RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 ANKRD36BQ8N2N9 1353 aa19.92■□□□□ 0.78
VRK3-213ENST00000597215 A0A1W2PP64 1363 aa19.91■□□□□ 0.78
VRK3-213ENST00000597215 ALS2Q96Q42 1657 aa19.91■□□□□ 0.78
VRK3-213ENST00000597215 PAK3O75914 559 aaPredicted RBP19.9■□□□□ 0.78
VRK3-213ENST00000597215 ARHGEF10O15013 1369 aa19.9■□□□□ 0.78
VRK3-213ENST00000597215 PNPLA6Q8IY17 1366 aa19.9■□□□□ 0.78
VRK3-213ENST00000597215 NRKQ7Z2Y5 1582 aa19.9■□□□□ 0.78
VRK3-213ENST00000597215 COL22A1Q8NFW1 1626 aaPredicted RBP19.89■□□□□ 0.77
VRK3-213ENST00000597215 CCDC7Q96M83 1385 aa19.89■□□□□ 0.77
VRK3-213ENST00000597215 EDC4Q6P2E9 1401 aaKnown RBP19.88■□□□□ 0.77
VRK3-213ENST00000597215 SSH2Q76I76 1423 aa19.88■□□□□ 0.77
VRK3-213ENST00000597215 LMOD2Q6P5Q4 547 aa19.88■□□□□ 0.77
VRK3-213ENST00000597215 SPATA31A6Q5VVP1 1343 aa19.86■□□□□ 0.77
VRK3-213ENST00000597215 WASHC2AQ641Q2 1341 aa19.86■□□□□ 0.77
VRK3-213ENST00000597215 TTC21BQ7Z4L5 1316 aa19.86■□□□□ 0.77
VRK3-213ENST00000597215 TTC21AQ8NDW8 1320 aa19.85■□□□□ 0.77
VRK3-213ENST00000597215 MED1Q15648 1581 aaPredicted RBP19.83■□□□□ 0.77
VRK3-213ENST00000597215 ABTB2Q8N961 1025 aa19.83■□□□□ 0.77
VRK3-213ENST00000597215 PIK3C2AO00443 1686 aa19.83■□□□□ 0.76
VRK3-213ENST00000597215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.81■□□□□ 0.76
VRK3-213ENST00000597215 ABCA3Q99758 1704 aa19.81■□□□□ 0.76
VRK3-213ENST00000597215 NSD3Q9BZ95 1437 aa19.8■□□□□ 0.76
VRK3-213ENST00000597215 PANK3Q9H999 370 aa19.8■□□□□ 0.76
VRK3-213ENST00000597215 NUTM2BA6NNL0 878 aaPredicted RBP19.79■□□□□ 0.76
VRK3-213ENST00000597215 NUTM2EB1AL46 878 aaPredicted RBP19.79■□□□□ 0.76
VRK3-213ENST00000597215 NUTM2GQ5VZR2 741 aa19.79■□□□□ 0.76
VRK3-213ENST00000597215 NLRP13Q86W25 1043 aa19.79■□□□□ 0.76
VRK3-213ENST00000597215 NUTM2AQ8IVF1 878 aaPredicted RBP19.79■□□□□ 0.76
VRK3-213ENST00000597215 CRYBG1Q9Y4K1 1723 aa19.79■□□□□ 0.76
VRK3-213ENST00000597215 HAP1P54257 671 aaPredicted RBP19.78■□□□□ 0.76
VRK3-213ENST00000597215 NLRP6P59044 892 aa19.78■□□□□ 0.76
VRK3-213ENST00000597215 CARD14Q9BXL6 1004 aa19.78■□□□□ 0.76
VRK3-213ENST00000597215 USP54Q70EL1 1684 aa19.78■□□□□ 0.76
VRK3-213ENST00000597215 LRP6O75581 1613 aa19.77■□□□□ 0.76
VRK3-213ENST00000597215 PHRF1Q9P1Y6 1649 aaKnown RBP19.77■□□□□ 0.76
VRK3-213ENST00000597215 KIF20BQ96Q89 1820 aa19.77■□□□□ 0.76
VRK3-213ENST00000597215 PLEKHG5O94827 1062 aa19.77■□□□□ 0.76
VRK3-213ENST00000597215 USP19O94966 1318 aa19.76■□□□□ 0.75
VRK3-213ENST00000597215 USP31Q70CQ4 1352 aa19.76■□□□□ 0.75
VRK3-213ENST00000597215 NME9Q86XW9 330 aa19.76■□□□□ 0.75
VRK3-213ENST00000597215 CABLES1Q8TDN4 633 aa19.76■□□□□ 0.75
VRK3-213ENST00000597215 MARF1Q9Y4F3 1742 aaKnown RBP19.76■□□□□ 0.75
VRK3-213ENST00000597215 SLIT3O75094 1523 aa19.74■□□□□ 0.75
VRK3-213ENST00000597215 CGNL1Q0VF96 1302 aa19.74■□□□□ 0.75
VRK3-213ENST00000597215 MEX3CQ5U5Q3 659 aaKnown RBP19.73■□□□□ 0.75
VRK3-213ENST00000597215 OVOS2A0A0J9YW53 1432 aa19.73■□□□□ 0.75
VRK3-213ENST00000597215 OVOS2Q6IE36 1432 aa19.73■□□□□ 0.75
VRK3-213ENST00000597215 ADAMTS2O95450 1211 aa19.72■□□□□ 0.75
VRK3-213ENST00000597215 ZRANB1Q9UGI0 708 aa19.72■□□□□ 0.75
VRK3-213ENST00000597215 FYB1O15117 783 aa19.71■□□□□ 0.75
VRK3-213ENST00000597215 COG3Q96JB2 828 aa19.71■□□□□ 0.75
VRK3-213ENST00000597215 KNSTRNQ9Y448 316 aa19.71■□□□□ 0.75
VRK3-213ENST00000597215 ZNF316A6NFI3 1004 aaPredicted RBP19.7■□□□□ 0.74
VRK3-213ENST00000597215 GCP02774 474 aa19.7■□□□□ 0.74
VRK3-213ENST00000597215 KCNH5Q8NCM2 988 aa19.7■□□□□ 0.74
VRK3-213ENST00000597215 ANKRD26Q9UPS8 1709 aa19.69■□□□□ 0.74
VRK3-213ENST00000597215 GGNBP2Q9H3C7 697 aa19.69■□□□□ 0.74
VRK3-213ENST00000597215 NSD2O96028 1365 aa19.69■□□□□ 0.74
VRK3-213ENST00000597215 NFAT5O94916 1531 aa19.67■□□□□ 0.74
VRK3-213ENST00000597215 PER1O15534 1290 aaPredicted RBP19.66■□□□□ 0.74
VRK3-213ENST00000597215 ZC3H6P61129 1189 aaKnown RBP19.66■□□□□ 0.74
VRK3-213ENST00000597215 C8orf37Q96NL8 207 aa19.66■□□□□ 0.74
VRK3-213ENST00000597215 CPDO75976 1380 aa19.66■□□□□ 0.74
VRK3-213ENST00000597215 KIAA0232Q92628 1395 aa19.66■□□□□ 0.74
VRK3-213ENST00000597215 COL14A1Q05707 1796 aaKnown RBP19.65■□□□□ 0.74
VRK3-213ENST00000597215 SOX12O15370 315 aa19.65■□□□□ 0.74
VRK3-213ENST00000597215 AMER1Q5JTC6 1135 aaPredicted RBP19.64■□□□□ 0.73
VRK3-213ENST00000597215 NGLY1Q96IV0 654 aa19.64■□□□□ 0.73
VRK3-213ENST00000597215 PRDM11Q9NQV5 511 aa19.64■□□□□ 0.73
VRK3-213ENST00000597215 PLCH1Q4KWH8 1693 aa19.63■□□□□ 0.73
VRK3-213ENST00000597215 DDX10Q13206 875 aaKnown RBP19.63■□□□□ 0.73
VRK3-213ENST00000597215 PHF23Q9BUL5 403 aaPredicted RBP19.63■□□□□ 0.73
VRK3-213ENST00000597215 NPC1L1Q9UHC9 1359 aa19.62■□□□□ 0.73
VRK3-213ENST00000597215 NWD2Q9ULI1 1742 aa19.62■□□□□ 0.73
VRK3-213ENST00000597215 AFF2P51816 1311 aa19.61■□□□□ 0.73
VRK3-213ENST00000597215 FAM83GA6ND36 823 aa19.61■□□□□ 0.73
VRK3-213ENST00000597215 ARHGEF25Q86VW2 580 aa19.61■□□□□ 0.73
VRK3-213ENST00000597215 LTN1O94822 1766 aa19.61■□□□□ 0.73
VRK3-213ENST00000597215 SLIT2O94813 1529 aa19.61■□□□□ 0.73
VRK3-213ENST00000597215 ZBTB7CA1YPR0 619 aa19.6■□□□□ 0.73
VRK3-213ENST00000597215 CHRNA2Q15822 529 aa19.6■□□□□ 0.73
VRK3-213ENST00000597215 FNBP4Q8N3X1 1017 aaPredicted RBP19.6■□□□□ 0.73
VRK3-213ENST00000597215 ABCC6O95255 1503 aa19.6■□□□□ 0.73
VRK3-213ENST00000597215 MORC1Q86VD1 984 aa19.59■□□□□ 0.73
VRK3-213ENST00000597215 LMO7Q8WWI1 1683 aa19.59■□□□□ 0.73
VRK3-213ENST00000597215 AATKQ6ZMQ8 1374 aa19.58■□□□□ 0.73
VRK3-213ENST00000597215 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.58■□□□□ 0.72
VRK3-213ENST00000597215 COL18A1P39060 1754 aa19.57■□□□□ 0.72
VRK3-213ENST00000597215 CC2D1BQ5T0F9 858 aaKnown RBP19.57■□□□□ 0.72
VRK3-213ENST00000597215 ZNF772Q68DY9 489 aaPredicted RBP19.57■□□□□ 0.72
VRK3-213ENST00000597215 USP21Q9UK80 565 aa19.57■□□□□ 0.72
VRK3-213ENST00000597215 NRAPQ86VF7 1730 aa19.56■□□□□ 0.72
VRK3-213ENST00000597215 BTG4Q9NY30 223 aa19.56■□□□□ 0.72
VRK3-213ENST00000597215 MAP3K19Q56UN5 1328 aa19.55■□□□□ 0.72
VRK3-213ENST00000597215 BCL9LQ86UU0 1499 aa19.55■□□□□ 0.72
VRK3-213ENST00000597215 UNC5CLQ8IV45 518 aa19.55■□□□□ 0.72
VRK3-213ENST00000597215 MAP2P11137 1827 aaKnown RBP19.55■□□□□ 0.72
VRK3-213ENST00000597215 CAMTA1Q9Y6Y1 1673 aa19.55■□□□□ 0.72
VRK3-213ENST00000597215 FBLN1P23142 703 aa19.54■□□□□ 0.72
VRK3-213ENST00000597215 TNNT2P45379 298 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms