1 358 aa24.43■■□□□ 1.5
USHBP1-209ENST00000598570 THRAP3Q9Y2W1 955 aaKnown RBP24.43■■□□□ 1.5
USHBP1-209ENST00000598570 RGPD5Q99666 1765 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms