RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-212ENST00000591107 RNF39Q9H2S5 420 aa19.48■□□□□ 0.71
NPC1-212ENST00000591107 ALS2Q96Q42 1657 aa19.48■□□□□ 0.71
NPC1-212ENST00000591107 SRCAPQ6ZRS2 3230 aa19.47■□□□□ 0.71
NPC1-212ENST00000591107 DCAF11Q8TEB1 546 aa19.47■□□□□ 0.71
NPC1-212ENST00000591107 CRYBG1Q9Y4K1 1723 aa19.46■□□□□ 0.71
NPC1-212ENST00000591107 PSME1Q06323 249 aa19.46■□□□□ 0.71
NPC1-212ENST00000591107 CCDC9Q9Y3X0 531 aaKnown RBP19.45■□□□□ 0.7
NPC1-212ENST00000591107 ARHGEF10O15013 1369 aa19.44■□□□□ 0.7
NPC1-212ENST00000591107 SEPT12Q8IYM1 358 aa19.42■□□□□ 0.7
NPC1-212ENST00000591107 ATP7BP35670 1465 aa19.41■□□□□ 0.7
NPC1-212ENST00000591107 FAM83GA6ND36 823 aa19.41■□□□□ 0.7
NPC1-212ENST00000591107 VPS72Q15906 364 aa19.41■□□□□ 0.7
NPC1-212ENST00000591107 DEFB132Q7Z7B7 95 aa19.41■□□□□ 0.7
NPC1-212ENST00000591107 ACIN1Q9UKV3 1341 aaKnown RBP19.41■□□□□ 0.7
NPC1-212ENST00000591107 A0A0G2JS52 829 aa19.4■□□□□ 0.7
NPC1-212ENST00000591107 MYT1Q01538 1121 aa19.4■□□□□ 0.7
NPC1-212ENST00000591107 BLMP54132 1417 aaPredicted RBP19.4■□□□□ 0.7
NPC1-212ENST00000591107 ITSN1Q15811 1721 aa19.39■□□□□ 0.7
NPC1-212ENST00000591107 COL14A1Q05707 1796 aaKnown RBP19.39■□□□□ 0.7
NPC1-212ENST00000591107 WASLO00401 505 aaPredicted RBP19.39■□□□□ 0.69
NPC1-212ENST00000591107 GPRASP1Q5JY77 1395 aa19.38■□□□□ 0.69
NPC1-212ENST00000591107 TOPAZ1Q8N9V7 1692 aa19.38■□□□□ 0.69
NPC1-212ENST00000591107 PHRF1Q9P1Y6 1649 aaKnown RBP19.38■□□□□ 0.69
NPC1-212ENST00000591107 BTG4Q9NY30 223 aa19.37■□□□□ 0.69
NPC1-212ENST00000591107 ZRANB1Q9UGI0 708 aa19.37■□□□□ 0.69
NPC1-212ENST00000591107 EIF3AQ14152 1382 aaKnown RBP19.36■□□□□ 0.69
NPC1-212ENST00000591107 PAK3O75914 559 aaPredicted RBP19.36■□□□□ 0.69
NPC1-212ENST00000591107 FAM98CQ17RN3 349 aaKnown RBP19.35■□□□□ 0.69
NPC1-212ENST00000591107 NGDNQ8NEJ9 315 aaKnown RBP19.35■□□□□ 0.69
NPC1-212ENST00000591107 FAM182BQ5T319 152 aa19.34■□□□□ 0.69
NPC1-212ENST00000591107 NUTM2GQ5VZR2 741 aa19.33■□□□□ 0.68
NPC1-212ENST00000591107 KRT27Q7Z3Y8 459 aa19.33■□□□□ 0.68
NPC1-212ENST00000591107 CCDC125Q86Z20 511 aa19.32■□□□□ 0.68
NPC1-212ENST00000591107 THSD7AQ9UPZ6 1657 aa19.32■□□□□ 0.68
NPC1-212ENST00000591107 NUDT16Q96DE0 195 aaKnown RBP19.31■□□□□ 0.68
NPC1-212ENST00000591107 CHRNA2Q15822 529 aa19.3■□□□□ 0.68
NPC1-212ENST00000591107 NRKQ7Z2Y5 1582 aa19.3■□□□□ 0.68
NPC1-212ENST00000591107 KIAA1210Q9ULL0 1709 aa19.3■□□□□ 0.68
NPC1-212ENST00000591107 KIAA0232Q92628 1395 aa19.3■□□□□ 0.68
NPC1-212ENST00000591107 PRDM11Q9NQV5 511 aa19.29■□□□□ 0.68
NPC1-212ENST00000591107 ONECUT3O60422 494 aaPredicted RBP19.28■□□□□ 0.68
NPC1-212ENST00000591107 SF3B2Q13435 895 aaKnown RBP19.28■□□□□ 0.68
NPC1-212ENST00000591107 NBPF1Q3BBV0 1214 aa19.28■□□□□ 0.68
NPC1-212ENST00000591107 CDK19Q9BWU1 502 aa19.28■□□□□ 0.68
NPC1-212ENST00000591107 TNS1Q9HBL0 1735 aaKnown RBP19.28■□□□□ 0.68
NPC1-212ENST00000591107 SPATA31A5Q5VU36 1347 aa19.26■□□□□ 0.67
NPC1-212ENST00000591107 SPATA31A7Q8IWB4 1347 aa19.26■□□□□ 0.67
NPC1-212ENST00000591107 RGPD1P0DJD0 1748 aa19.26■□□□□ 0.67
NPC1-212ENST00000591107 TRIM26Q12899 539 aaPredicted RBP19.26■□□□□ 0.67
NPC1-212ENST00000591107 STRN4Q9NRL3 753 aa19.26■□□□□ 0.67
NPC1-212ENST00000591107 QRICH2Q9H0J4 1663 aa19.26■□□□□ 0.67
NPC1-212ENST00000591107 PSDA5PKW4 1024 aaPredicted RBP19.25■□□□□ 0.67
NPC1-212ENST00000591107 ZC3H6P61129 1189 aaKnown RBP19.25■□□□□ 0.67
NPC1-212ENST00000591107 ACEP12821 1306 aa19.25■□□□□ 0.67
NPC1-212ENST00000591107 POLR3AO14802 1390 aaPredicted RBP19.23■□□□□ 0.67
NPC1-212ENST00000591107 USP35Q9P2H5 1018 aa19.22■□□□□ 0.67
NPC1-212ENST00000591107 HRCP23327 699 aa19.21■□□□□ 0.67
NPC1-212ENST00000591107 PPIP5K1Q6PFW1 1433 aa19.21■□□□□ 0.67
NPC1-212ENST00000591107 LMO7Q8WWI1 1683 aa19.2■□□□□ 0.66
NPC1-212ENST00000591107 EN1Q05925 392 aaPredicted RBP19.2■□□□□ 0.66
NPC1-212ENST00000591107 STAC3Q96MF2 364 aa19.2■□□□□ 0.66
NPC1-212ENST00000591107 CABP2Q9NPB3 220 aa19.2■□□□□ 0.66
NPC1-212ENST00000591107 LRP5O75197 1615 aa19.2■□□□□ 0.66
NPC1-212ENST00000591107 CAMTA1Q9Y6Y1 1673 aa19.2■□□□□ 0.66
NPC1-212ENST00000591107 SPATA31A1Q5TZJ5 1347 aa19.2■□□□□ 0.66
NPC1-212ENST00000591107 SSH2Q76I76 1423 aa19.19■□□□□ 0.66
NPC1-212ENST00000591107 BAG6P46379 1132 aa19.19■□□□□ 0.66
NPC1-212ENST00000591107 NBPF8Q3BBV2 869 aa19.19■□□□□ 0.66
NPC1-212ENST00000591107 SRPK2P78362 688 aaKnown RBP19.18■□□□□ 0.66
NPC1-212ENST00000591107 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
NPC1-212ENST00000591107 CCDC61Q9Y6R9 512 aa19.17■□□□□ 0.66
NPC1-212ENST00000591107 CENPJQ9HC77 1338 aaPredicted RBP19.17■□□□□ 0.66
NPC1-212ENST00000591107 ZBTB7CA1YPR0 619 aa19.16■□□□□ 0.66
NPC1-212ENST00000591107 ABTB2Q8N961 1025 aa19.16■□□□□ 0.66
NPC1-212ENST00000591107 TRPM1Q7Z4N2 1603 aa19.15■□□□□ 0.66
NPC1-212ENST00000591107 PLEKHG3A1L390 1219 aa19.15■□□□□ 0.66
NPC1-212ENST00000591107 LARP1Q6PKG0 1096 aaKnown RBP19.15■□□□□ 0.66
NPC1-212ENST00000591107 USP19O94966 1318 aa19.15■□□□□ 0.66
NPC1-212ENST00000591107 PCGF6Q9BYE7 350 aa19.14■□□□□ 0.65
NPC1-212ENST00000591107 PIK3C2AO00443 1686 aa19.14■□□□□ 0.65
NPC1-212ENST00000591107 TRIM37O94972 964 aa19.13■□□□□ 0.65
NPC1-212ENST00000591107 EZH2Q15910 746 aaKnown RBP19.13■□□□□ 0.65
NPC1-212ENST00000591107 COL5A2P05997 1499 aaPredicted RBP19.12■□□□□ 0.65
NPC1-212ENST00000591107 SIN3AQ96ST3 1273 aa19.12■□□□□ 0.65
NPC1-212ENST00000591107 DISP2A7MBM2 1401 aa19.11■□□□□ 0.65
NPC1-212ENST00000591107 R3HDM1Q15032 1099 aaKnown RBP19.11■□□□□ 0.65
NPC1-212ENST00000591107 L3MBTL2Q969R5 705 aa19.11■□□□□ 0.65
NPC1-212ENST00000591107 USP6P35125 1406 aa19.1■□□□□ 0.65
NPC1-212ENST00000591107 CPDO75976 1380 aa19.1■□□□□ 0.65
NPC1-212ENST00000591107 EVA1CP58658 441 aa19.1■□□□□ 0.65
NPC1-212ENST00000591107 FKBP8Q14318 412 aa19.1■□□□□ 0.65
NPC1-212ENST00000591107 NUP188Q5SRE5 1749 aa19.1■□□□□ 0.65
NPC1-212ENST00000591107 RREB1Q92766 1687 aa19.1■□□□□ 0.65
NPC1-212ENST00000591107 SLIT3O75094 1523 aa19.1■□□□□ 0.65
NPC1-212ENST00000591107 CABP1Q9NZU7 370 aa19.09■□□□□ 0.65
NPC1-212ENST00000591107 LRRC37A3O60309 1634 aa19.09■□□□□ 0.65
NPC1-212ENST00000591107 PARP4Q9UKK3 1724 aaKnown RBP19.08■□□□□ 0.64
NPC1-212ENST00000591107 WNK3Q9BYP7 1800 aa19.07■□□□□ 0.64
NPC1-212ENST00000591107 GCP02774 474 aa19.07■□□□□ 0.64
NPC1-212ENST00000591107 C1QBPQ07021 282 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms