RNA–Protein interactions for RNA: ENST00000595358.5

CCDC61-204, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC61, Length 1,817 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-204ENST00000595358 SSH2Q76I76 1423 aa33.66■■■□□ 2.98
CCDC61-204ENST00000595358 PMFBP1Q8TBY8 1022 aa33.65■■■□□ 2.98
CCDC61-204ENST00000595358 MAP2P11137 1827 aaKnown RBP33.63■■■□□ 2.97
CCDC61-204ENST00000595358 NGDNQ8NEJ9 315 aaKnown RBP33.62■■■□□ 2.97
CCDC61-204ENST00000595358 COG3Q96JB2 828 aa33.62■■■□□ 2.97
CCDC61-204ENST00000595358 SMG6Q86US8 1419 aaKnown RBP33.62■■■□□ 2.97
CCDC61-204ENST00000595358 ZRANB1Q9UGI0 708 aa33.61■■■□□ 2.97
CCDC61-204ENST00000595358 COL3A1P02461 1466 aaPredicted RBP33.61■■■□□ 2.97
CCDC61-204ENST00000595358 STRCQ7RTU9 1775 aa33.6■■■□□ 2.97
CCDC61-204ENST00000595358 PROSER2Q86WR7 435 aaPredicted RBP33.6■■■□□ 2.97
CCDC61-204ENST00000595358 AATKQ6ZMQ8 1374 aa33.6■■■□□ 2.97
CCDC61-204ENST00000595358 PNPLA6Q8IY17 1366 aa33.6■■■□□ 2.97
CCDC61-204ENST00000595358 STRCP1A6NGW2 1772 aa33.59■■■□□ 2.97
CCDC61-204ENST00000595358 TTC21AQ8NDW8 1320 aa33.58■■■□□ 2.97
CCDC61-204ENST00000595358 SALL2Q9Y467 1007 aaPredicted RBP33.58■■■□□ 2.97
CCDC61-204ENST00000595358 PDE3BQ13370 1112 aa33.57■■■□□ 2.96
CCDC61-204ENST00000595358 POLKQ9UBT6 870 aa33.57■■■□□ 2.96
CCDC61-204ENST00000595358 C14orf37Q86TY3 774 aa33.56■■■□□ 2.96
CCDC61-204ENST00000595358 NUDCQ9Y266 331 aa33.56■■■□□ 2.96
CCDC61-204ENST00000595358 OVOS2A0A0J9YW53 1432 aa33.55■■■□□ 2.96
CCDC61-204ENST00000595358 OVOS2Q6IE36 1432 aa33.55■■■□□ 2.96
CCDC61-204ENST00000595358 CCDC146Q8IYE0 955 aa33.55■■■□□ 2.96
CCDC61-204ENST00000595358 FBLN1P23142 703 aa33.53■■■□□ 2.96
CCDC61-204ENST00000595358 PHF8Q9UPP1 1060 aa33.52■■■□□ 2.96
CCDC61-204ENST00000595358 NCOA3Q9Y6Q9 1424 aa33.5■■■□□ 2.95
CCDC61-204ENST00000595358 C19orf44Q9H6X5 657 aa33.49■■■□□ 2.95
CCDC61-204ENST00000595358 SUPT16HQ9Y5B9 1047 aaKnown RBP33.49■■■□□ 2.95
CCDC61-204ENST00000595358 APAF1O14727 1248 aa33.48■■■□□ 2.95
CCDC61-204ENST00000595358 NGEFQ8N5V2 710 aa33.48■■■□□ 2.95
CCDC61-204ENST00000595358 USP31Q70CQ4 1352 aa33.47■■■□□ 2.95
CCDC61-204ENST00000595358 CDK12Q9NYV4 1490 aaPredicted RBP33.47■■■□□ 2.95
CCDC61-204ENST00000595358 PIK3C2AO00443 1686 aa33.47■■■□□ 2.95
CCDC61-204ENST00000595358 DIAPH1O60610 1272 aaKnown RBP33.46■■■□□ 2.95
CCDC61-204ENST00000595358 RUNDC1Q96C34 613 aa33.46■■■□□ 2.95
CCDC61-204ENST00000595358 ZNF521Q96K83 1311 aa33.46■■■□□ 2.95
CCDC61-204ENST00000595358 U2AF1L5P0DN76 240 aaPredicted RBP33.46■■■□□ 2.95
CCDC61-204ENST00000595358 U2AF1Q01081 240 aaKnown RBP eCLIP33.46■■■□□ 2.95
CCDC61-204ENST00000595358 EMILIN1Q9Y6C2 1016 aa33.46■■■□□ 2.95
CCDC61-204ENST00000595358 TMEM94Q12767 1356 aa33.45■■■□□ 2.94
CCDC61-204ENST00000595358 ESCO1Q5FWF5 840 aa33.44■■■□□ 2.94
CCDC61-204ENST00000595358 PPM1GO15355 546 aaPredicted RBP33.43■■■□□ 2.94
CCDC61-204ENST00000595358 USP54Q70EL1 1684 aa33.42■■■□□ 2.94
CCDC61-204ENST00000595358 RRS1Q15050 365 aaKnown RBP33.41■■■□□ 2.94
CCDC61-204ENST00000595358 IQSEC2Q5JU85 1478 aa33.41■■■□□ 2.94
CCDC61-204ENST00000595358 DCCP43146 1447 aa33.4■■■□□ 2.94
CCDC61-204ENST00000595358 CDCA7LQ96GN5 454 aa33.4■■■□□ 2.94
CCDC61-204ENST00000595358 U2SURPO15042 1029 aaKnown RBP33.39■■■□□ 2.94
CCDC61-204ENST00000595358 NEFLP07196 543 aa33.39■■■□□ 2.94
CCDC61-204ENST00000595358 MARF1Q9Y4F3 1742 aaKnown RBP33.37■■■□□ 2.93
CCDC61-204ENST00000595358 C1orf167Q5SNV9 1468 aa33.37■■■□□ 2.93
CCDC61-204ENST00000595358 ORAI2Q96SN7 254 aa33.36■■■□□ 2.93
CCDC61-204ENST00000595358 LRRC7Q96NW7 1537 aa33.35■■■□□ 2.93
CCDC61-204ENST00000595358 FKBP8Q14318 412 aa33.35■■■□□ 2.93
CCDC61-204ENST00000595358 TCP11L2Q8N4U5 519 aa33.35■■■□□ 2.93
CCDC61-204ENST00000595358 PLEKHF1Q96S99 279 aa33.34■■■□□ 2.93
CCDC61-204ENST00000595358 KIF1AQ12756 1690 aa33.34■■■□□ 2.93
CCDC61-204ENST00000595358 XIRP1Q702N8 1843 aaKnown RBP33.34■■■□□ 2.93
CCDC61-204ENST00000595358 NLRP6P59044 892 aa33.33■■■□□ 2.93
CCDC61-204ENST00000595358 PSME1Q06323 249 aa33.33■■■□□ 2.93
CCDC61-204ENST00000595358 GOLGA2Q08379 1002 aa33.33■■■□□ 2.93
CCDC61-204ENST00000595358 NCBP3Q53F19 620 aaKnown RBP33.33■■■□□ 2.93
CCDC61-204ENST00000595358 ATF3P18847 181 aa33.32■■■□□ 2.93
CCDC61-204ENST00000595358 IL13P35225 146 aa33.32■■■□□ 2.93
CCDC61-204ENST00000595358 ABTB2Q8N961 1025 aa33.32■■■□□ 2.92
CCDC61-204ENST00000595358 MST1RQ04912 1400 aa33.31■■■□□ 2.92
CCDC61-204ENST00000595358 PAK3O75914 559 aaPredicted RBP33.31■■■□□ 2.92
CCDC61-204ENST00000595358 PNNQ9H307 717 aaKnown RBP33.3■■■□□ 2.92
CCDC61-204ENST00000595358 PEAK1Q9H792 1746 aa33.3■■■□□ 2.92
CCDC61-204ENST00000595358 FCHSD2O94868 740 aa33.29■■■□□ 2.92
CCDC61-204ENST00000595358 WWC1Q8IX03 1113 aa33.28■■■□□ 2.92
CCDC61-204ENST00000595358 PHF23Q9BUL5 403 aaPredicted RBP33.28■■■□□ 2.92
CCDC61-204ENST00000595358 CADPS2Q86UW7 1296 aa33.27■■■□□ 2.92
CCDC61-204ENST00000595358 MSH6P52701 1360 aa33.27■■■□□ 2.92
CCDC61-204ENST00000595358 FOXO3O43524 673 aa33.26■■■□□ 2.92
CCDC61-204ENST00000595358 CCDC27Q2M243 656 aa33.26■■■□□ 2.92
CCDC61-204ENST00000595358 RNF123Q5XPI4 1314 aa33.26■■■□□ 2.91
CCDC61-204ENST00000595358 SLFN5Q08AF3 891 aa33.25■■■□□ 2.91
CCDC61-204ENST00000595358 MAP3K19Q56UN5 1328 aa33.25■■■□□ 2.91
CCDC61-204ENST00000595358 ZNF335Q9H4Z2 1342 aaPredicted RBP33.24■■■□□ 2.91
CCDC61-204ENST00000595358 DUSP27Q5VZP5 1158 aa33.24■■■□□ 2.91
CCDC61-204ENST00000595358 TRMT2AQ8IZ69 625 aaKnown RBP33.24■■■□□ 2.91
CCDC61-204ENST00000595358 RRP7AQ9Y3A4 280 aaKnown RBP33.24■■■□□ 2.91
CCDC61-204ENST00000595358 SOX12O15370 315 aa33.23■■■□□ 2.91
CCDC61-204ENST00000595358 NUTM2GQ5VZR2 741 aa33.23■■■□□ 2.91
CCDC61-204ENST00000595358 RSPH6AQ9H0K4 717 aa33.23■■■□□ 2.91
CCDC61-204ENST00000595358 TRPM3Q9HCF6 1732 aaPredicted RBP33.22■■■□□ 2.91
CCDC61-204ENST00000595358 SBNO1A3KN83 1393 aa33.22■■■□□ 2.91
CCDC61-204ENST00000595358 NEUROD2Q15784 382 aa33.22■■■□□ 2.91
CCDC61-204ENST00000595358 MAPK8IP3Q9UPT6 1336 aa33.22■■■□□ 2.91
CCDC61-204ENST00000595358 FLT4P35916 1363 aa33.2■■■□□ 2.91
CCDC61-204ENST00000595358 EIF4A2Q14240 407 aaKnown RBP33.2■■■□□ 2.91
CCDC61-204ENST00000595358 RCAN3Q9UKA8 241 aa33.2■■■□□ 2.91
CCDC61-204ENST00000595358 DMRT2Q9Y5R5 561 aa33.2■■■□□ 2.91
CCDC61-204ENST00000595358 E9PSI1 815 aa33.19■■■□□ 2.9
CCDC61-204ENST00000595358 KIF24Q5T7B8 1368 aa33.19■■■□□ 2.9
CCDC61-204ENST00000595358 TMPOP42166 694 aaKnown RBP33.18■■■□□ 2.9
CCDC61-204ENST00000595358 HSP90AB2PQ58FF8 381 aa33.18■■■□□ 2.9
CCDC61-204ENST00000595358 SPINK5Q9NQ38 1064 aaPredicted RBP33.18■■■□□ 2.9
CCDC61-204ENST00000595358 PRKAR2BP31323 418 aa33.17■■■□□ 2.9
CCDC61-204ENST00000595358 WDR63Q8IWG1 891 aa33.17■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms