RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 XPCQ01831 940 aaPredicted RBP13.89□□□□□ -0.19
BRCA1-226ENST00000591534 C14orf93Q9H972 538 aaKnown RBP13.89□□□□□ -0.19
BRCA1-226ENST00000591534 PIK3C2GO75747 1445 aa13.89□□□□□ -0.19
BRCA1-226ENST00000591534 YTHDC2Q9H6S0 1430 aaKnown RBP13.89□□□□□ -0.19
BRCA1-226ENST00000591534 PXDNQ92626 1479 aa13.88□□□□□ -0.19
BRCA1-226ENST00000591534 PAXIP1Q6ZW49 1069 aaPredicted RBP13.88□□□□□ -0.19
BRCA1-226ENST00000591534 KRT28Q7Z3Y7 464 aa13.88□□□□□ -0.19
BRCA1-226ENST00000591534 GJD4Q96KN9 370 aaPredicted RBP13.88□□□□□ -0.19
BRCA1-226ENST00000591534 COL22A1Q8NFW1 1626 aaPredicted RBP13.88□□□□□ -0.19
BRCA1-226ENST00000591534 SPATA31A3Q5VYP0 1347 aa13.88□□□□□ -0.19
BRCA1-226ENST00000591534 UNC5CLQ8IV45 518 aa13.87□□□□□ -0.19
BRCA1-226ENST00000591534 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.87□□□□□ -0.19
BRCA1-226ENST00000591534 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
BRCA1-226ENST00000591534 CFAP44Q96MT7 982 aa13.86□□□□□ -0.19
BRCA1-226ENST00000591534 POGKQ9P215 609 aa13.86□□□□□ -0.19
BRCA1-226ENST00000591534 PHF8Q9UPP1 1060 aa13.86□□□□□ -0.19
BRCA1-226ENST00000591534 RNF25Q96BH1 459 aaPredicted RBP13.85□□□□□ -0.19
BRCA1-226ENST00000591534 BCL9LQ86UU0 1499 aa13.85□□□□□ -0.19
BRCA1-226ENST00000591534 PLEKHH1Q9ULM0 1364 aa13.84□□□□□ -0.19
BRCA1-226ENST00000591534 RASEFQ8IZ41 740 aa13.84□□□□□ -0.19
BRCA1-226ENST00000591534 CFAP70Q5T0N1 1121 aa13.83□□□□□ -0.2
BRCA1-226ENST00000591534 CHADLQ6NUI6 762 aa13.83□□□□□ -0.2
BRCA1-226ENST00000591534 LMOD2Q6P5Q4 547 aa13.83□□□□□ -0.2
BRCA1-226ENST00000591534 STAC3Q96MF2 364 aa13.83□□□□□ -0.2
BRCA1-226ENST00000591534 PRAM1Q96QH2 718 aa13.83□□□□□ -0.2
BRCA1-226ENST00000591534 ARHGEF10O15013 1369 aa13.83□□□□□ -0.2
BRCA1-226ENST00000591534 SF3B2Q13435 895 aaKnown RBP13.82□□□□□ -0.2
BRCA1-226ENST00000591534 SBNO1A3KN83 1393 aa13.82□□□□□ -0.2
BRCA1-226ENST00000591534 EIF3AQ14152 1382 aaKnown RBP13.82□□□□□ -0.2
BRCA1-226ENST00000591534 KIF1AQ12756 1690 aa13.82□□□□□ -0.2
BRCA1-226ENST00000591534 KNDC1Q76NI1 1749 aa13.81□□□□□ -0.2
BRCA1-226ENST00000591534 SP7Q8TDD2 431 aaPredicted RBP13.81□□□□□ -0.2
BRCA1-226ENST00000591534 TNS3Q68CZ2 1445 aa13.81□□□□□ -0.2
BRCA1-226ENST00000591534 SAFB2Q14151 953 aaKnown RBP eCLIP13.8□□□□□ -0.21e-6■□□□□ 10.7
BRCA1-226ENST00000591534 FAM212AQ96EL1 285 aa13.8□□□□□ -0.2
BRCA1-226ENST00000591534 CCDC9Q9Y3X0 531 aaKnown RBP13.8□□□□□ -0.2
BRCA1-226ENST00000591534 NRXN1Q9ULB1 1477 aa13.8□□□□□ -0.2
BRCA1-226ENST00000591534 VPS72Q15906 364 aa13.79□□□□□ -0.2
BRCA1-226ENST00000591534 GPRASP1Q5JY77 1395 aa13.79□□□□□ -0.2
BRCA1-226ENST00000591534 ANKARQ7Z5J8 1434 aa13.79□□□□□ -0.2
BRCA1-226ENST00000591534 SLIT2O94813 1529 aa13.79□□□□□ -0.2
BRCA1-226ENST00000591534 IFT172Q9UG01 1749 aa13.78□□□□□ -0.2
BRCA1-226ENST00000591534 RALGAPBQ86X10 1494 aa13.78□□□□□ -0.2
BRCA1-226ENST00000591534 FMN2Q9NZ56 1722 aa13.78□□□□□ -0.2
BRCA1-226ENST00000591534 HAX1O00165 279 aa13.77□□□□□ -0.21
BRCA1-226ENST00000591534 BLMP54132 1417 aaPredicted RBP13.77□□□□□ -0.21
BRCA1-226ENST00000591534 SEPT12Q8IYM1 358 aa13.77□□□□□ -0.21
BRCA1-226ENST00000591534 DLC1Q96QB1 1528 aa13.76□□□□□ -0.21
BRCA1-226ENST00000591534 RAB3GAP2Q9H2M9 1393 aa13.76□□□□□ -0.21
BRCA1-226ENST00000591534 PMFBP1Q8TBY8 1022 aa13.76□□□□□ -0.21
BRCA1-226ENST00000591534 CABLES1Q8TDN4 633 aa13.76□□□□□ -0.21
BRCA1-226ENST00000591534 TRAK1Q9UPV9 953 aa13.76□□□□□ -0.21
BRCA1-226ENST00000591534 SRCAPQ6ZRS2 3230 aa13.75□□□□□ -0.21
BRCA1-226ENST00000591534 A0A0G2JS52 829 aa13.75□□□□□ -0.21
BRCA1-226ENST00000591534 ONECUT3O60422 494 aaPredicted RBP13.75□□□□□ -0.21
BRCA1-226ENST00000591534 MYT1Q01538 1121 aa13.75□□□□□ -0.21
BRCA1-226ENST00000591534 KRT27Q7Z3Y8 459 aa13.75□□□□□ -0.21
BRCA1-226ENST00000591534 DCAF11Q8TEB1 546 aa13.75□□□□□ -0.21
BRCA1-226ENST00000591534 KDM2AQ9Y2K7 1162 aa13.75□□□□□ -0.21
BRCA1-226ENST00000591534 EP400Q96L91 3159 aa13.74□□□□□ -0.21
BRCA1-226ENST00000591534 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.74□□□□□ -0.21
BRCA1-226ENST00000591534 MARF1Q9Y4F3 1742 aaKnown RBP13.74□□□□□ -0.21
BRCA1-226ENST00000591534 HRCP23327 699 aa13.74□□□□□ -0.21
BRCA1-226ENST00000591534 NGDNQ8NEJ9 315 aaKnown RBP13.74□□□□□ -0.21
BRCA1-226ENST00000591534 USP32Q8NFA0 1604 aa13.74□□□□□ -0.21
BRCA1-226ENST00000591534 FAM83GA6ND36 823 aa13.73□□□□□ -0.21
BRCA1-226ENST00000591534 WASLO00401 505 aaPredicted RBP13.73□□□□□ -0.21
BRCA1-226ENST00000591534 SPRYD3Q8NCJ5 442 aa13.73□□□□□ -0.21
BRCA1-226ENST00000591534 HIRIP3Q9BW71 556 aaPredicted RBP13.73□□□□□ -0.21
BRCA1-226ENST00000591534 MINK1Q8N4C8 1332 aaPredicted RBP13.72□□□□□ -0.21
BRCA1-226ENST00000591534 PAK3O75914 559 aaPredicted RBP13.71□□□□□ -0.21
BRCA1-226ENST00000591534 PYGBP11216 843 aa13.71□□□□□ -0.21
BRCA1-226ENST00000591534 BTG4Q9NY30 223 aa13.71□□□□□ -0.21
BRCA1-226ENST00000591534 RIOK3O14730 519 aaKnown RBP13.7□□□□□ -0.22
BRCA1-226ENST00000591534 BAG6P46379 1132 aa13.7□□□□□ -0.22
BRCA1-226ENST00000591534 GLI3P10071 1580 aa13.7□□□□□ -0.22
BRCA1-226ENST00000591534 PRKAR2AP13861 404 aaKnown RBP13.69□□□□□ -0.22
BRCA1-226ENST00000591534 EVX2Q03828 476 aa13.69□□□□□ -0.22
BRCA1-226ENST00000591534 HS6ST3Q8IZP7 471 aa13.69□□□□□ -0.22
BRCA1-226ENST00000591534 ADGRB2O60241 1585 aa13.69□□□□□ -0.22
BRCA1-226ENST00000591534 ADGRB1O14514 1584 aa13.68□□□□□ -0.22
BRCA1-226ENST00000591534 FAM98CQ17RN3 349 aaKnown RBP13.68□□□□□ -0.22
BRCA1-226ENST00000591534 VSIG10Q8N0Z9 540 aa13.68□□□□□ -0.22
BRCA1-226ENST00000591534 PRDM11Q9NQV5 511 aa13.68□□□□□ -0.22
BRCA1-226ENST00000591534 TULP4Q9NRJ4 1543 aa13.68□□□□□ -0.22
BRCA1-226ENST00000591534 NWD2Q9ULI1 1742 aa13.67□□□□□ -0.22
BRCA1-226ENST00000591534 DEFB132Q7Z7B7 95 aa13.67□□□□□ -0.22
BRCA1-226ENST00000591534 NUDT16Q96DE0 195 aaKnown RBP13.66□□□□□ -0.22
BRCA1-226ENST00000591534 TSPYL2Q9H2G4 693 aaPredicted RBP13.66□□□□□ -0.22
BRCA1-226ENST00000591534 TSHZ2Q9NRE2 1034 aa13.66□□□□□ -0.22
BRCA1-226ENST00000591534 PRR36Q9H6K5 1346 aa13.65□□□□□ -0.22
BRCA1-226ENST00000591534 CHRM1P11229 460 aaPredicted RBP13.65□□□□□ -0.22
BRCA1-226ENST00000591534 FARP1Q9Y4F1 1045 aaPredicted RBP13.65□□□□□ -0.22
BRCA1-226ENST00000591534 SPATA31A5Q5VU36 1347 aa13.64□□□□□ -0.23
BRCA1-226ENST00000591534 SPATA31A7Q8IWB4 1347 aa13.64□□□□□ -0.23
BRCA1-226ENST00000591534 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
BRCA1-226ENST00000591534 CDK19Q9BWU1 502 aa13.63□□□□□ -0.23
BRCA1-226ENST00000591534 RGPD8O14715 1765 aaPredicted RBP13.63□□□□□ -0.23
BRCA1-226ENST00000591534 PLCH1Q4KWH8 1693 aa13.63□□□□□ -0.23
BRCA1-226ENST00000591534 EVA1CP58658 441 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms