RNA–Protein interactions for RNA: ENST00000591666.5

SAFB-209, Transcript of scaffold attachment factor B, human

TSL 3

Gene SAFB, Length 632 nt, Biotype retained intron, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAFB-209	ENST00000591666	SLC24A1	O60721	1099 aa		27.96	■■■□□ 2.07
SAFB-209	ENST00000591666	TESK2	Q96S53	571 aa		27.95	■■■□□ 2.06
SAFB-209	ENST00000591666	FNBP4	Q8N3X1	1017 aa	Predicted RBP	27.93	■■■□□ 2.06
SAFB-209	ENST00000591666	ALS2	Q96Q42	1657 aa		27.93	■■■□□ 2.06
SAFB-209	ENST00000591666	BRD4	O60885	1362 aa	Predicted RBP	27.92	■■■□□ 2.06
SAFB-209	ENST00000591666	PUS7	Q96PZ0	661 aa	Known RBP	27.9	■■■□□ 2.06
SAFB-209	ENST00000591666	USP21	Q9UK80	565 aa		27.9	■■■□□ 2.06
SAFB-209	ENST00000591666	USP6	P35125	1406 aa		27.9	■■■□□ 2.06
SAFB-209	ENST00000591666	ABTB2	Q8N961	1025 aa		27.88	■■■□□ 2.05
SAFB-209	ENST00000591666	ZNF692	Q9BU19	519 aa	Predicted RBP	27.88	■■■□□ 2.05
SAFB-209	ENST00000591666	QTRT2	Q9H974	415 aa	Known RBP	27.87	■■■□□ 2.05
SAFB-209	ENST00000591666	RXRB	P28702	533 aa		27.86	■■■□□ 2.05
SAFB-209	ENST00000591666	NUTM2G	Q5VZR2	741 aa		27.86	■■■□□ 2.05
SAFB-209	ENST00000591666	TMC1	Q8TDI8	760 aa		27.85	■■■□□ 2.05
SAFB-209	ENST00000591666	TMF1	P82094	1093 aa		27.84	■■■□□ 2.05
SAFB-209	ENST00000591666	TRPC5	Q9UL62	973 aa	Predicted RBP	27.84	■■■□□ 2.05
SAFB-209	ENST00000591666	ABCA3	Q99758	1704 aa		27.84	■■■□□ 2.05
SAFB-209	ENST00000591666	CPSF1	Q10570	1443 aa	Known RBP	27.84	■■■□□ 2.05
SAFB-209	ENST00000591666	MARF1	Q9Y4F3	1742 aa	Known RBP	27.83	■■■□□ 2.05
SAFB-209	ENST00000591666	SSH2	Q76I76	1423 aa		27.83	■■■□□ 2.05
SAFB-209	ENST00000591666	BCL9L	Q86UU0	1499 aa		27.83	■■■□□ 2.04
SAFB-209	ENST00000591666	SLIT2	O94813	1529 aa		27.82	■■■□□ 2.04
SAFB-209	ENST00000591666	RBM6	P78332	1123 aa	Known RBP	27.81	■■■□□ 2.04
SAFB-209	ENST00000591666	NLRP13	Q86W25	1043 aa		27.81	■■■□□ 2.04
SAFB-209	ENST00000591666	KTN1	Q86UP2	1357 aa	Known RBP	27.81	■■■□□ 2.04
SAFB-209	ENST00000591666	UNC5CL	Q8IV45	518 aa		27.8	■■■□□ 2.04
SAFB-209	ENST00000591666	SLC12A5	Q9H2X9	1139 aa		27.8	■■■□□ 2.04
SAFB-209	ENST00000591666	ATRN	O75882	1429 aa		27.79	■■■□□ 2.04
SAFB-209	ENST00000591666	NINL	Q9Y2I6	1382 aa		27.79	■■■□□ 2.04
SAFB-209	ENST00000591666	USP19	O94966	1318 aa		27.79	■■■□□ 2.04
SAFB-209	ENST00000591666	TTC21B	Q7Z4L5	1316 aa		27.79	■■■□□ 2.04
SAFB-209	ENST00000591666	FAM83G	A6ND36	823 aa		27.79	■■■□□ 2.04
SAFB-209	ENST00000591666	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	27.79	■■■□□ 2.04
SAFB-209	ENST00000591666	CDCA8	Q53HL2	280 aa		27.78	■■■□□ 2.04
SAFB-209	ENST00000591666	TERF2IP	Q9NYB0	399 aa		27.78	■■■□□ 2.04
SAFB-209	ENST00000591666	TTC21A	Q8NDW8	1320 aa		27.77	■■■□□ 2.04
SAFB-209	ENST00000591666	CD163L1	Q9NR16	1453 aa		27.76	■■■□□ 2.04
SAFB-209	ENST00000591666	NLRP6	P59044	892 aa		27.76	■■■□□ 2.03
SAFB-209	ENST00000591666	PRDM11	Q9NQV5	511 aa		27.76	■■■□□ 2.03
SAFB-209	ENST00000591666	CRYBG1	Q9Y4K1	1723 aa		27.75	■■■□□ 2.03
SAFB-209	ENST00000591666	EIF4G2	P78344	907 aa	Known RBP eCLIP	27.75	■■■□□ 2.03
SAFB-209	ENST00000591666	CDK12	Q9NYV4	1490 aa	Predicted RBP	27.75	■■■□□ 2.03
SAFB-209	ENST00000591666	KIAA0232	Q92628	1395 aa		27.74	■■■□□ 2.03
SAFB-209	ENST00000591666	AKAP12	Q02952	1782 aa		27.73	■■■□□ 2.03
SAFB-209	ENST00000591666		A0A1W2PP64	1363 aa		27.73	■■■□□ 2.03
SAFB-209	ENST00000591666	PHRF1	Q9P1Y6	1649 aa	Known RBP	27.72	■■■□□ 2.03
SAFB-209	ENST00000591666	GC	P02774	474 aa		27.72	■■■□□ 2.03
SAFB-209	ENST00000591666	ZC3H6	P61129	1189 aa	Known RBP	27.72	■■■□□ 2.03
SAFB-209	ENST00000591666	BTG4	Q9NY30	223 aa		27.71	■■■□□ 2.03
SAFB-209	ENST00000591666	NRK	Q7Z2Y5	1582 aa		27.7	■■■□□ 2.03
SAFB-209	ENST00000591666	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	27.7	■■■□□ 2.02
SAFB-209	ENST00000591666	GJD4	Q96KN9	370 aa	Predicted RBP	27.7	■■■□□ 2.02
SAFB-209	ENST00000591666	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	27.7	■■■□□ 2.02
SAFB-209	ENST00000591666	EDC4	Q6P2E9	1401 aa	Known RBP	27.69	■■■□□ 2.02
SAFB-209	ENST00000591666	COL14A1	Q05707	1796 aa	Known RBP	27.69	■■■□□ 2.02
SAFB-209	ENST00000591666	HSPA5	P11021	654 aa	Known RBP	27.69	■■■□□ 2.02
SAFB-209	ENST00000591666	VPS72	Q15906	364 aa		27.69	■■■□□ 2.02
SAFB-209	ENST00000591666	CPD	O75976	1380 aa		27.69	■■■□□ 2.02
SAFB-209	ENST00000591666	PIK3C2A	O00443	1686 aa		27.68	■■■□□ 2.02
SAFB-209	ENST00000591666	PLCH1	Q4KWH8	1693 aa		27.68	■■■□□ 2.02
SAFB-209	ENST00000591666	RGS12	O14924	1447 aa		27.68	■■■□□ 2.02
SAFB-209	ENST00000591666	MON2	Q7Z3U7	1717 aa		27.68	■■■□□ 2.02
SAFB-209	ENST00000591666	NWD2	Q9ULI1	1742 aa		27.68	■■■□□ 2.02
SAFB-209	ENST00000591666	CHRNA2	Q15822	529 aa		27.68	■■■□□ 2.02
SAFB-209	ENST00000591666	ANKRD36B	Q8N2N9	1353 aa		27.66	■■■□□ 2.02
SAFB-209	ENST00000591666	SLIT3	O75094	1523 aa		27.66	■■■□□ 2.02
SAFB-209	ENST00000591666	CCDC9	Q9Y3X0	531 aa	Known RBP	27.65	■■■□□ 2.02
SAFB-209	ENST00000591666	KCNH5	Q8NCM2	988 aa		27.64	■■■□□ 2.02
SAFB-209	ENST00000591666	USP31	Q70CQ4	1352 aa		27.63	■■■□□ 2.01
SAFB-209	ENST00000591666	NME9	Q86XW9	330 aa		27.63	■■■□□ 2.01
SAFB-209	ENST00000591666	ZEB1	P37275	1124 aa	Predicted RBP	27.6	■■■□□ 2.01
SAFB-209	ENST00000591666	NRAP	Q86VF7	1730 aa		27.59	■■■□□ 2.01
SAFB-209	ENST00000591666	ZBTB7C	A1YPR0	619 aa		27.59	■■■□□ 2.01
SAFB-209	ENST00000591666	ZRANB1	Q9UGI0	708 aa		27.59	■■■□□ 2.01
SAFB-209	ENST00000591666	GLI3	P10071	1580 aa		27.58	■■■□□ 2.01
SAFB-209	ENST00000591666	SOX12	O15370	315 aa		27.58	■■■□□ 2.01
SAFB-209	ENST00000591666	STRN4	Q9NRL3	753 aa		27.57	■■■□□ 2
SAFB-209	ENST00000591666	EVA1C	P58658	441 aa		27.56	■■■□□ 2
SAFB-209	ENST00000591666	POLR3GL	Q9BT43	218 aa		27.56	■■■□□ 2
SAFB-209	ENST00000591666	AATK	Q6ZMQ8	1374 aa		27.56	■■■□□ 2
SAFB-209	ENST00000591666	SPATA31A5	Q5VU36	1347 aa		27.55	■■■□□ 2
SAFB-209	ENST00000591666	SPATA31A7	Q8IWB4	1347 aa		27.55	■■■□□ 2
SAFB-209	ENST00000591666	ARHGEF25	Q86VW2	580 aa		27.54	■■■□□ 2
SAFB-209	ENST00000591666	CAMTA1	Q9Y6Y1	1673 aa		27.53	■■■□□ 2
SAFB-209	ENST00000591666	OVOS2	A0A0J9YW53	1432 aa		27.53	■■■□□ 2
SAFB-209	ENST00000591666	OVOS2	Q6IE36	1432 aa		27.53	■■■□□ 2
SAFB-209	ENST00000591666	LMO7	Q8WWI1	1683 aa		27.52	■■■□□ 2
SAFB-209	ENST00000591666	NFAT5	O94916	1531 aa		27.52	■■■□□ 2
SAFB-209	ENST00000591666	ONECUT3	O60422	494 aa	Predicted RBP	27.51	■■□□□ 1.99
SAFB-209	ENST00000591666	COG3	Q96JB2	828 aa		27.51	■■□□□ 1.99
SAFB-209	ENST00000591666	USP54	Q70EL1	1684 aa		27.51	■■□□□ 1.99
SAFB-209	ENST00000591666	FAM98C	Q17RN3	349 aa	Known RBP	27.5	■■□□□ 1.99
SAFB-209	ENST00000591666	SEPT12	Q8IYM1	358 aa		27.5	■■□□□ 1.99
SAFB-209	ENST00000591666	SPATA31A1	Q5TZJ5	1347 aa		27.49	■■□□□ 1.99
SAFB-209	ENST00000591666	LARP1	Q6PKG0	1096 aa	Known RBP	27.49	■■□□□ 1.99
SAFB-209	ENST00000591666	COL5A2	P05997	1499 aa	Predicted RBP	27.49	■■□□□ 1.99
SAFB-209	ENST00000591666	MYOM1	P52179	1685 aa		27.49	■■□□□ 1.99
SAFB-209	ENST00000591666		A0A0G2JS52	829 aa		27.48	■■□□□ 1.99
SAFB-209	ENST00000591666	MYT1	Q01538	1121 aa		27.48	■■□□□ 1.99
SAFB-209	ENST00000591666	FYB1	O15117	783 aa		27.46	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms