RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 MEX3CQ5U5Q3 659 aaKnown RBP25.4■■□□□ 1.66
IRF3-216ENST00000597180 SSH2Q76I76 1423 aa25.39■■□□□ 1.66
IRF3-216ENST00000597180 LMOD2Q6P5Q4 547 aa25.39■■□□□ 1.66
IRF3-216ENST00000597180 CD163L1Q9NR16 1453 aa25.39■■□□□ 1.65
IRF3-216ENST00000597180 PAK3O75914 559 aaPredicted RBP25.38■■□□□ 1.65
IRF3-216ENST00000597180 NINLQ9Y2I6 1382 aa25.38■■□□□ 1.65
IRF3-216ENST00000597180 ZNF692Q9BU19 519 aaPredicted RBP25.37■■□□□ 1.65
IRF3-216ENST00000597180 RGS17Q9UGC6 210 aaPredicted RBP25.37■■□□□ 1.65
IRF3-216ENST00000597180 HSPA5P11021 654 aaKnown RBP25.36■■□□□ 1.65
IRF3-216ENST00000597180 PHRF1Q9P1Y6 1649 aaKnown RBP25.36■■□□□ 1.65
IRF3-216ENST00000597180 ADAMTS2O95450 1211 aa25.35■■□□□ 1.65
IRF3-216ENST00000597180 PIK3C2AO00443 1686 aa25.35■■□□□ 1.65
IRF3-216ENST00000597180 MYOM1P52179 1685 aa25.34■■□□□ 1.65
IRF3-216ENST00000597180 CDCA8Q53HL2 280 aa25.34■■□□□ 1.65
IRF3-216ENST00000597180 TMC1Q8TDI8 760 aa25.33■■□□□ 1.65
IRF3-216ENST00000597180 CABLES1Q8TDN4 633 aa25.33■■□□□ 1.65
IRF3-216ENST00000597180 SLC12A5Q9H2X9 1139 aa25.33■■□□□ 1.65
IRF3-216ENST00000597180 KTN1Q86UP2 1357 aaKnown RBP25.32■■□□□ 1.64
IRF3-216ENST00000597180 C8orf37Q96NL8 207 aa25.32■■□□□ 1.64
IRF3-216ENST00000597180 ABTB2Q8N961 1025 aa25.3■■□□□ 1.64
IRF3-216ENST00000597180 A0A1W2PP64 1363 aa25.3■■□□□ 1.64
IRF3-216ENST00000597180 TERF2IPQ9NYB0 399 aa25.29■■□□□ 1.64
IRF3-216ENST00000597180 AFF2P51816 1311 aa25.29■■□□□ 1.64
IRF3-216ENST00000597180 TTC21BQ7Z4L5 1316 aa25.29■■□□□ 1.64
IRF3-216ENST00000597180 USP54Q70EL1 1684 aa25.29■■□□□ 1.64
IRF3-216ENST00000597180 HAP1P54257 671 aaPredicted RBP25.28■■□□□ 1.64
IRF3-216ENST00000597180 HDGFL2Q7Z4V5 671 aaPredicted RBP25.28■■□□□ 1.64
IRF3-216ENST00000597180 PLCH1Q4KWH8 1693 aa25.28■■□□□ 1.64
IRF3-216ENST00000597180 TTC21AQ8NDW8 1320 aa25.28■■□□□ 1.64
IRF3-216ENST00000597180 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.28■■□□□ 1.64
IRF3-216ENST00000597180 NWD2Q9ULI1 1742 aa25.27■■□□□ 1.64
IRF3-216ENST00000597180 ZNF772Q68DY9 489 aaPredicted RBP25.27■■□□□ 1.64
IRF3-216ENST00000597180 NGLY1Q96IV0 654 aa25.27■■□□□ 1.64
IRF3-216ENST00000597180 USP19O94966 1318 aa25.27■■□□□ 1.64
IRF3-216ENST00000597180 PLEKHG5O94827 1062 aa25.26■■□□□ 1.63
IRF3-216ENST00000597180 NUTM2GQ5VZR2 741 aa25.26■■□□□ 1.63
IRF3-216ENST00000597180 FNBP4Q8N3X1 1017 aaPredicted RBP25.26■■□□□ 1.63
IRF3-216ENST00000597180 EDC4Q6P2E9 1401 aaKnown RBP25.26■■□□□ 1.63
IRF3-216ENST00000597180 NLRP13Q86W25 1043 aa25.25■■□□□ 1.63
IRF3-216ENST00000597180 ANKRD36BQ8N2N9 1353 aa25.25■■□□□ 1.63
IRF3-216ENST00000597180 SLIT3O75094 1523 aa25.25■■□□□ 1.63
IRF3-216ENST00000597180 COL14A1Q05707 1796 aaKnown RBP25.25■■□□□ 1.63
IRF3-216ENST00000597180 SLIT2O94813 1529 aa25.24■■□□□ 1.63
IRF3-216ENST00000597180 POTEAQ6S8J7 498 aa25.24■■□□□ 1.63
IRF3-216ENST00000597180 ILDR2Q71H61 639 aa25.21■■□□□ 1.63
IRF3-216ENST00000597180 BCL9LQ86UU0 1499 aa25.21■■□□□ 1.63
IRF3-216ENST00000597180 NRAPQ86VF7 1730 aa25.2■■□□□ 1.63
IRF3-216ENST00000597180 NLRP6P59044 892 aa25.2■■□□□ 1.62
IRF3-216ENST00000597180 USP21Q9UK80 565 aa25.19■■□□□ 1.62
IRF3-216ENST00000597180 USP31Q70CQ4 1352 aa25.18■■□□□ 1.62
IRF3-216ENST00000597180 FAM83GA6ND36 823 aa25.17■■□□□ 1.62
IRF3-216ENST00000597180 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.17■■□□□ 1.62
IRF3-216ENST00000597180 CPDO75976 1380 aa25.17■■□□□ 1.62
IRF3-216ENST00000597180 KIAA0232Q92628 1395 aa25.17■■□□□ 1.62
IRF3-216ENST00000597180 KIF20BQ96Q89 1820 aa25.16■■□□□ 1.62
IRF3-216ENST00000597180 C11orf95C9JLR9 678 aaPredicted RBP25.16■■□□□ 1.62
IRF3-216ENST00000597180 ATRNO75882 1429 aa25.16■■□□□ 1.62
IRF3-216ENST00000597180 GCP02774 474 aa25.16■■□□□ 1.62
IRF3-216ENST00000597180 NME9Q86XW9 330 aa25.15■■□□□ 1.62
IRF3-216ENST00000597180 LMO7Q8WWI1 1683 aa25.14■■□□□ 1.62
IRF3-216ENST00000597180 QTRT2Q9H974 415 aaKnown RBP25.14■■□□□ 1.62
IRF3-216ENST00000597180 PRDM11Q9NQV5 511 aa25.14■■□□□ 1.62
IRF3-216ENST00000597180 NFAT5O94916 1531 aa25.13■■□□□ 1.61
IRF3-216ENST00000597180 UNC5CLQ8IV45 518 aa25.13■■□□□ 1.61
IRF3-216ENST00000597180 TRPC5Q9UL62 973 aaPredicted RBP25.13■■□□□ 1.61
IRF3-216ENST00000597180 OVOS2A0A0J9YW53 1432 aa25.12■■□□□ 1.61
IRF3-216ENST00000597180 OVOS2Q6IE36 1432 aa25.12■■□□□ 1.61
IRF3-216ENST00000597180 ZC3H6P61129 1189 aaKnown RBP25.12■■□□□ 1.61
IRF3-216ENST00000597180 COL18A1P39060 1754 aa25.11■■□□□ 1.61
IRF3-216ENST00000597180 POLR3GLQ9BT43 218 aa25.11■■□□□ 1.61
IRF3-216ENST00000597180 ZRANB1Q9UGI0 708 aa25.11■■□□□ 1.61
IRF3-216ENST00000597180 KCNH5Q8NCM2 988 aa25.1■■□□□ 1.61
IRF3-216ENST00000597180 CDK12Q9NYV4 1490 aaPredicted RBP25.09■■□□□ 1.61
IRF3-216ENST00000597180 LTN1O94822 1766 aa25.09■■□□□ 1.61
IRF3-216ENST00000597180 RXRBP28702 533 aa25.09■■□□□ 1.61
IRF3-216ENST00000597180 BTG4Q9NY30 223 aa25.09■■□□□ 1.61
IRF3-216ENST00000597180 KIF7Q2M1P5 1343 aa25.09■■□□□ 1.61
IRF3-216ENST00000597180 RBM6P78332 1123 aaKnown RBP25.08■■□□□ 1.61
IRF3-216ENST00000597180 CARD14Q9BXL6 1004 aa25.08■■□□□ 1.61
IRF3-216ENST00000597180 GLI3P10071 1580 aa25.07■■□□□ 1.6
IRF3-216ENST00000597180 NSD3Q9BZ95 1437 aa25.07■■□□□ 1.6
IRF3-216ENST00000597180 CHRNA2Q15822 529 aa25.07■■□□□ 1.6
IRF3-216ENST00000597180 CAMTA1Q9Y6Y1 1673 aa25.07■■□□□ 1.6
IRF3-216ENST00000597180 RGPD5Q99666 1765 aa25.05■■□□□ 1.6
IRF3-216ENST00000597180 VPS72Q15906 364 aa25.05■■□□□ 1.6
IRF3-216ENST00000597180 ABCC6O95255 1503 aa25.05■■□□□ 1.6
IRF3-216ENST00000597180 AATKQ6ZMQ8 1374 aa25.05■■□□□ 1.6
IRF3-216ENST00000597180 FYB1O15117 783 aa25.04■■□□□ 1.6
IRF3-216ENST00000597180 ARHGEF25Q86VW2 580 aa25.04■■□□□ 1.6
IRF3-216ENST00000597180 ANKRD26Q9UPS8 1709 aa25.03■■□□□ 1.6
IRF3-216ENST00000597180 GJD4Q96KN9 370 aaPredicted RBP25.03■■□□□ 1.6
IRF3-216ENST00000597180 COG3Q96JB2 828 aa25.02■■□□□ 1.6
IRF3-216ENST00000597180 CCDC7Q96M83 1385 aa25.02■■□□□ 1.6
IRF3-216ENST00000597180 SOX12O15370 315 aa25.01■■□□□ 1.59
IRF3-216ENST00000597180 PANK3Q9H999 370 aa25.01■■□□□ 1.59
IRF3-216ENST00000597180 RGS12O14924 1447 aa25■■□□□ 1.59
IRF3-216ENST00000597180 COL5A2P05997 1499 aaPredicted RBP25■■□□□ 1.59
IRF3-216ENST00000597180 ZEB1P37275 1124 aaPredicted RBP24.99■■□□□ 1.59
IRF3-216ENST00000597180 WASHC2AQ641Q2 1341 aa24.99■■□□□ 1.59
IRF3-216ENST00000597180 GGNBP2Q9H3C7 697 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms