RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 WWC1Q8IX03 1113 aa13.59□□□□□ -0.23
VPS25-206ENST00000591584 COG3Q96JB2 828 aa13.59□□□□□ -0.23
VPS25-206ENST00000591584 SLC26A8Q96RN1 970 aa13.59□□□□□ -0.23
VPS25-206ENST00000591584 CEP170BQ9Y4F5 1589 aaPredicted RBP13.58□□□□□ -0.23
VPS25-206ENST00000591584 FCHSD2O94868 740 aa13.58□□□□□ -0.24
VPS25-206ENST00000591584 TCP11L2Q8N4U5 519 aa13.58□□□□□ -0.24
VPS25-206ENST00000591584 PTPRUQ92729 1446 aa13.57□□□□□ -0.24
VPS25-206ENST00000591584 SENP3-EIF4A1A0A087X0R7 540 aa13.57□□□□□ -0.24
VPS25-206ENST00000591584 NEFMP07197 916 aa13.57□□□□□ -0.24
VPS25-206ENST00000591584 SHPRHQ149N8 1683 aa13.56□□□□□ -0.24
VPS25-206ENST00000591584 NKTRP30414 1462 aaKnown RBP13.56□□□□□ -0.24
VPS25-206ENST00000591584 CT47B1P0C2W7 299 aaPredicted RBP13.56□□□□□ -0.24
VPS25-206ENST00000591584 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.56□□□□□ -0.24
VPS25-206ENST00000591584 CCDC136Q96JN2 1154 aa13.56□□□□□ -0.24
VPS25-206ENST00000591584 ADAMTSL3P82987 1691 aa13.56□□□□□ -0.24
VPS25-206ENST00000591584 SETD1BQ9UPS6 1966 aaKnown RBP13.55□□□□□ -0.24
VPS25-206ENST00000591584 MYH16Q9H6N6 1097 aa13.55□□□□□ -0.24
VPS25-206ENST00000591584 POLKQ9UBT6 870 aa13.55□□□□□ -0.24
VPS25-206ENST00000591584 TTC21AQ8NDW8 1320 aa13.55□□□□□ -0.24
VPS25-206ENST00000591584 PRR36Q9H6K5 1346 aa13.55□□□□□ -0.24
VPS25-206ENST00000591584 MAPK8IP3Q9UPT6 1336 aa13.55□□□□□ -0.24
VPS25-206ENST00000591584 KIF20BQ96Q89 1820 aa13.55□□□□□ -0.24
VPS25-206ENST00000591584 ANKARQ7Z5J8 1434 aa13.55□□□□□ -0.24
VPS25-206ENST00000591584 COL3A1P02461 1466 aaPredicted RBP13.55□□□□□ -0.24
VPS25-206ENST00000591584 PLEKHF1Q96S99 279 aa13.54□□□□□ -0.24
VPS25-206ENST00000591584 IL16Q14005 1332 aa13.54□□□□□ -0.24
VPS25-206ENST00000591584 TTC21BQ7Z4L5 1316 aa13.54□□□□□ -0.24
VPS25-206ENST00000591584 IQSEC2Q5JU85 1478 aa13.54□□□□□ -0.24
VPS25-206ENST00000591584 U2SURPO15042 1029 aaKnown RBP13.53□□□□□ -0.24
VPS25-206ENST00000591584 ACEP12821 1306 aa13.53□□□□□ -0.24
VPS25-206ENST00000591584 B4GALNT3Q6L9W6 998 aa13.52□□□□□ -0.25
VPS25-206ENST00000591584 TSHZ2Q9NRE2 1034 aa13.52□□□□□ -0.25
VPS25-206ENST00000591584 RIMS1Q86UR5 1692 aaKnown RBP13.52□□□□□ -0.25
VPS25-206ENST00000591584 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.52□□□□□ -0.25
VPS25-206ENST00000591584 MON2Q7Z3U7 1717 aa13.51□□□□□ -0.25
VPS25-206ENST00000591584 ZNF142P52746 1687 aaPredicted RBP13.51□□□□□ -0.25
VPS25-206ENST00000591584 CDK12Q9NYV4 1490 aaPredicted RBP13.51□□□□□ -0.25
VPS25-206ENST00000591584 NME9Q86XW9 330 aa13.51□□□□□ -0.25
VPS25-206ENST00000591584 USP6P35125 1406 aa13.5□□□□□ -0.25
VPS25-206ENST00000591584 TMPOP42166 694 aaKnown RBP13.5□□□□□ -0.25
VPS25-206ENST00000591584 CALD1Q05682 793 aaKnown RBP13.5□□□□□ -0.25
VPS25-206ENST00000591584 AAMPQ13685 434 aa13.5□□□□□ -0.25
VPS25-206ENST00000591584 AKAP12Q02952 1782 aa13.5□□□□□ -0.25
VPS25-206ENST00000591584 XRN1Q8IZH2 1706 aaKnown RBP13.5□□□□□ -0.25
VPS25-206ENST00000591584 NGDNQ8NEJ9 315 aaKnown RBP13.49□□□□□ -0.25
VPS25-206ENST00000591584 SSH2Q76I76 1423 aa13.48□□□□□ -0.25
VPS25-206ENST00000591584 USP31Q70CQ4 1352 aa13.48□□□□□ -0.25
VPS25-206ENST00000591584 ITSN1Q15811 1721 aa13.48□□□□□ -0.25
VPS25-206ENST00000591584 TOPAZ1Q8N9V7 1692 aa13.48□□□□□ -0.25
VPS25-206ENST00000591584 KCNA6P17658 529 aa13.48□□□□□ -0.25
VPS25-206ENST00000591584 IL13P35225 146 aa13.48□□□□□ -0.25
VPS25-206ENST00000591584 PDE3AQ14432 1141 aa13.48□□□□□ -0.25
VPS25-206ENST00000591584 NEUROD2Q15784 382 aa13.48□□□□□ -0.25
VPS25-206ENST00000591584 EXOC6Q8TAG9 804 aa13.48□□□□□ -0.25
VPS25-206ENST00000591584 SPINK5Q9NQ38 1064 aaPredicted RBP13.48□□□□□ -0.25
VPS25-206ENST00000591584 LMOD3Q0VAK6 560 aa13.47□□□□□ -0.25
VPS25-206ENST00000591584 RSPH6AQ9H0K4 717 aa13.47□□□□□ -0.25
VPS25-206ENST00000591584 NCKAP5LQ9HCH0 1330 aa13.46□□□□□ -0.25
VPS25-206ENST00000591584 PPM1GO15355 546 aaPredicted RBP13.46□□□□□ -0.25
VPS25-206ENST00000591584 MS4A1P11836 297 aa13.46□□□□□ -0.25
VPS25-206ENST00000591584 RIPK4P57078 832 aa13.46□□□□□ -0.25
VPS25-206ENST00000591584 ZNF428Q96B54 188 aa13.46□□□□□ -0.25
VPS25-206ENST00000591584 OVOS2A0A0J9YW53 1432 aa13.46□□□□□ -0.26
VPS25-206ENST00000591584 NPHP4O75161 1426 aaPredicted RBP13.46□□□□□ -0.26
VPS25-206ENST00000591584 OVOS2Q6IE36 1432 aa13.46□□□□□ -0.26
VPS25-206ENST00000591584 KIF24Q5T7B8 1368 aa13.45□□□□□ -0.26
VPS25-206ENST00000591584 RRP7AQ9Y3A4 280 aaKnown RBP13.45□□□□□ -0.26
VPS25-206ENST00000591584 EMILIN1Q9Y6C2 1016 aa13.45□□□□□ -0.26
VPS25-206ENST00000591584 CRBNQ96SW2 442 aa13.44□□□□□ -0.26
VPS25-206ENST00000591584 TRIM35Q9UPQ4 493 aa13.44□□□□□ -0.26
VPS25-206ENST00000591584 PLIN1O60240 522 aa13.43□□□□□ -0.26
VPS25-206ENST00000591584 PRKAR2BP31323 418 aa13.43□□□□□ -0.26
VPS25-206ENST00000591584 NFE2L2Q16236 605 aa13.43□□□□□ -0.26
VPS25-206ENST00000591584 DMRT2Q9Y5R5 561 aa13.43□□□□□ -0.26
VPS25-206ENST00000591584 NRKQ7Z2Y5 1582 aa13.42□□□□□ -0.26
VPS25-206ENST00000591584 RARSP54136 660 aaKnown RBP13.42□□□□□ -0.26
VPS25-206ENST00000591584 CHD2O14647 1828 aaKnown RBP13.41□□□□□ -0.26
VPS25-206ENST00000591584 LRRC7Q96NW7 1537 aa13.41□□□□□ -0.26
VPS25-206ENST00000591584 PMFBP1Q8TBY8 1022 aa13.41□□□□□ -0.26
VPS25-206ENST00000591584 ZRANB1Q9UGI0 708 aa13.41□□□□□ -0.26
VPS25-206ENST00000591584 MAP2P11137 1827 aaKnown RBP13.41□□□□□ -0.26
VPS25-206ENST00000591584 ADGRL3Q9HAR2 1447 aa13.4□□□□□ -0.26
VPS25-206ENST00000591584 NUTM2FA1L443 756 aa13.4□□□□□ -0.26
VPS25-206ENST00000591584 TCERG1O14776 1098 aaKnown RBP13.4□□□□□ -0.26
VPS25-206ENST00000591584 CANXP27824 592 aaKnown RBP13.4□□□□□ -0.26
VPS25-206ENST00000591584 RRS1Q15050 365 aaKnown RBP13.4□□□□□ -0.26
VPS25-206ENST00000591584 PHF8Q9UPP1 1060 aa13.4□□□□□ -0.26
VPS25-206ENST00000591584 BCAR3O75815 825 aa13.39□□□□□ -0.27
VPS25-206ENST00000591584 GNAI1P63096 354 aa13.39□□□□□ -0.27
VPS25-206ENST00000591584 CENPQQ7L2Z9 268 aaPredicted RBP13.39□□□□□ -0.27
VPS25-206ENST00000591584 RBM19Q9Y4C8 960 aaKnown RBP13.39□□□□□ -0.27
VPS25-206ENST00000591584 SBNO1A3KN83 1393 aa13.39□□□□□ -0.27
VPS25-206ENST00000591584 FANCIQ9NVI1 1328 aa13.39□□□□□ -0.27
VPS25-206ENST00000591584 FLT4P35916 1363 aa13.38□□□□□ -0.27
VPS25-206ENST00000591584 FBLN1P23142 703 aa13.38□□□□□ -0.27
VPS25-206ENST00000591584 HAP1P54257 671 aaPredicted RBP13.38□□□□□ -0.27
VPS25-206ENST00000591584 EIF4A2Q14240 407 aaKnown RBP13.38□□□□□ -0.27
VPS25-206ENST00000591584 ALDH1L2Q3SY69 923 aa13.38□□□□□ -0.27
VPS25-206ENST00000591584 IFT57Q9NWB7 429 aa13.38□□□□□ -0.27
VPS25-206ENST00000591584 FMN2Q9NZ56 1722 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms