RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 HAP1P54257 671 aaPredicted RBP15.67■□□□□ 0.1
USE1-203ENST00000593597 NRKQ7Z2Y5 1582 aa15.66■□□□□ 0.1
USE1-203ENST00000593597 DEFB132Q7Z7B7 95 aa15.66■□□□□ 0.1
USE1-203ENST00000593597 GPRASP1Q5JY77 1395 aa15.65■□□□□ 0.1
USE1-203ENST00000593597 QRICH2Q9H0J4 1663 aa15.65■□□□□ 0.1
USE1-203ENST00000593597 CCDC125Q86Z20 511 aa15.65■□□□□ 0.1
USE1-203ENST00000593597 RGPD1P0DJD0 1748 aa15.65■□□□□ 0.1
USE1-203ENST00000593597 BTG4Q9NY30 223 aa15.64■□□□□ 0.09
USE1-203ENST00000593597 LMO7Q8WWI1 1683 aa15.63■□□□□ 0.09
USE1-203ENST00000593597 NUDT16Q96DE0 195 aaKnown RBP15.63■□□□□ 0.09
USE1-203ENST00000593597 STAC3Q96MF2 364 aa15.63■□□□□ 0.09
USE1-203ENST00000593597 POLR3AO14802 1390 aaPredicted RBP15.62■□□□□ 0.09
USE1-203ENST00000593597 NBPF1Q3BBV0 1214 aa15.62■□□□□ 0.09
USE1-203ENST00000593597 CCDC9Q9Y3X0 531 aaKnown RBP15.62■□□□□ 0.09
USE1-203ENST00000593597 FAM98CQ17RN3 349 aaKnown RBP15.61■□□□□ 0.09
USE1-203ENST00000593597 KRT27Q7Z3Y8 459 aa15.61■□□□□ 0.09
USE1-203ENST00000593597 ZRANB1Q9UGI0 708 aa15.61■□□□□ 0.09
USE1-203ENST00000593597 KIAA0232Q92628 1395 aa15.61■□□□□ 0.09
USE1-203ENST00000593597 NGDNQ8NEJ9 315 aaKnown RBP15.6■□□□□ 0.09
USE1-203ENST00000593597 CDK19Q9BWU1 502 aa15.6■□□□□ 0.09
USE1-203ENST00000593597 SPATA31A5Q5VU36 1347 aa15.6■□□□□ 0.09
USE1-203ENST00000593597 SPATA31A7Q8IWB4 1347 aa15.6■□□□□ 0.09
USE1-203ENST00000593597 LRP5O75197 1615 aa15.6■□□□□ 0.09
USE1-203ENST00000593597 TRPM1Q7Z4N2 1603 aa15.6■□□□□ 0.09
USE1-203ENST00000593597 PAK3O75914 559 aaPredicted RBP15.59■□□□□ 0.09
USE1-203ENST00000593597 CAMTA1Q9Y6Y1 1673 aa15.58■□□□□ 0.08
USE1-203ENST00000593597 FAM182BQ5T319 152 aa15.58■□□□□ 0.08
USE1-203ENST00000593597 ACEP12821 1306 aa15.58■□□□□ 0.08
USE1-203ENST00000593597 CHRNA2Q15822 529 aa15.57■□□□□ 0.08
USE1-203ENST00000593597 NUTM2GQ5VZR2 741 aa15.57■□□□□ 0.08
USE1-203ENST00000593597 PIK3C2AO00443 1686 aa15.56■□□□□ 0.08
USE1-203ENST00000593597 SPATA31A1Q5TZJ5 1347 aa15.55■□□□□ 0.08
USE1-203ENST00000593597 PLEKHG3A1L390 1219 aa15.55■□□□□ 0.08
USE1-203ENST00000593597 NBPF8Q3BBV2 869 aa15.55■□□□□ 0.08
USE1-203ENST00000593597 PRDM11Q9NQV5 511 aa15.55■□□□□ 0.08
USE1-203ENST00000593597 RREB1Q92766 1687 aa15.54■□□□□ 0.08
USE1-203ENST00000593597 PPIP5K1Q6PFW1 1433 aa15.54■□□□□ 0.08
USE1-203ENST00000593597 USP19O94966 1318 aa15.54■□□□□ 0.08
USE1-203ENST00000593597 WNK3Q9BYP7 1800 aa15.54■□□□□ 0.08
USE1-203ENST00000593597 COL18A1P39060 1754 aa15.54■□□□□ 0.08
USE1-203ENST00000593597 AKAP12Q02952 1782 aa15.54■□□□□ 0.08
USE1-203ENST00000593597 DISP2A7MBM2 1401 aa15.53■□□□□ 0.08
USE1-203ENST00000593597 SSH2Q76I76 1423 aa15.53■□□□□ 0.08
USE1-203ENST00000593597 A0A0G2JS52 829 aa15.53■□□□□ 0.08
USE1-203ENST00000593597 ZC3H6P61129 1189 aaKnown RBP15.53■□□□□ 0.08
USE1-203ENST00000593597 MYT1Q01538 1121 aa15.53■□□□□ 0.08
USE1-203ENST00000593597 CCDC61Q9Y6R9 512 aa15.53■□□□□ 0.08
USE1-203ENST00000593597 PARP4Q9UKK3 1724 aaKnown RBP15.53■□□□□ 0.08
USE1-203ENST00000593597 SLIT3O75094 1523 aa15.52■□□□□ 0.07
USE1-203ENST00000593597 NUP188Q5SRE5 1749 aa15.51■□□□□ 0.07
USE1-203ENST00000593597 CPDO75976 1380 aa15.51■□□□□ 0.07
USE1-203ENST00000593597 CENPJQ9HC77 1338 aaPredicted RBP15.51■□□□□ 0.07
USE1-203ENST00000593597 CABP2Q9NPB3 220 aa15.51■□□□□ 0.07
USE1-203ENST00000593597 RGPD5Q99666 1765 aa15.51■□□□□ 0.07
USE1-203ENST00000593597 PEAK1Q9H792 1746 aa15.51■□□□□ 0.07
USE1-203ENST00000593597 SF3B2Q13435 895 aaKnown RBP15.5■□□□□ 0.07
USE1-203ENST00000593597 STRN4Q9NRL3 753 aa15.5■□□□□ 0.07
USE1-203ENST00000593597 USP6P35125 1406 aa15.5■□□□□ 0.07
USE1-203ENST00000593597 LRRC37A3O60309 1634 aa15.5■□□□□ 0.07
USE1-203ENST00000593597 COL5A2P05997 1499 aaPredicted RBP15.49■□□□□ 0.07
USE1-203ENST00000593597 PSDA5PKW4 1024 aaPredicted RBP15.49■□□□□ 0.07
USE1-203ENST00000593597 EN1Q05925 392 aaPredicted RBP15.49■□□□□ 0.07
USE1-203ENST00000593597 L3MBTL2Q969R5 705 aa15.49■□□□□ 0.07
USE1-203ENST00000593597 SBF2Q86WG5 1849 aa15.49■□□□□ 0.07
USE1-203ENST00000593597 LARP1Q6PKG0 1096 aaKnown RBP15.48■□□□□ 0.07
USE1-203ENST00000593597 BAG6P46379 1132 aa15.47■□□□□ 0.07
USE1-203ENST00000593597 MON2Q7Z3U7 1717 aa15.47■□□□□ 0.07
USE1-203ENST00000593597 SIN3AQ96ST3 1273 aa15.47■□□□□ 0.07
USE1-203ENST00000593597 SRPK2P78362 688 aaKnown RBP15.46■□□□□ 0.07
USE1-203ENST00000593597 ABTB2Q8N961 1025 aa15.46■□□□□ 0.07
USE1-203ENST00000593597 USP35Q9P2H5 1018 aa15.45■□□□□ 0.06
USE1-203ENST00000593597 GCP02774 474 aa15.44■□□□□ 0.06
USE1-203ENST00000593597 EZH2Q15910 746 aaKnown RBP15.44■□□□□ 0.06
USE1-203ENST00000593597 BARGINQ6ZT62 677 aa15.44■□□□□ 0.06
USE1-203ENST00000593597 CABP1Q9NZU7 370 aa15.44■□□□□ 0.06
USE1-203ENST00000593597 USP54Q70EL1 1684 aa15.44■□□□□ 0.06
USE1-203ENST00000593597 TRIM37O94972 964 aa15.43■□□□□ 0.06
USE1-203ENST00000593597 CAMKK2Q96RR4 588 aa15.43■□□□□ 0.06
USE1-203ENST00000593597 BRD4O60885 1362 aaPredicted RBP15.43■□□□□ 0.06
USE1-203ENST00000593597 NFAT5O94916 1531 aa15.43■□□□□ 0.06
USE1-203ENST00000593597 RGPD3A6NKT7 1758 aaPredicted RBP15.41■□□□□ 0.06
USE1-203ENST00000593597 RGPD4Q7Z3J3 1758 aa15.41■□□□□ 0.06
USE1-203ENST00000593597 NLRP13Q86W25 1043 aa15.41■□□□□ 0.06
USE1-203ENST00000593597 CRB1P82279 1406 aa15.41■□□□□ 0.06
USE1-203ENST00000593597 R3HDM1Q15032 1099 aaKnown RBP15.4■□□□□ 0.06
USE1-203ENST00000593597 FAM196AQ6ZSG2 479 aa15.4■□□□□ 0.06
USE1-203ENST00000593597 TCP11L2Q8N4U5 519 aa15.4■□□□□ 0.06
USE1-203ENST00000593597 AATKQ6ZMQ8 1374 aa15.39■□□□□ 0.05
USE1-203ENST00000593597 EVA1CP58658 441 aa15.39■□□□□ 0.05
USE1-203ENST00000593597 CPSF1Q10570 1443 aaKnown RBP15.39■□□□□ 0.05
USE1-203ENST00000593597 CD163L1Q9NR16 1453 aa15.39■□□□□ 0.05
USE1-203ENST00000593597 ROCK2O75116 1388 aaKnown RBP15.38■□□□□ 0.05
USE1-203ENST00000593597 AXIN2Q9Y2T1 843 aa15.38■□□□□ 0.05
USE1-203ENST00000593597 LTN1O94822 1766 aa15.38■□□□□ 0.05
USE1-203ENST00000593597 NLRP6P59044 892 aa15.37■□□□□ 0.05
USE1-203ENST00000593597 EVC2Q86UK5 1308 aa15.37■□□□□ 0.05
USE1-203ENST00000593597 APBA3O96018 575 aa15.36■□□□□ 0.05
USE1-203ENST00000593597 NEUROD1Q13562 356 aa15.36■□□□□ 0.05
USE1-203ENST00000593597 THRAP3Q9Y2W1 955 aaKnown RBP15.36■□□□□ 0.05
USE1-203ENST00000593597 TTC21BQ7Z4L5 1316 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms