RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ARHGEF10O15013 1369 aa16.24■□□□□ 0.19
VMP1-211ENST00000591315 ABCA3Q99758 1704 aa16.23■□□□□ 0.19
VMP1-211ENST00000591315 SLC12A5Q9H2X9 1139 aa16.23■□□□□ 0.19
VMP1-211ENST00000591315 TMC1Q8TDI8 760 aa16.22■□□□□ 0.19
VMP1-211ENST00000591315 ATAD2Q6PL18 1390 aa16.22■□□□□ 0.19
VMP1-211ENST00000591315 MARF1Q9Y4F3 1742 aaKnown RBP16.22■□□□□ 0.19
VMP1-211ENST00000591315 USP6P35125 1406 aa16.2■□□□□ 0.18
VMP1-211ENST00000591315 HAP1P54257 671 aaPredicted RBP16.2■□□□□ 0.18
VMP1-211ENST00000591315 CD163L1Q9NR16 1453 aa16.2■□□□□ 0.18
VMP1-211ENST00000591315 AKAP12Q02952 1782 aa16.2■□□□□ 0.18
VMP1-211ENST00000591315 SSH2Q76I76 1423 aa16.19■□□□□ 0.18
VMP1-211ENST00000591315 CRYBG1Q9Y4K1 1723 aa16.19■□□□□ 0.18
VMP1-211ENST00000591315 HSPA5P11021 654 aaKnown RBP16.19■□□□□ 0.18
VMP1-211ENST00000591315 ABTB2Q8N961 1025 aa16.19■□□□□ 0.18
VMP1-211ENST00000591315 CPSF1Q10570 1443 aaKnown RBP16.19■□□□□ 0.18
VMP1-211ENST00000591315 FAM83GA6ND36 823 aa16.18■□□□□ 0.18
VMP1-211ENST00000591315 ZNF772Q68DY9 489 aaPredicted RBP16.18■□□□□ 0.18
VMP1-211ENST00000591315 FNBP4Q8N3X1 1017 aaPredicted RBP16.18■□□□□ 0.18
VMP1-211ENST00000591315 ZRANB1Q9UGI0 708 aa16.18■□□□□ 0.18
VMP1-211ENST00000591315 USP21Q9UK80 565 aa16.18■□□□□ 0.18
VMP1-211ENST00000591315 TMF1P82094 1093 aa16.17■□□□□ 0.18
VMP1-211ENST00000591315 QTRT2Q9H974 415 aaKnown RBP16.17■□□□□ 0.18
VMP1-211ENST00000591315 TTC21BQ7Z4L5 1316 aa16.17■□□□□ 0.18
VMP1-211ENST00000591315 BCL9LQ86UU0 1499 aa16.16■□□□□ 0.18
VMP1-211ENST00000591315 KTN1Q86UP2 1357 aaKnown RBP16.16■□□□□ 0.18
VMP1-211ENST00000591315 PIK3C2AO00443 1686 aa16.15■□□□□ 0.18
VMP1-211ENST00000591315 ZC3H6P61129 1189 aaKnown RBP16.15■□□□□ 0.18
VMP1-211ENST00000591315 PUS7Q96PZ0 661 aaKnown RBP16.15■□□□□ 0.18
VMP1-211ENST00000591315 ZNF692Q9BU19 519 aaPredicted RBP16.15■□□□□ 0.18
VMP1-211ENST00000591315 PHRF1Q9P1Y6 1649 aaKnown RBP16.15■□□□□ 0.18
VMP1-211ENST00000591315 A0A1W2PP64 1363 aa16.14■□□□□ 0.17
VMP1-211ENST00000591315 MON2Q7Z3U7 1717 aa16.14■□□□□ 0.17
VMP1-211ENST00000591315 NRKQ7Z2Y5 1582 aa16.14■□□□□ 0.17
VMP1-211ENST00000591315 NLRP6P59044 892 aa16.14■□□□□ 0.17
VMP1-211ENST00000591315 EIF4G2P78344 907 aaKnown RBP eCLIP16.14■□□□□ 0.17
VMP1-211ENST00000591315 CHRNA2Q15822 529 aa16.14■□□□□ 0.17
VMP1-211ENST00000591315 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.14■□□□□ 0.17
VMP1-211ENST00000591315 USP19O94966 1318 aa16.14■□□□□ 0.17
VMP1-211ENST00000591315 SLIT2O94813 1529 aa16.14■□□□□ 0.17
VMP1-211ENST00000591315 NME9Q86XW9 330 aa16.13■□□□□ 0.17
VMP1-211ENST00000591315 KIAA0232Q92628 1395 aa16.13■□□□□ 0.17
VMP1-211ENST00000591315 PLCH1Q4KWH8 1693 aa16.12■□□□□ 0.17
VMP1-211ENST00000591315 RXRBP28702 533 aa16.12■□□□□ 0.17
VMP1-211ENST00000591315 NLRP13Q86W25 1043 aa16.12■□□□□ 0.17
VMP1-211ENST00000591315 POLR3GLQ9BT43 218 aa16.12■□□□□ 0.17
VMP1-211ENST00000591315 BRD4O60885 1362 aaPredicted RBP16.12■□□□□ 0.17
VMP1-211ENST00000591315 ATRNO75882 1429 aa16.11■□□□□ 0.17
VMP1-211ENST00000591315 C11orf95C9JLR9 678 aaPredicted RBP16.11■□□□□ 0.17
VMP1-211ENST00000591315 HDGFL2Q7Z4V5 671 aaPredicted RBP16.11■□□□□ 0.17
VMP1-211ENST00000591315 UNC5CLQ8IV45 518 aa16.11■□□□□ 0.17
VMP1-211ENST00000591315 PRDM11Q9NQV5 511 aa16.11■□□□□ 0.17
VMP1-211ENST00000591315 SOX12O15370 315 aa16.1■□□□□ 0.17
VMP1-211ENST00000591315 GCP02774 474 aa16.1■□□□□ 0.17
VMP1-211ENST00000591315 BTG4Q9NY30 223 aa16.1■□□□□ 0.17
VMP1-211ENST00000591315 TERF2IPQ9NYB0 399 aa16.1■□□□□ 0.17
VMP1-211ENST00000591315 ZBTB7CA1YPR0 619 aa16.09■□□□□ 0.17
VMP1-211ENST00000591315 SOCS7O14512 581 aa16.09■□□□□ 0.17
VMP1-211ENST00000591315 RBM6P78332 1123 aaKnown RBP16.09■□□□□ 0.17
VMP1-211ENST00000591315 TRPC5Q9UL62 973 aaPredicted RBP16.09■□□□□ 0.17
VMP1-211ENST00000591315 SLC24A1O60721 1099 aa16.08■□□□□ 0.16
VMP1-211ENST00000591315 TTC21AQ8NDW8 1320 aa16.08■□□□□ 0.16
VMP1-211ENST00000591315 MYOM1P52179 1685 aa16.08■□□□□ 0.16
VMP1-211ENST00000591315 NRAPQ86VF7 1730 aa16.08■□□□□ 0.16
VMP1-211ENST00000591315 COL14A1Q05707 1796 aaKnown RBP16.08■□□□□ 0.16
VMP1-211ENST00000591315 EDC4Q6P2E9 1401 aaKnown RBP16.07■□□□□ 0.16
VMP1-211ENST00000591315 SLIT3O75094 1523 aa16.07■□□□□ 0.16
VMP1-211ENST00000591315 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.06■□□□□ 0.16
VMP1-211ENST00000591315 NWD2Q9ULI1 1742 aa16.06■□□□□ 0.16
VMP1-211ENST00000591315 RGS12O14924 1447 aa16.06■□□□□ 0.16
VMP1-211ENST00000591315 ANKRD36BQ8N2N9 1353 aa16.06■□□□□ 0.16
VMP1-211ENST00000591315 NINLQ9Y2I6 1382 aa16.06■□□□□ 0.16
VMP1-211ENST00000591315 CDCA8Q53HL2 280 aa16.06■□□□□ 0.16
VMP1-211ENST00000591315 GJD4Q96KN9 370 aaPredicted RBP16.06■□□□□ 0.16
VMP1-211ENST00000591315 CARD14Q9BXL6 1004 aa16.06■□□□□ 0.16
VMP1-211ENST00000591315 GLI3P10071 1580 aa16.05■□□□□ 0.16
VMP1-211ENST00000591315 CAMTA1Q9Y6Y1 1673 aa16.05■□□□□ 0.16
VMP1-211ENST00000591315 CPDO75976 1380 aa16.04■□□□□ 0.16
VMP1-211ENST00000591315 USP31Q70CQ4 1352 aa16.04■□□□□ 0.16
VMP1-211ENST00000591315 FBLN1P23142 703 aa16.04■□□□□ 0.16
VMP1-211ENST00000591315 VPS72Q15906 364 aa16.04■□□□□ 0.16
VMP1-211ENST00000591315 STRN4Q9NRL3 753 aa16.04■□□□□ 0.16
VMP1-211ENST00000591315 CCDC9Q9Y3X0 531 aaKnown RBP16.04■□□□□ 0.16
VMP1-211ENST00000591315 NFAT5O94916 1531 aa16.03■□□□□ 0.16
VMP1-211ENST00000591315 AXIN2Q9Y2T1 843 aa16.02■□□□□ 0.16
VMP1-211ENST00000591315 LMO7Q8WWI1 1683 aa16.02■□□□□ 0.15
VMP1-211ENST00000591315 COL18A1P39060 1754 aa16.01■□□□□ 0.15
VMP1-211ENST00000591315 ARHGEF25Q86VW2 580 aa16.01■□□□□ 0.15
VMP1-211ENST00000591315 GGNBP2Q9H3C7 697 aa16.01■□□□□ 0.15
VMP1-211ENST00000591315 OVOS2A0A0J9YW53 1432 aa16.01■□□□□ 0.15
VMP1-211ENST00000591315 OVOS2Q6IE36 1432 aa16.01■□□□□ 0.15
VMP1-211ENST00000591315 RGPD5Q99666 1765 aa16■□□□□ 0.15
VMP1-211ENST00000591315 USP54Q70EL1 1684 aa16■□□□□ 0.15
VMP1-211ENST00000591315 CDK12Q9NYV4 1490 aaPredicted RBP16■□□□□ 0.15
VMP1-211ENST00000591315 FYB1O15117 783 aa16■□□□□ 0.15
VMP1-211ENST00000591315 MSH5O43196 834 aa16■□□□□ 0.15
VMP1-211ENST00000591315 LARP1Q6PKG0 1096 aaKnown RBP16■□□□□ 0.15
VMP1-211ENST00000591315 KIF7Q2M1P5 1343 aa15.99■□□□□ 0.15
VMP1-211ENST00000591315 SPATA31A5Q5VU36 1347 aa15.99■□□□□ 0.15
VMP1-211ENST00000591315 SPATA31A7Q8IWB4 1347 aa15.99■□□□□ 0.15
VMP1-211ENST00000591315 NSD3Q9BZ95 1437 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms