RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 TBX22Q9Y458 520 aa20.04■□□□□ 0.8
PNKP-204ENST00000594661 LAS1LQ9Y4W2 734 aaKnown RBP20.04■□□□□ 0.8
PNKP-204ENST00000594661 ADGRB2O60241 1585 aa20.04■□□□□ 0.8
PNKP-204ENST00000594661 DIP2AQ14689 1571 aa20.04■□□□□ 0.8
PNKP-204ENST00000594661 CCDC146Q8IYE0 955 aa20.03■□□□□ 0.8
PNKP-204ENST00000594661 KIF20BQ96Q89 1820 aa20.03■□□□□ 0.8
PNKP-204ENST00000594661 NUDT16Q96DE0 195 aaKnown RBP20.03■□□□□ 0.8
PNKP-204ENST00000594661 CDCA7LQ96GN5 454 aa20.03■□□□□ 0.8
PNKP-204ENST00000594661 NCKAP5LQ9HCH0 1330 aa20.02■□□□□ 0.8
PNKP-204ENST00000594661 ZNF142P52746 1687 aaPredicted RBP20.02■□□□□ 0.8
PNKP-204ENST00000594661 AMOTL2Q9Y2J4 779 aa20.02■□□□□ 0.79
PNKP-204ENST00000594661 CPSF1Q10570 1443 aaKnown RBP20.01■□□□□ 0.79
PNKP-204ENST00000594661 PRR36Q9H6K5 1346 aa20.01■□□□□ 0.79
PNKP-204ENST00000594661 ZMYND15Q9H091 742 aa20■□□□□ 0.79
PNKP-204ENST00000594661 CDC42BPGQ6DT37 1551 aa20■□□□□ 0.79
PNKP-204ENST00000594661 RCAN3Q9UKA8 241 aa19.99■□□□□ 0.79
PNKP-204ENST00000594661 PTCH1Q13635 1447 aa19.99■□□□□ 0.79
PNKP-204ENST00000594661 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.98■□□□□ 0.79
PNKP-204ENST00000594661 CCDC61Q9Y6R9 512 aa19.98■□□□□ 0.79
PNKP-204ENST00000594661 XRN1Q8IZH2 1706 aaKnown RBP19.98■□□□□ 0.79
PNKP-204ENST00000594661 CFAP53Q96M91 514 aa19.97■□□□□ 0.79
PNKP-204ENST00000594661 ZNF521Q96K83 1311 aa19.97■□□□□ 0.79
PNKP-204ENST00000594661 APAF1O14727 1248 aa19.96■□□□□ 0.79
PNKP-204ENST00000594661 PODXL2Q9NZ53 605 aa19.96■□□□□ 0.79
PNKP-204ENST00000594661 MON2Q7Z3U7 1717 aa19.96■□□□□ 0.79
PNKP-204ENST00000594661 EDC4Q6P2E9 1401 aaKnown RBP19.96■□□□□ 0.79
PNKP-204ENST00000594661 RRP1P56182 461 aaKnown RBP19.96■□□□□ 0.79
PNKP-204ENST00000594661 AKAP12Q02952 1782 aa19.95■□□□□ 0.78
PNKP-204ENST00000594661 TOPAZ1Q8N9V7 1692 aa19.95■□□□□ 0.78
PNKP-204ENST00000594661 ITSN1Q15811 1721 aa19.95■□□□□ 0.78
PNKP-204ENST00000594661 SETD1BQ9UPS6 1966 aaKnown RBP19.93■□□□□ 0.78
PNKP-204ENST00000594661 COL3A1P02461 1466 aaPredicted RBP19.93■□□□□ 0.78
PNKP-204ENST00000594661 NUTM2FA1L443 756 aa19.93■□□□□ 0.78
PNKP-204ENST00000594661 DAXXQ9UER7 740 aaPredicted RBP19.93■□□□□ 0.78
PNKP-204ENST00000594661 ANKLE2Q86XL3 938 aa19.92■□□□□ 0.78
PNKP-204ENST00000594661 FRAT1Q92837 279 aaPredicted RBP19.92■□□□□ 0.78
PNKP-204ENST00000594661 NKTRP30414 1462 aaKnown RBP19.91■□□□□ 0.78
PNKP-204ENST00000594661 KCNA6P17658 529 aa19.91■□□□□ 0.78
PNKP-204ENST00000594661 NME9Q86XW9 330 aa19.91■□□□□ 0.78
PNKP-204ENST00000594661 VSIG10Q8N0Z9 540 aa19.91■□□□□ 0.78
PNKP-204ENST00000594661 PIK3R4Q99570 1358 aa19.9■□□□□ 0.78
PNKP-204ENST00000594661 TCERG1O14776 1098 aaKnown RBP19.9■□□□□ 0.78
PNKP-204ENST00000594661 PLEKHG5O94827 1062 aa19.89■□□□□ 0.77
PNKP-204ENST00000594661 IQSEC2Q5JU85 1478 aa19.89■□□□□ 0.77
PNKP-204ENST00000594661 ZRANB1Q9UGI0 708 aa19.89■□□□□ 0.77
PNKP-204ENST00000594661 FBLN1P23142 703 aa19.88■□□□□ 0.77
PNKP-204ENST00000594661 GOLGA2Q08379 1002 aa19.88■□□□□ 0.77
PNKP-204ENST00000594661 NRKQ7Z2Y5 1582 aa19.88■□□□□ 0.77
PNKP-204ENST00000594661 NPM2Q86SE8 214 aaKnown RBP19.88■□□□□ 0.77
PNKP-204ENST00000594661 RUNDC1Q96C34 613 aa19.88■□□□□ 0.77
PNKP-204ENST00000594661 DUSP27Q5VZP5 1158 aa19.87■□□□□ 0.77
PNKP-204ENST00000594661 ACEP12821 1306 aa19.87■□□□□ 0.77
PNKP-204ENST00000594661 PLEKHG3A1L390 1219 aa19.87■□□□□ 0.77
PNKP-204ENST00000594661 U2AF1L5P0DN76 240 aaPredicted RBP19.87■□□□□ 0.77
PNKP-204ENST00000594661 U2AF1Q01081 240 aaKnown RBP eCLIP19.87■□□□□ 0.779e-9■■■■■ 30
PNKP-204ENST00000594661 NFKBIBQ15653 356 aa19.87■□□□□ 0.77
PNKP-204ENST00000594661 ZNF692Q9BU19 519 aaPredicted RBP19.87■□□□□ 0.77
PNKP-204ENST00000594661 PNPLA6Q8IY17 1366 aa19.86■□□□□ 0.77
PNKP-204ENST00000594661 CHD2O14647 1828 aaKnown RBP19.86■□□□□ 0.77
PNKP-204ENST00000594661 PDE4AP27815 886 aa19.85■□□□□ 0.77
PNKP-204ENST00000594661 SLFN5Q08AF3 891 aa19.85■□□□□ 0.77
PNKP-204ENST00000594661 BACH2Q9BYV9 841 aa19.85■□□□□ 0.77
PNKP-204ENST00000594661 SPINK5Q9NQ38 1064 aaPredicted RBP19.85■□□□□ 0.77
PNKP-204ENST00000594661 POLKQ9UBT6 870 aa19.85■□□□□ 0.77
PNKP-204ENST00000594661 MS4A1P11836 297 aa19.84■□□□□ 0.77
PNKP-204ENST00000594661 NGEFQ8N5V2 710 aa19.84■□□□□ 0.77
PNKP-204ENST00000594661 DDRGK1Q96HY6 314 aa19.84■□□□□ 0.77
PNKP-204ENST00000594661 DMRT2Q9Y5R5 561 aa19.84■□□□□ 0.77
PNKP-204ENST00000594661 RGPD8O14715 1765 aaPredicted RBP19.84■□□□□ 0.77
PNKP-204ENST00000594661 TCP11L2Q8N4U5 519 aa19.84■□□□□ 0.77
PNKP-204ENST00000594661 EXOC6Q8TAG9 804 aa19.84■□□□□ 0.77
PNKP-204ENST00000594661 RRP7AQ9Y3A4 280 aaKnown RBP19.84■□□□□ 0.77
PNKP-204ENST00000594661 MAP2P11137 1827 aaKnown RBP19.84■□□□□ 0.77
PNKP-204ENST00000594661 U2SURPO15042 1029 aaKnown RBP19.83■□□□□ 0.77
PNKP-204ENST00000594661 USP6P35125 1406 aa19.83■□□□□ 0.76
PNKP-204ENST00000594661 TTC21BQ7Z4L5 1316 aa19.82■□□□□ 0.76
PNKP-204ENST00000594661 WWC1Q8IX03 1113 aa19.82■□□□□ 0.76
PNKP-204ENST00000594661 TRMT2AQ8IZ69 625 aaKnown RBP19.82■□□□□ 0.76
PNKP-204ENST00000594661 COG3Q96JB2 828 aa19.82■□□□□ 0.76
PNKP-204ENST00000594661 NPHP4O75161 1426 aaPredicted RBP19.81■□□□□ 0.76
PNKP-204ENST00000594661 DIAPH1O60610 1272 aaKnown RBP19.81■□□□□ 0.76
PNKP-204ENST00000594661 NEUROD2Q15784 382 aa19.81■□□□□ 0.76
PNKP-204ENST00000594661 PMFBP1Q8TBY8 1022 aa19.81■□□□□ 0.76
PNKP-204ENST00000594661 EMILIN1Q9Y6C2 1016 aa19.81■□□□□ 0.76
PNKP-204ENST00000594661 AATKQ6ZMQ8 1374 aa19.8■□□□□ 0.76
PNKP-204ENST00000594661 PLIN1O60240 522 aa19.8■□□□□ 0.76
PNKP-204ENST00000594661 NALCNQ8IZF0 1738 aa19.8■□□□□ 0.76
PNKP-204ENST00000594661 FMN2Q9NZ56 1722 aa19.8■□□□□ 0.76
PNKP-204ENST00000594661 SSH2Q76I76 1423 aa19.79■□□□□ 0.76
PNKP-204ENST00000594661 E9PSI1 815 aa19.78■□□□□ 0.76
PNKP-204ENST00000594661 RRP9O43818 475 aaKnown RBP19.78■□□□□ 0.76
PNKP-204ENST00000594661 PLEKHF1Q96S99 279 aa19.78■□□□□ 0.76
PNKP-204ENST00000594661 PHF23Q9BUL5 403 aaPredicted RBP19.78■□□□□ 0.76
PNKP-204ENST00000594661 OVOS2A0A0J9YW53 1432 aa19.77■□□□□ 0.76
PNKP-204ENST00000594661 OVOS2Q6IE36 1432 aa19.77■□□□□ 0.76
PNKP-204ENST00000594661 ANKARQ7Z5J8 1434 aa19.77■□□□□ 0.76
PNKP-204ENST00000594661 CDK12Q9NYV4 1490 aaPredicted RBP19.77■□□□□ 0.76
PNKP-204ENST00000594661 RBM33Q96EV2 1170 aaKnown RBP19.77■□□□□ 0.76
PNKP-204ENST00000594661 RRS1Q15050 365 aaKnown RBP19.76■□□□□ 0.75
PNKP-204ENST00000594661 CCDC27Q2M243 656 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms