RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 ANKLE2Q86XL3 938 aa34.26■■■■□ 3.08
RUNDC3A-206ENST00000590941 E9PSI1 815 aa34.25■■■■□ 3.07
RUNDC3A-206ENST00000590941 SLFN5Q08AF3 891 aa34.25■■■■□ 3.07
RUNDC3A-206ENST00000590941 DUSP27Q5VZP5 1158 aa34.25■■■■□ 3.07
RUNDC3A-206ENST00000590941 PRR36Q9H6K5 1346 aa34.24■■■■□ 3.07
RUNDC3A-206ENST00000590941 PLEKHG3A1L390 1219 aa34.24■■■■□ 3.07
RUNDC3A-206ENST00000590941 AATKQ6ZMQ8 1374 aa34.23■■■■□ 3.07
RUNDC3A-206ENST00000590941 PNNQ9H307 717 aaKnown RBP34.23■■■■□ 3.07
RUNDC3A-206ENST00000590941 TRMT2AQ8IZ69 625 aaKnown RBP34.22■■■■□ 3.07
RUNDC3A-206ENST00000590941 NRKQ7Z2Y5 1582 aa34.22■■■■□ 3.07
RUNDC3A-206ENST00000590941 CCDC27Q2M243 656 aa34.22■■■■□ 3.07
RUNDC3A-206ENST00000590941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.22■■■■□ 3.07
RUNDC3A-206ENST00000590941 U2AF1L5P0DN76 240 aaPredicted RBP34.19■■■■□ 3.06
RUNDC3A-206ENST00000590941 U2AF1Q01081 240 aaKnown RBP eCLIP34.19■■■■□ 3.06
RUNDC3A-206ENST00000590941 ANKARQ7Z5J8 1434 aa34.18■■■■□ 3.06
RUNDC3A-206ENST00000590941 NKTRP30414 1462 aaKnown RBP34.18■■■■□ 3.06
RUNDC3A-206ENST00000590941 COG3Q96JB2 828 aa34.17■■■■□ 3.06
RUNDC3A-206ENST00000590941 DIAPH1O60610 1272 aaKnown RBP34.16■■■■□ 3.06
RUNDC3A-206ENST00000590941 CDK12Q9NYV4 1490 aaPredicted RBP34.16■■■■□ 3.06
RUNDC3A-206ENST00000590941 TCP11L2Q8N4U5 519 aa34.15■■■■□ 3.06
RUNDC3A-206ENST00000590941 WWC1Q8IX03 1113 aa34.15■■■■□ 3.06
RUNDC3A-206ENST00000590941 PHF23Q9BUL5 403 aaPredicted RBP34.15■■■■□ 3.06
RUNDC3A-206ENST00000590941 WDR63Q8IWG1 891 aa34.14■■■■□ 3.06
RUNDC3A-206ENST00000590941 CHD2O14647 1828 aaKnown RBP34.14■■■■□ 3.06
RUNDC3A-206ENST00000590941 USP6P35125 1406 aa34.13■■■■□ 3.05
RUNDC3A-206ENST00000590941 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.11■■■■□ 3.05
RUNDC3A-206ENST00000590941 MAP2P11137 1827 aaKnown RBP34.1■■■■□ 3.05
RUNDC3A-206ENST00000590941 ACEP12821 1306 aa34.1■■■■□ 3.05
RUNDC3A-206ENST00000590941 NME9Q86XW9 330 aa34.1■■■■□ 3.05
RUNDC3A-206ENST00000590941 POLKQ9UBT6 870 aa34.1■■■■□ 3.05
RUNDC3A-206ENST00000590941 U2SURPO15042 1029 aaKnown RBP34.09■■■■□ 3.05
RUNDC3A-206ENST00000590941 MAPK8IP3Q9UPT6 1336 aa34.08■■■■□ 3.05
RUNDC3A-206ENST00000590941 FMN2Q9NZ56 1722 aa34.08■■■■□ 3.05
RUNDC3A-206ENST00000590941 TTC21BQ7Z4L5 1316 aa34.07■■■■□ 3.05
RUNDC3A-206ENST00000590941 TTC21AQ8NDW8 1320 aa34.07■■■■□ 3.05
RUNDC3A-206ENST00000590941 NCKAP5LQ9HCH0 1330 aa34.07■■■■□ 3.05
RUNDC3A-206ENST00000590941 KCNA6P17658 529 aa34.06■■■■□ 3.04
RUNDC3A-206ENST00000590941 OVOS2A0A0J9YW53 1432 aa34.04■■■■□ 3.04
RUNDC3A-206ENST00000590941 NPHP4O75161 1426 aaPredicted RBP34.04■■■■□ 3.04
RUNDC3A-206ENST00000590941 OVOS2Q6IE36 1432 aa34.04■■■■□ 3.04
RUNDC3A-206ENST00000590941 FCHSD2O94868 740 aa34.03■■■■□ 3.04
RUNDC3A-206ENST00000590941 SSH2Q76I76 1423 aa34.03■■■■□ 3.04
RUNDC3A-206ENST00000590941 NALCNQ8IZF0 1738 aa34.03■■■■□ 3.04
RUNDC3A-206ENST00000590941 PLEKHF1Q96S99 279 aa34.03■■■■□ 3.04
RUNDC3A-206ENST00000590941 CCDC136Q96JN2 1154 aa34.03■■■■□ 3.04
RUNDC3A-206ENST00000590941 B4GALNT3Q6L9W6 998 aa34.02■■■■□ 3.04
RUNDC3A-206ENST00000590941 NEFMP07197 916 aa34.01■■■■□ 3.04
RUNDC3A-206ENST00000590941 MYH16Q9H6N6 1097 aa33.98■■■■□ 3.03
RUNDC3A-206ENST00000590941 SPINK5Q9NQ38 1064 aaPredicted RBP33.97■■■■□ 3.03
RUNDC3A-206ENST00000590941 USP31Q70CQ4 1352 aa33.96■■■■□ 3.03
RUNDC3A-206ENST00000590941 LRRC7Q96NW7 1537 aa33.96■■■■□ 3.03
RUNDC3A-206ENST00000590941 NEUROD2Q15784 382 aa33.96■■■■□ 3.03
RUNDC3A-206ENST00000590941 TSHZ2Q9NRE2 1034 aa33.95■■■■□ 3.03
RUNDC3A-206ENST00000590941 RRP7AQ9Y3A4 280 aaKnown RBP33.95■■■■□ 3.03
RUNDC3A-206ENST00000590941 TMPOP42166 694 aaKnown RBP33.94■■■■□ 3.02
RUNDC3A-206ENST00000590941 NWD1Q149M9 1564 aa33.94■■■■□ 3.02
RUNDC3A-206ENST00000590941 IL16Q14005 1332 aa33.94■■■■□ 3.02
RUNDC3A-206ENST00000590941 PPM1GO15355 546 aaPredicted RBP33.93■■■■□ 3.02
RUNDC3A-206ENST00000590941 NGDNQ8NEJ9 315 aaKnown RBP33.93■■■■□ 3.02
RUNDC3A-206ENST00000590941 RGPD8O14715 1765 aaPredicted RBP33.93■■■■□ 3.02
RUNDC3A-206ENST00000590941 EMILIN1Q9Y6C2 1016 aa33.93■■■■□ 3.02
RUNDC3A-206ENST00000590941 NUTM2FA1L443 756 aa33.92■■■■□ 3.02
RUNDC3A-206ENST00000590941 ADGRL3Q9HAR2 1447 aa33.92■■■■□ 3.02
RUNDC3A-206ENST00000590941 EXOC6Q8TAG9 804 aa33.91■■■■□ 3.02
RUNDC3A-206ENST00000590941 ZRANB1Q9UGI0 708 aa33.91■■■■□ 3.02
RUNDC3A-206ENST00000590941 IL13P35225 146 aa33.9■■■■□ 3.02
RUNDC3A-206ENST00000590941 DMRT2Q9Y5R5 561 aa33.9■■■■□ 3.02
RUNDC3A-206ENST00000590941 USP54Q70EL1 1684 aa33.9■■■■□ 3.02
RUNDC3A-206ENST00000590941 CT47B1P0C2W7 299 aaPredicted RBP33.9■■■■□ 3.02
RUNDC3A-206ENST00000590941 RSPH6AQ9H0K4 717 aa33.9■■■■□ 3.02
RUNDC3A-206ENST00000590941 PMFBP1Q8TBY8 1022 aa33.84■■■■□ 3.01
RUNDC3A-206ENST00000590941 PLIN1O60240 522 aa33.84■■■■□ 3.01
RUNDC3A-206ENST00000590941 PRKAR2BP31323 418 aa33.83■■■■□ 3.01
RUNDC3A-206ENST00000590941 PIK3C2AO00443 1686 aa33.81■■■■□ 3
RUNDC3A-206ENST00000590941 RIPK4P57078 832 aa33.81■■■■□ 3
RUNDC3A-206ENST00000590941 RRS1Q15050 365 aaKnown RBP33.81■■■■□ 3
RUNDC3A-206ENST00000590941 FBLN1P23142 703 aa33.8■■■■□ 3
RUNDC3A-206ENST00000590941 CALD1Q05682 793 aaKnown RBP33.8■■■■□ 3
RUNDC3A-206ENST00000590941 CRBNQ96SW2 442 aa33.8■■■■□ 3
RUNDC3A-206ENST00000590941 TRIM35Q9UPQ4 493 aa33.8■■■■□ 3
RUNDC3A-206ENST00000590941 KIF24Q5T7B8 1368 aa33.8■■■■□ 3
RUNDC3A-206ENST00000590941 LMOD3Q0VAK6 560 aa33.77■■■■□ 3
RUNDC3A-206ENST00000590941 NFE2L2Q16236 605 aa33.77■■■■□ 3
RUNDC3A-206ENST00000590941 PDE3AQ14432 1141 aa33.77■■■■□ 3
RUNDC3A-206ENST00000590941 SBNO1A3KN83 1393 aa33.75■■■□□ 2.99
RUNDC3A-206ENST00000590941 PHF8Q9UPP1 1060 aa33.75■■■□□ 2.99
RUNDC3A-206ENST00000590941 PEAK1Q9H792 1746 aa33.73■■■□□ 2.99
RUNDC3A-206ENST00000590941 FLT4P35916 1363 aa33.73■■■□□ 2.99
RUNDC3A-206ENST00000590941 RGPD1P0DJD0 1748 aa33.72■■■□□ 2.99
RUNDC3A-206ENST00000590941 FANCIQ9NVI1 1328 aa33.72■■■□□ 2.99
RUNDC3A-206ENST00000590941 RARSP54136 660 aaKnown RBP33.71■■■□□ 2.99
RUNDC3A-206ENST00000590941 HMOX1P09601 288 aa33.71■■■□□ 2.99
RUNDC3A-206ENST00000590941 BCAR3O75815 825 aa33.7■■■□□ 2.99
RUNDC3A-206ENST00000590941 EIF4A2Q14240 407 aaKnown RBP33.7■■■□□ 2.99
RUNDC3A-206ENST00000590941 CANXP27824 592 aaKnown RBP33.68■■■□□ 2.98
RUNDC3A-206ENST00000590941 ARHGEF10O15013 1369 aa33.68■■■□□ 2.98
RUNDC3A-206ENST00000590941 AAMPQ13685 434 aa33.68■■■□□ 2.98
RUNDC3A-206ENST00000590941 C20orf194Q5TEA3 1177 aa33.68■■■□□ 2.98
RUNDC3A-206ENST00000590941 MARF1Q9Y4F3 1742 aaKnown RBP33.66■■■□□ 2.98
RUNDC3A-206ENST00000590941 MAP3K19Q56UN5 1328 aa33.66■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms