RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 GSE1Q14687 1217 aa14.33□□□□□ -0.12
LINC00343-205ENST00000598229 TMEM106CQ9BVX2 250 aa14.33□□□□□ -0.12
LINC00343-205ENST00000598229 PYGBP11216 843 aa14.32□□□□□ -0.12
LINC00343-205ENST00000598229 ZNF326Q5BKZ1 582 aaKnown RBP14.32□□□□□ -0.12
LINC00343-205ENST00000598229 NUP155O75694 1391 aa14.32□□□□□ -0.12
LINC00343-205ENST00000598229 MYOM2P54296 1465 aa14.31□□□□□ -0.12
LINC00343-205ENST00000598229 NPHP3Q7Z494 1330 aa14.31□□□□□ -0.12
LINC00343-205ENST00000598229 ROCK1Q13464 1354 aa14.31□□□□□ -0.12
LINC00343-205ENST00000598229 COL22A1Q8NFW1 1626 aaPredicted RBP14.3□□□□□ -0.12
LINC00343-205ENST00000598229 IQGAP3Q86VI3 1631 aa14.3□□□□□ -0.12
LINC00343-205ENST00000598229 SF3B2Q13435 895 aaKnown RBP14.29□□□□□ -0.12
LINC00343-205ENST00000598229 UNC5CLQ8IV45 518 aa14.29□□□□□ -0.12
LINC00343-205ENST00000598229 PRAG1Q86YV5 1406 aa14.28□□□□□ -0.12
LINC00343-205ENST00000598229 NALCNQ8IZF0 1738 aa14.28□□□□□ -0.12
LINC00343-205ENST00000598229 COLQQ9Y215 455 aaPredicted RBP14.28□□□□□ -0.12
LINC00343-205ENST00000598229 ROBO2Q9HCK4 1378 aa14.27□□□□□ -0.12
LINC00343-205ENST00000598229 DEFB132Q7Z7B7 95 aa14.27□□□□□ -0.13
LINC00343-205ENST00000598229 VGFO15240 615 aaPredicted RBP14.26□□□□□ -0.13
LINC00343-205ENST00000598229 ONECUT3O60422 494 aaPredicted RBP14.26□□□□□ -0.13
LINC00343-205ENST00000598229 LRP5O75197 1615 aa14.26□□□□□ -0.13
LINC00343-205ENST00000598229 HFM1A2PYH4 1435 aa14.25□□□□□ -0.13
LINC00343-205ENST00000598229 ESCO1Q5FWF5 840 aa14.25□□□□□ -0.13
LINC00343-205ENST00000598229 RALGAPBQ86X10 1494 aa14.25□□□□□ -0.13
LINC00343-205ENST00000598229 LRPPRCP42704 1394 aaKnown RBP14.24□□□□□ -0.13
LINC00343-205ENST00000598229 FOXO3O43524 673 aa14.24□□□□□ -0.13
LINC00343-205ENST00000598229 PXDNQ92626 1479 aa14.24□□□□□ -0.13
LINC00343-205ENST00000598229 HRCP23327 699 aa14.23□□□□□ -0.13
LINC00343-205ENST00000598229 SEPT12Q8IYM1 358 aa14.23□□□□□ -0.13
LINC00343-205ENST00000598229 SLIT2O94813 1529 aa14.23□□□□□ -0.13
LINC00343-205ENST00000598229 NEXMIFQ5QGS0 1516 aa14.22□□□□□ -0.13
LINC00343-205ENST00000598229 VPS72Q15906 364 aa14.21□□□□□ -0.13
LINC00343-205ENST00000598229 ZNF467Q7Z7K2 595 aaPredicted RBP14.21□□□□□ -0.13
LINC00343-205ENST00000598229 RPGRIP1LQ68CZ1 1315 aa14.2□□□□□ -0.14
LINC00343-205ENST00000598229 PLCG2P16885 1265 aa14.2□□□□□ -0.14
LINC00343-205ENST00000598229 KRT27Q7Z3Y8 459 aa14.2□□□□□ -0.14
LINC00343-205ENST00000598229 PCDHB8Q9UN66 801 aa14.2□□□□□ -0.14
LINC00343-205ENST00000598229 GLI3P10071 1580 aa14.2□□□□□ -0.14
LINC00343-205ENST00000598229 SPHKAPQ2M3C7 1700 aa14.2□□□□□ -0.14
LINC00343-205ENST00000598229 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.2□□□□□ -0.14
LINC00343-205ENST00000598229 SPATA31A3Q5VYP0 1347 aa14.19□□□□□ -0.14
LINC00343-205ENST00000598229 POTEMA6NI47 508 aa14.19□□□□□ -0.14
LINC00343-205ENST00000598229 BAG6P46379 1132 aa14.19□□□□□ -0.14
LINC00343-205ENST00000598229 XPCQ01831 940 aaPredicted RBP14.19□□□□□ -0.14
LINC00343-205ENST00000598229 MARF1Q9Y4F3 1742 aaKnown RBP14.18□□□□□ -0.14
LINC00343-205ENST00000598229 CHRM1P11229 460 aaPredicted RBP14.18□□□□□ -0.14
LINC00343-205ENST00000598229 PSDA5PKW4 1024 aaPredicted RBP14.17□□□□□ -0.14
LINC00343-205ENST00000598229 SPOCK2Q92563 424 aa14.16□□□□□ -0.14
LINC00343-205ENST00000598229 CDC42BPGQ6DT37 1551 aa14.16□□□□□ -0.14
LINC00343-205ENST00000598229 IRX5P78411 483 aaPredicted RBP14.15□□□□□ -0.14
LINC00343-205ENST00000598229 POTEGQ6S5H5 508 aa14.15□□□□□ -0.14
LINC00343-205ENST00000598229 KRT28Q7Z3Y7 464 aa14.14□□□□□ -0.15
LINC00343-205ENST00000598229 CCDC144AA2RUR9 1427 aa14.14□□□□□ -0.15
LINC00343-205ENST00000598229 CLTCL1P53675 1640 aa14.13□□□□□ -0.15
LINC00343-205ENST00000598229 NAIPQ13075 1403 aa14.13□□□□□ -0.15
LINC00343-205ENST00000598229 PSME1Q06323 249 aa14.12□□□□□ -0.15
LINC00343-205ENST00000598229 IFNLR1Q8IU57 520 aaPredicted RBP14.12□□□□□ -0.15
LINC00343-205ENST00000598229 OCEL1Q9H607 264 aa14.12□□□□□ -0.15
LINC00343-205ENST00000598229 CCDC9Q9Y3X0 531 aaKnown RBP14.12□□□□□ -0.15
LINC00343-205ENST00000598229 BRWD3Q6RI45 1802 aa14.11□□□□□ -0.15
LINC00343-205ENST00000598229 HAP1P54257 671 aaPredicted RBP14.11□□□□□ -0.15
LINC00343-205ENST00000598229 TECPR2O15040 1411 aa14.1□□□□□ -0.15
LINC00343-205ENST00000598229 EN1Q05925 392 aaPredicted RBP14.1□□□□□ -0.15
LINC00343-205ENST00000598229 R3HDM1Q15032 1099 aaKnown RBP14.1□□□□□ -0.15
LINC00343-205ENST00000598229 WAPLQ7Z5K2 1190 aa14.1□□□□□ -0.15
LINC00343-205ENST00000598229 USP32Q8NFA0 1604 aa14.1□□□□□ -0.15
LINC00343-205ENST00000598229 ABCC11Q96J66 1382 aa14.09□□□□□ -0.15
LINC00343-205ENST00000598229 NUTM2FA1L443 756 aa14.09□□□□□ -0.15
LINC00343-205ENST00000598229 FAM83GA6ND36 823 aa14.09□□□□□ -0.15
LINC00343-205ENST00000598229 FAM163AQ96GL9 167 aaPredicted RBP14.09□□□□□ -0.15
LINC00343-205ENST00000598229 DISP2A7MBM2 1401 aa14.08□□□□□ -0.15
LINC00343-205ENST00000598229 YY1P25490 414 aa14.08□□□□□ -0.16
LINC00343-205ENST00000598229 ITGAEP38570 1179 aa14.08□□□□□ -0.16
LINC00343-205ENST00000598229 CABLES1Q8TDN4 633 aa14.08□□□□□ -0.16
LINC00343-205ENST00000598229 SIRT1Q96EB6 747 aa14.08□□□□□ -0.16
LINC00343-205ENST00000598229 SBNO1A3KN83 1393 aa14.08□□□□□ -0.16
LINC00343-205ENST00000598229 TNS3Q68CZ2 1445 aa14.07□□□□□ -0.16
LINC00343-205ENST00000598229 KIF1BO60333 1816 aa14.07□□□□□ -0.16
LINC00343-205ENST00000598229 GOLGA2Q08379 1002 aa14.07□□□□□ -0.16
LINC00343-205ENST00000598229 FAM98CQ17RN3 349 aaKnown RBP14.07□□□□□ -0.16
LINC00343-205ENST00000598229 PHF8Q9UPP1 1060 aa14.07□□□□□ -0.16
LINC00343-205ENST00000598229 ARHGEF10O15013 1369 aa14.07□□□□□ -0.16
LINC00343-205ENST00000598229 NWD2Q9ULI1 1742 aa14.07□□□□□ -0.16
LINC00343-205ENST00000598229 A0A0G2JS52 829 aa14.06□□□□□ -0.16
LINC00343-205ENST00000598229 MYT1Q01538 1121 aa14.06□□□□□ -0.16
LINC00343-205ENST00000598229 PLSCR2Q9NRY7 297 aa14.06□□□□□ -0.16
LINC00343-205ENST00000598229 STK26Q9P289 416 aa14.06□□□□□ -0.16
LINC00343-205ENST00000598229 PCDH10Q9P2E7 1040 aa14.06□□□□□ -0.16
LINC00343-205ENST00000598229 CIZ1Q9ULV3 898 aaPredicted RBP14.05□□□□□ -0.16
LINC00343-205ENST00000598229 KIF1AQ12756 1690 aa14.04□□□□□ -0.16
LINC00343-205ENST00000598229 SLAIN1Q8ND83 568 aa14.04□□□□□ -0.16
LINC00343-205ENST00000598229 CAMKK2Q96RR4 588 aa14.04□□□□□ -0.16
LINC00343-205ENST00000598229 LCE2DQ5TA82 110 aaPredicted RBP14.03□□□□□ -0.16
LINC00343-205ENST00000598229 ADGRF5Q8IZF2 1346 aa14.03□□□□□ -0.16
LINC00343-205ENST00000598229 PARD3Q8TEW0 1356 aa14.02□□□□□ -0.17
LINC00343-205ENST00000598229 PLEKHH1Q9ULM0 1364 aa14.02□□□□□ -0.17
LINC00343-205ENST00000598229 SPATA31A5Q5VU36 1347 aa14.02□□□□□ -0.17
LINC00343-205ENST00000598229 SPATA31A7Q8IWB4 1347 aa14.02□□□□□ -0.17
LINC00343-205ENST00000598229 PSEN1P49768 467 aa14.02□□□□□ -0.17
LINC00343-205ENST00000598229 MKRN3Q13064 507 aaKnown RBP14.02□□□□□ -0.17
LINC00343-205ENST00000598229 EZH2Q15910 746 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms