RNA–Protein interactions for RNA: ENST00000592923.5

CNN1-210, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-210ENST00000592923 NUDT16Q96DE0 195 aaKnown RBP20.53■□□□□ 0.88
CNN1-210ENST00000592923 NRKQ7Z2Y5 1582 aa20.53■□□□□ 0.88
CNN1-210ENST00000592923 PTPRUQ92729 1446 aa20.53■□□□□ 0.88
CNN1-210ENST00000592923 PLIN1O60240 522 aa20.53■□□□□ 0.88
CNN1-210ENST00000592923 U2AF1L5P0DN76 240 aaPredicted RBP20.53■□□□□ 0.88
CNN1-210ENST00000592923 U2AF1Q01081 240 aaKnown RBP eCLIP20.53■□□□□ 0.88
CNN1-210ENST00000592923 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.53■□□□□ 0.88
CNN1-210ENST00000592923 DMRT2Q9Y5R5 561 aa20.53■□□□□ 0.88
CNN1-210ENST00000592923 CEP170BQ9Y4F5 1589 aaPredicted RBP20.52■□□□□ 0.88
CNN1-210ENST00000592923 CCDC61Q9Y6R9 512 aa20.51■□□□□ 0.87
CNN1-210ENST00000592923 XRN1Q8IZH2 1706 aaKnown RBP20.51■□□□□ 0.87
CNN1-210ENST00000592923 WDR63Q8IWG1 891 aa20.5■□□□□ 0.87
CNN1-210ENST00000592923 CRBNQ96SW2 442 aa20.5■□□□□ 0.87
CNN1-210ENST00000592923 RIMS1Q86UR5 1692 aaKnown RBP20.5■□□□□ 0.87
CNN1-210ENST00000592923 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.49■□□□□ 0.87
CNN1-210ENST00000592923 ANP32EQ9BTT0 268 aa20.49■□□□□ 0.87
CNN1-210ENST00000592923 CDK12Q9NYV4 1490 aaPredicted RBP20.49■□□□□ 0.87
CNN1-210ENST00000592923 PRR36Q9H6K5 1346 aa20.48■□□□□ 0.87
CNN1-210ENST00000592923 THEMISQ8N1K5 641 aaPredicted RBP20.48■□□□□ 0.87
CNN1-210ENST00000592923 ZNF142P52746 1687 aaPredicted RBP20.48■□□□□ 0.87
CNN1-210ENST00000592923 AATKQ6ZMQ8 1374 aa20.48■□□□□ 0.87
CNN1-210ENST00000592923 RRP7AQ9Y3A4 280 aaKnown RBP20.48■□□□□ 0.87
CNN1-210ENST00000592923 TBX22Q9Y458 520 aa20.48■□□□□ 0.87
CNN1-210ENST00000592923 MAP2P11137 1827 aaKnown RBP20.48■□□□□ 0.87
CNN1-210ENST00000592923 PLEKHF1Q96S99 279 aa20.47■□□□□ 0.87
CNN1-210ENST00000592923 DIAPH1O60610 1272 aaKnown RBP20.46■□□□□ 0.87
CNN1-210ENST00000592923 LRRC7Q96NW7 1537 aa20.46■□□□□ 0.87
CNN1-210ENST00000592923 U2SURPO15042 1029 aaKnown RBP20.45■□□□□ 0.86
CNN1-210ENST00000592923 C20orf194Q5TEA3 1177 aa20.45■□□□□ 0.86
CNN1-210ENST00000592923 ZNF692Q9BU19 519 aaPredicted RBP20.45■□□□□ 0.86
CNN1-210ENST00000592923 NEUROD2Q15784 382 aa20.44■□□□□ 0.86
CNN1-210ENST00000592923 SLC26A8Q96RN1 970 aa20.44■□□□□ 0.86
CNN1-210ENST00000592923 POLKQ9UBT6 870 aa20.43■□□□□ 0.86
CNN1-210ENST00000592923 MAPK8IP3Q9UPT6 1336 aa20.43■□□□□ 0.86
CNN1-210ENST00000592923 NME9Q86XW9 330 aa20.43■□□□□ 0.86
CNN1-210ENST00000592923 PNNQ9H307 717 aaKnown RBP20.43■□□□□ 0.86
CNN1-210ENST00000592923 ADAMTSL3P82987 1691 aa20.42■□□□□ 0.86
CNN1-210ENST00000592923 NALCNQ8IZF0 1738 aa20.42■□□□□ 0.86
CNN1-210ENST00000592923 NCKAP5LQ9HCH0 1330 aa20.42■□□□□ 0.86
CNN1-210ENST00000592923 PIK3R4Q99570 1358 aa20.41■□□□□ 0.86
CNN1-210ENST00000592923 MYH16Q9H6N6 1097 aa20.41■□□□□ 0.86
CNN1-210ENST00000592923 AMOTL2Q9Y2J4 779 aa20.41■□□□□ 0.86
CNN1-210ENST00000592923 PLEKHG3A1L390 1219 aa20.4■□□□□ 0.86
CNN1-210ENST00000592923 PLPPR3Q6T4P5 718 aa20.4■□□□□ 0.86
CNN1-210ENST00000592923 COG3Q96JB2 828 aa20.4■□□□□ 0.86
CNN1-210ENST00000592923 USP6P35125 1406 aa20.4■□□□□ 0.86
CNN1-210ENST00000592923 TMPOP42166 694 aaKnown RBP20.39■□□□□ 0.86
CNN1-210ENST00000592923 OVOS2A0A0J9YW53 1432 aa20.39■□□□□ 0.85
CNN1-210ENST00000592923 OVOS2Q6IE36 1432 aa20.39■□□□□ 0.85
CNN1-210ENST00000592923 BCAR3O75815 825 aa20.38■□□□□ 0.85
CNN1-210ENST00000592923 FCHSD2O94868 740 aa20.38■□□□□ 0.85
CNN1-210ENST00000592923 FANCIQ9NVI1 1328 aa20.38■□□□□ 0.85
CNN1-210ENST00000592923 IL16Q14005 1332 aa20.37■□□□□ 0.85
CNN1-210ENST00000592923 ACEP12821 1306 aa20.36■□□□□ 0.85
CNN1-210ENST00000592923 TTC21BQ7Z4L5 1316 aa20.36■□□□□ 0.85
CNN1-210ENST00000592923 SSH2Q76I76 1423 aa20.35■□□□□ 0.85
CNN1-210ENST00000592923 ANKARQ7Z5J8 1434 aa20.35■□□□□ 0.85
CNN1-210ENST00000592923 PDE3AQ14432 1141 aa20.35■□□□□ 0.85
CNN1-210ENST00000592923 RSPH6AQ9H0K4 717 aa20.35■□□□□ 0.85
CNN1-210ENST00000592923 ZRANB1Q9UGI0 708 aa20.35■□□□□ 0.85
CNN1-210ENST00000592923 TRIM35Q9UPQ4 493 aa20.35■□□□□ 0.85
CNN1-210ENST00000592923 EMILIN1Q9Y6C2 1016 aa20.35■□□□□ 0.85
CNN1-210ENST00000592923 CT47B1P0C2W7 299 aaPredicted RBP20.34■□□□□ 0.85
CNN1-210ENST00000592923 RARSP54136 660 aaKnown RBP20.34■□□□□ 0.85
CNN1-210ENST00000592923 FMN2Q9NZ56 1722 aa20.34■□□□□ 0.85
CNN1-210ENST00000592923 KDM2BQ8NHM5 1336 aa20.34■□□□□ 0.85
CNN1-210ENST00000592923 PPM1GO15355 546 aaPredicted RBP20.33■□□□□ 0.85
CNN1-210ENST00000592923 TCERG1O14776 1098 aaKnown RBP20.32■□□□□ 0.84
CNN1-210ENST00000592923 FBLN1P23142 703 aa20.32■□□□□ 0.84
CNN1-210ENST00000592923 IL13P35225 146 aa20.32■□□□□ 0.84
CNN1-210ENST00000592923 CHD2O14647 1828 aaKnown RBP20.31■□□□□ 0.84
CNN1-210ENST00000592923 PRKAR2BP31323 418 aa20.31■□□□□ 0.84
CNN1-210ENST00000592923 USP31Q70CQ4 1352 aa20.31■□□□□ 0.84
CNN1-210ENST00000592923 CENPQQ7L2Z9 268 aaPredicted RBP20.31■□□□□ 0.84
CNN1-210ENST00000592923 RGPD8O14715 1765 aaPredicted RBP20.3■□□□□ 0.84
CNN1-210ENST00000592923 TTC21AQ8NDW8 1320 aa20.3■□□□□ 0.84
CNN1-210ENST00000592923 NEFMP07197 916 aa20.3■□□□□ 0.84
CNN1-210ENST00000592923 CANXP27824 592 aaKnown RBP20.3■□□□□ 0.84
CNN1-210ENST00000592923 RIPK4P57078 832 aa20.3■□□□□ 0.84
CNN1-210ENST00000592923 MS4A1P11836 297 aa20.28■□□□□ 0.84
CNN1-210ENST00000592923 PEAK1Q9H792 1746 aa20.28■□□□□ 0.84
CNN1-210ENST00000592923 SETD1BQ9UPS6 1966 aaKnown RBP20.28■□□□□ 0.84
CNN1-210ENST00000592923 USP54Q70EL1 1684 aa20.28■□□□□ 0.84
CNN1-210ENST00000592923 RRS1Q15050 365 aaKnown RBP20.27■□□□□ 0.84
CNN1-210ENST00000592923 NUTM2FA1L443 756 aa20.27■□□□□ 0.84
CNN1-210ENST00000592923 PIK3C2AO00443 1686 aa20.27■□□□□ 0.83
CNN1-210ENST00000592923 RGPD1P0DJD0 1748 aa20.26■□□□□ 0.83
CNN1-210ENST00000592923 KCNA6P17658 529 aa20.26■□□□□ 0.83
CNN1-210ENST00000592923 NFE2L2Q16236 605 aa20.26■□□□□ 0.83
CNN1-210ENST00000592923 ANKLE2Q86XL3 938 aa20.25■□□□□ 0.83
CNN1-210ENST00000592923 TSR2Q969E8 191 aaKnown RBP20.25■□□□□ 0.83
CNN1-210ENST00000592923 AAMPQ13685 434 aa20.25■□□□□ 0.83
CNN1-210ENST00000592923 HMOX1P09601 288 aa20.23■□□□□ 0.83
CNN1-210ENST00000592923 DLG5Q8TDM6 1919 aa20.23■□□□□ 0.83
CNN1-210ENST00000592923 FRAT1Q92837 279 aaPredicted RBP20.23■□□□□ 0.83
CNN1-210ENST00000592923 CALD1Q05682 793 aaKnown RBP20.22■□□□□ 0.83
CNN1-210ENST00000592923 EXOSC9Q06265 439 aaKnown RBP20.22■□□□□ 0.83
CNN1-210ENST00000592923 PANK1Q8TE04 598 aa20.22■□□□□ 0.83
CNN1-210ENST00000592923 PHACTR3Q96KR7 559 aa20.21■□□□□ 0.83
CNN1-210ENST00000592923 MARF1Q9Y4F3 1742 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms