RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 KDM2AQ9Y2K7 1162 aa18.17■□□□□ 0.5
SIN3B-204ENST00000594372 PHRF1Q9P1Y6 1649 aaKnown RBP18.16■□□□□ 0.5
SIN3B-204ENST00000594372 THSD7AQ9UPZ6 1657 aa18.16■□□□□ 0.5
SIN3B-204ENST00000594372 ITSN1Q15811 1721 aa18.16■□□□□ 0.5
SIN3B-204ENST00000594372 ONECUT3O60422 494 aaPredicted RBP18.16■□□□□ 0.5
SIN3B-204ENST00000594372 TULP4Q9NRJ4 1543 aa18.15■□□□□ 0.5
SIN3B-204ENST00000594372 EN1Q05925 392 aaPredicted RBP18.15■□□□□ 0.5
SIN3B-204ENST00000594372 PAK3O75914 559 aaPredicted RBP18.14■□□□□ 0.49
SIN3B-204ENST00000594372 ACIN1Q9UKV3 1341 aaKnown RBP18.14■□□□□ 0.49
SIN3B-204ENST00000594372 RAB3GAP2Q9H2M9 1393 aa18.13■□□□□ 0.49
SIN3B-204ENST00000594372 BAG6P46379 1132 aa18.12■□□□□ 0.49
SIN3B-204ENST00000594372 CHRNA2Q15822 529 aa18.12■□□□□ 0.49
SIN3B-204ENST00000594372 NUTM2GQ5VZR2 741 aa18.12■□□□□ 0.49
SIN3B-204ENST00000594372 GPRASP1Q5JY77 1395 aa18.12■□□□□ 0.49
SIN3B-204ENST00000594372 HRCP23327 699 aa18.11■□□□□ 0.49
SIN3B-204ENST00000594372 SPATA31A5Q5VU36 1347 aa18.1■□□□□ 0.49
SIN3B-204ENST00000594372 SPATA31A7Q8IWB4 1347 aa18.1■□□□□ 0.49
SIN3B-204ENST00000594372 R3HDM1Q15032 1099 aaKnown RBP18.1■□□□□ 0.49
SIN3B-204ENST00000594372 NGDNQ8NEJ9 315 aaKnown RBP18.1■□□□□ 0.49
SIN3B-204ENST00000594372 WASLO00401 505 aaPredicted RBP18.09■□□□□ 0.49
SIN3B-204ENST00000594372 DCAF11Q8TEB1 546 aa18.09■□□□□ 0.49
SIN3B-204ENST00000594372 TOPAZ1Q8N9V7 1692 aa18.09■□□□□ 0.49
SIN3B-204ENST00000594372 ATP7BP35670 1465 aa18.08■□□□□ 0.49
SIN3B-204ENST00000594372 KIAA0232Q92628 1395 aa18.08■□□□□ 0.49
SIN3B-204ENST00000594372 PRDM11Q9NQV5 511 aa18.08■□□□□ 0.48
SIN3B-204ENST00000594372 STRN4Q9NRL3 753 aa18.08■□□□□ 0.48
SIN3B-204ENST00000594372 EZH2Q15910 746 aaKnown RBP18.07■□□□□ 0.48
SIN3B-204ENST00000594372 ZC3H6P61129 1189 aaKnown RBP18.06■□□□□ 0.48
SIN3B-204ENST00000594372 USP35Q9P2H5 1018 aa18.06■□□□□ 0.48
SIN3B-204ENST00000594372 NUP188Q5SRE5 1749 aa18.06■□□□□ 0.48
SIN3B-204ENST00000594372 NRKQ7Z2Y5 1582 aa18.04■□□□□ 0.48
SIN3B-204ENST00000594372 RREB1Q92766 1687 aa18.04■□□□□ 0.48
SIN3B-204ENST00000594372 TRIM37O94972 964 aa18.04■□□□□ 0.48
SIN3B-204ENST00000594372 NUDT16Q96DE0 195 aaKnown RBP18.03■□□□□ 0.48
SIN3B-204ENST00000594372 EIF3AQ14152 1382 aaKnown RBP18.03■□□□□ 0.48
SIN3B-204ENST00000594372 SPATA31A1Q5TZJ5 1347 aa18.02■□□□□ 0.48
SIN3B-204ENST00000594372 CAMTA1Q9Y6Y1 1673 aa18■□□□□ 0.47
SIN3B-204ENST00000594372 LMO7Q8WWI1 1683 aa17.99■□□□□ 0.47
SIN3B-204ENST00000594372 CDK19Q9BWU1 502 aa17.99■□□□□ 0.47
SIN3B-204ENST00000594372 DISP2A7MBM2 1401 aa17.98■□□□□ 0.47
SIN3B-204ENST00000594372 CAMKK2Q96RR4 588 aa17.98■□□□□ 0.47
SIN3B-204ENST00000594372 SBF2Q86WG5 1849 aa17.98■□□□□ 0.47
SIN3B-204ENST00000594372 SSH2Q76I76 1423 aa17.98■□□□□ 0.47
SIN3B-204ENST00000594372 ACEP12821 1306 aa17.98■□□□□ 0.47
SIN3B-204ENST00000594372 APBA3O96018 575 aa17.97■□□□□ 0.47
SIN3B-204ENST00000594372 LARP1Q6PKG0 1096 aaKnown RBP17.97■□□□□ 0.47
SIN3B-204ENST00000594372 RGPD5Q99666 1765 aa17.96■□□□□ 0.47
SIN3B-204ENST00000594372 ZBTB7CA1YPR0 619 aa17.95■□□□□ 0.46
SIN3B-204ENST00000594372 QRICH2Q9H0J4 1663 aa17.95■□□□□ 0.46
SIN3B-204ENST00000594372 KIAA1210Q9ULL0 1709 aa17.95■□□□□ 0.46
SIN3B-204ENST00000594372 EVA1CP58658 441 aa17.94■□□□□ 0.46
SIN3B-204ENST00000594372 NBPF8Q3BBV2 869 aa17.94■□□□□ 0.46
SIN3B-204ENST00000594372 PARP4Q9UKK3 1724 aaKnown RBP17.94■□□□□ 0.46
SIN3B-204ENST00000594372 WNK3Q9BYP7 1800 aa17.93■□□□□ 0.46
SIN3B-204ENST00000594372 POLR3AO14802 1390 aaPredicted RBP17.93■□□□□ 0.46
SIN3B-204ENST00000594372 FAM196AQ6ZSG2 479 aa17.93■□□□□ 0.46
SIN3B-204ENST00000594372 NBPF1Q3BBV0 1214 aa17.92■□□□□ 0.46
SIN3B-204ENST00000594372 ABTB2Q8N961 1025 aa17.92■□□□□ 0.46
SIN3B-204ENST00000594372 PDE3BQ13370 1112 aa17.91■□□□□ 0.46
SIN3B-204ENST00000594372 PEAK1Q9H792 1746 aa17.91■□□□□ 0.46
SIN3B-204ENST00000594372 LRRC37A3O60309 1634 aa17.9■□□□□ 0.46
SIN3B-204ENST00000594372 PPIP5K1Q6PFW1 1433 aa17.89■□□□□ 0.46
SIN3B-204ENST00000594372 CABP2Q9NPB3 220 aa17.89■□□□□ 0.45
SIN3B-204ENST00000594372 AKAP12Q02952 1782 aa17.89■□□□□ 0.45
SIN3B-204ENST00000594372 COL5A2P05997 1499 aaPredicted RBP17.88■□□□□ 0.45
SIN3B-204ENST00000594372 PIK3C2AO00443 1686 aa17.88■□□□□ 0.45
SIN3B-204ENST00000594372 TCP11L2Q8N4U5 519 aa17.88■□□□□ 0.45
SIN3B-204ENST00000594372 CCDC61Q9Y6R9 512 aa17.88■□□□□ 0.45
SIN3B-204ENST00000594372 USP19O94966 1318 aa17.88■□□□□ 0.45
SIN3B-204ENST00000594372 COL18A1P39060 1754 aa17.88■□□□□ 0.45
SIN3B-204ENST00000594372 BARGINQ6ZT62 677 aa17.87■□□□□ 0.45
SIN3B-204ENST00000594372 PTF1AQ7RTS3 328 aa17.87■□□□□ 0.45
SIN3B-204ENST00000594372 KAT6BQ8WYB5 2073 aa17.86■□□□□ 0.45
SIN3B-204ENST00000594372 PLEKHG3A1L390 1219 aa17.86■□□□□ 0.45
SIN3B-204ENST00000594372 SRPK2P78362 688 aaKnown RBP17.86■□□□□ 0.45
SIN3B-204ENST00000594372 CPDO75976 1380 aa17.85■□□□□ 0.45
SIN3B-204ENST00000594372 GCP02774 474 aa17.85■□□□□ 0.45
SIN3B-204ENST00000594372 PARD3Q8TEW0 1356 aa17.83■□□□□ 0.45
SIN3B-204ENST00000594372 CASZ1Q86V15 1759 aa17.83■□□□□ 0.44
SIN3B-204ENST00000594372 SLIT3O75094 1523 aa17.82■□□□□ 0.44
SIN3B-204ENST00000594372 CRB1P82279 1406 aa17.81■□□□□ 0.44
SIN3B-204ENST00000594372 RGPD3A6NKT7 1758 aaPredicted RBP17.81■□□□□ 0.44
SIN3B-204ENST00000594372 RGPD4Q7Z3J3 1758 aa17.81■□□□□ 0.44
SIN3B-204ENST00000594372 CENPJQ9HC77 1338 aaPredicted RBP17.81■□□□□ 0.44
SIN3B-204ENST00000594372 SOX12O15370 315 aa17.81■□□□□ 0.44
SIN3B-204ENST00000594372 NLRP13Q86W25 1043 aa17.81■□□□□ 0.44
SIN3B-204ENST00000594372 PDGFDQ9GZP0 370 aaPredicted RBP17.81■□□□□ 0.44
SIN3B-204ENST00000594372 ANO8Q9HCE9 1232 aaPredicted RBP17.81■□□□□ 0.44
SIN3B-204ENST00000594372 NBPF14Q5TI25 921 aa17.8■□□□□ 0.44
SIN3B-204ENST00000594372 CABP1Q9NZU7 370 aa17.8■□□□□ 0.44
SIN3B-204ENST00000594372 MYOM1P52179 1685 aa17.8■□□□□ 0.44
SIN3B-204ENST00000594372 USP6P35125 1406 aa17.8■□□□□ 0.44
SIN3B-204ENST00000594372 YY1P25490 414 aa17.79■□□□□ 0.44
SIN3B-204ENST00000594372 NLRP6P59044 892 aa17.79■□□□□ 0.44
SIN3B-204ENST00000594372 STAC3Q96MF2 364 aa17.79■□□□□ 0.44
SIN3B-204ENST00000594372 PPP1R1BQ9UD71 204 aaPredicted RBP17.79■□□□□ 0.44
SIN3B-204ENST00000594372 OVOS2A0A0G2JMS6 1433 aa17.79■□□□□ 0.44
SIN3B-204ENST00000594372 OVOS2A0A0J9YW53 1432 aa17.79■□□□□ 0.44
SIN3B-204ENST00000594372 OVOS2Q6IE36 1432 aa17.79■□□□□ 0.44
SIN3B-204ENST00000594372 AXIN2Q9Y2T1 843 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms