RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-229	ENST00000590704	SOCS7	O14512	581 aa		29.4	■■■□□ 2.3
CIRBP-229	ENST00000590704	MON2	Q7Z3U7	1717 aa		29.4	■■■□□ 2.3
CIRBP-229	ENST00000590704	BRD4	O60885	1362 aa	Predicted RBP	29.39	■■■□□ 2.3
CIRBP-229	ENST00000590704	NRK	Q7Z2Y5	1582 aa		29.39	■■■□□ 2.3
CIRBP-229	ENST00000590704	TTC21B	Q7Z4L5	1316 aa		29.39	■■■□□ 2.29
CIRBP-229	ENST00000590704	CABLES1	Q8TDN4	633 aa		29.38	■■■□□ 2.29
CIRBP-229	ENST00000590704	MED1	Q15648	1581 aa	Predicted RBP	29.38	■■■□□ 2.29
CIRBP-229	ENST00000590704	PAK3	O75914	559 aa	Predicted RBP	29.37	■■■□□ 2.29
CIRBP-229	ENST00000590704	ZEB1	P37275	1124 aa	Predicted RBP	29.37	■■■□□ 2.29
CIRBP-229	ENST00000590704	KIF7	Q2M1P5	1343 aa		29.37	■■■□□ 2.29
CIRBP-229	ENST00000590704	KTN1	Q86UP2	1357 aa	Known RBP	29.37	■■■□□ 2.29
CIRBP-229	ENST00000590704	ARHGEF10	O15013	1369 aa		29.36	■■■□□ 2.29
CIRBP-229	ENST00000590704	CARD14	Q9BXL6	1004 aa		29.36	■■■□□ 2.29
CIRBP-229	ENST00000590704	CRYBG1	Q9Y4K1	1723 aa		29.35	■■■□□ 2.29
CIRBP-229	ENST00000590704	ANKRD36B	Q8N2N9	1353 aa		29.34	■■■□□ 2.29
CIRBP-229	ENST00000590704	NUTM2B	A6NNL0	878 aa	Predicted RBP	29.34	■■■□□ 2.29
CIRBP-229	ENST00000590704	NUTM2E	B1AL46	878 aa	Predicted RBP	29.34	■■■□□ 2.29
CIRBP-229	ENST00000590704	NUTM2A	Q8IVF1	878 aa	Predicted RBP	29.34	■■■□□ 2.29
CIRBP-229	ENST00000590704	NUTM2G	Q5VZR2	741 aa		29.33	■■■□□ 2.29
CIRBP-229	ENST00000590704	LMOD2	Q6P5Q4	547 aa		29.33	■■■□□ 2.29
CIRBP-229	ENST00000590704	TERF2IP	Q9NYB0	399 aa		29.32	■■■□□ 2.28
CIRBP-229	ENST00000590704	WASHC2A	Q641Q2	1341 aa		29.32	■■■□□ 2.28
CIRBP-229	ENST00000590704	PIK3C2A	O00443	1686 aa		29.32	■■■□□ 2.28
CIRBP-229	ENST00000590704	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	29.31	■■■□□ 2.28
CIRBP-229	ENST00000590704	ABTB2	Q8N961	1025 aa		29.31	■■■□□ 2.28
CIRBP-229	ENST00000590704	RGS17	Q9UGC6	210 aa	Predicted RBP	29.31	■■■□□ 2.28
CIRBP-229	ENST00000590704	ZRANB1	Q9UGI0	708 aa		29.31	■■■□□ 2.28
CIRBP-229	ENST00000590704	ABCA3	Q99758	1704 aa		29.31	■■■□□ 2.28
CIRBP-229	ENST00000590704	MARF1	Q9Y4F3	1742 aa	Known RBP	29.3	■■■□□ 2.28
CIRBP-229	ENST00000590704	EDC4	Q6P2E9	1401 aa	Known RBP	29.3	■■■□□ 2.28
CIRBP-229	ENST00000590704	USP19	O94966	1318 aa		29.29	■■■□□ 2.28
CIRBP-229	ENST00000590704	TTC21A	Q8NDW8	1320 aa		29.29	■■■□□ 2.28
CIRBP-229	ENST00000590704	CCDC7	Q96M83	1385 aa		29.27	■■■□□ 2.28
CIRBP-229	ENST00000590704	NME9	Q86XW9	330 aa		29.27	■■■□□ 2.28
CIRBP-229	ENST00000590704	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	29.26	■■■□□ 2.27
CIRBP-229	ENST00000590704	POLR3GL	Q9BT43	218 aa		29.26	■■■□□ 2.27
CIRBP-229	ENST00000590704	PLEKHG5	O94827	1062 aa		29.25	■■■□□ 2.27
CIRBP-229	ENST00000590704	ADAMTS2	O95450	1211 aa		29.25	■■■□□ 2.27
CIRBP-229	ENST00000590704	USP31	Q70CQ4	1352 aa		29.25	■■■□□ 2.27
CIRBP-229	ENST00000590704	NLRP6	P59044	892 aa		29.23	■■■□□ 2.27
CIRBP-229	ENST00000590704	NLRP13	Q86W25	1043 aa		29.23	■■■□□ 2.27
CIRBP-229	ENST00000590704	PHRF1	Q9P1Y6	1649 aa	Known RBP	29.22	■■■□□ 2.27
CIRBP-229	ENST00000590704	PANK3	Q9H999	370 aa		29.22	■■■□□ 2.27
CIRBP-229	ENST00000590704	FYB1	O15117	783 aa		29.21	■■■□□ 2.27
CIRBP-229	ENST00000590704	SLIT3	O75094	1523 aa		29.2	■■■□□ 2.27
CIRBP-229	ENST00000590704	USP54	Q70EL1	1684 aa		29.2	■■■□□ 2.27
CIRBP-229	ENST00000590704	FAM83G	A6ND36	823 aa		29.19	■■■□□ 2.26
CIRBP-229	ENST00000590704	GC	P02774	474 aa		29.19	■■■□□ 2.26
CIRBP-229	ENST00000590704	FNBP4	Q8N3X1	1017 aa	Predicted RBP	29.18	■■■□□ 2.26
CIRBP-229	ENST00000590704	OVOS2	A0A0J9YW53	1432 aa		29.18	■■■□□ 2.26
CIRBP-229	ENST00000590704	OVOS2	Q6IE36	1432 aa		29.18	■■■□□ 2.26
CIRBP-229	ENST00000590704	PHF23	Q9BUL5	403 aa	Predicted RBP	29.17	■■■□□ 2.26
CIRBP-229	ENST00000590704	NSD3	Q9BZ95	1437 aa		29.17	■■■□□ 2.26
CIRBP-229	ENST00000590704	PER1	O15534	1290 aa	Predicted RBP	29.16	■■■□□ 2.26
CIRBP-229	ENST00000590704	C8orf37	Q96NL8	207 aa		29.16	■■■□□ 2.26
CIRBP-229	ENST00000590704	SLIT2	O94813	1529 aa		29.13	■■■□□ 2.25
CIRBP-229	ENST00000590704	MEX3C	Q5U5Q3	659 aa	Known RBP	29.13	■■■□□ 2.25
CIRBP-229	ENST00000590704	AFF2	P51816	1311 aa		29.13	■■■□□ 2.25
CIRBP-229	ENST00000590704	BCL9L	Q86UU0	1499 aa		29.13	■■■□□ 2.25
CIRBP-229	ENST00000590704	ZC3H6	P61129	1189 aa	Known RBP	29.12	■■■□□ 2.25
CIRBP-229	ENST00000590704	KIAA0232	Q92628	1395 aa		29.12	■■■□□ 2.25
CIRBP-229	ENST00000590704	POTEA	Q6S8J7	498 aa		29.11	■■■□□ 2.25
CIRBP-229	ENST00000590704	GGNBP2	Q9H3C7	697 aa		29.11	■■■□□ 2.25
CIRBP-229	ENST00000590704	CPD	O75976	1380 aa		29.11	■■■□□ 2.25
CIRBP-229	ENST00000590704	NFAT5	O94916	1531 aa		29.11	■■■□□ 2.25
CIRBP-229	ENST00000590704	NGLY1	Q96IV0	654 aa		29.1	■■■□□ 2.25
CIRBP-229	ENST00000590704	FBLN1	P23142	703 aa		29.1	■■■□□ 2.25
CIRBP-229	ENST00000590704	ARHGEF25	Q86VW2	580 aa		29.09	■■■□□ 2.25
CIRBP-229	ENST00000590704	HAP1	P54257	671 aa	Predicted RBP	29.08	■■■□□ 2.25
CIRBP-229	ENST00000590704	CHRNA2	Q15822	529 aa		29.07	■■■□□ 2.24
CIRBP-229	ENST00000590704	COL18A1	P39060	1754 aa		29.06	■■■□□ 2.24
CIRBP-229	ENST00000590704	AMER1	Q5JTC6	1135 aa	Predicted RBP	29.04	■■■□□ 2.24
CIRBP-229	ENST00000590704	LMO7	Q8WWI1	1683 aa		29.04	■■■□□ 2.24
CIRBP-229	ENST00000590704	KIF20B	Q96Q89	1820 aa		29.04	■■■□□ 2.24
CIRBP-229	ENST00000590704	KCNH5	Q8NCM2	988 aa		29.04	■■■□□ 2.24
CIRBP-229	ENST00000590704	PRDM11	Q9NQV5	511 aa		29.04	■■■□□ 2.24
CIRBP-229	ENST00000590704	COL14A1	Q05707	1796 aa	Known RBP	29.03	■■■□□ 2.24
CIRBP-229	ENST00000590704	COG3	Q96JB2	828 aa		29.03	■■■□□ 2.24
CIRBP-229	ENST00000590704	USP21	Q9UK80	565 aa		29.03	■■■□□ 2.24
CIRBP-229	ENST00000590704	AXIN2	Q9Y2T1	843 aa		29.03	■■■□□ 2.24
CIRBP-229	ENST00000590704	PLCH1	Q4KWH8	1693 aa		29.02	■■■□□ 2.24
CIRBP-229	ENST00000590704	CAMTA1	Q9Y6Y1	1673 aa		29.02	■■■□□ 2.24
CIRBP-229	ENST00000590704	SOX12	O15370	315 aa		29.02	■■■□□ 2.24
CIRBP-229	ENST00000590704	CGNL1	Q0VF96	1302 aa		29.01	■■■□□ 2.24
CIRBP-229	ENST00000590704	BTG4	Q9NY30	223 aa		29	■■■□□ 2.23
CIRBP-229	ENST00000590704	NRAP	Q86VF7	1730 aa		28.99	■■■□□ 2.23
CIRBP-229	ENST00000590704	NWD2	Q9ULI1	1742 aa		28.99	■■■□□ 2.23
CIRBP-229	ENST00000590704	ZNF772	Q68DY9	489 aa	Predicted RBP	28.99	■■■□□ 2.23
CIRBP-229	ENST00000590704	UNC5CL	Q8IV45	518 aa		28.99	■■■□□ 2.23
CIRBP-229	ENST00000590704	AATK	Q6ZMQ8	1374 aa		28.99	■■■□□ 2.23
CIRBP-229	ENST00000590704	ATRN	O75882	1429 aa		28.98	■■■□□ 2.23
CIRBP-229	ENST00000590704	QTRT2	Q9H974	415 aa	Known RBP	28.97	■■■□□ 2.23
CIRBP-229	ENST00000590704	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	28.97	■■■□□ 2.23
CIRBP-229	ENST00000590704	KNSTRN	Q9Y448	316 aa		28.95	■■■□□ 2.22
CIRBP-229	ENST00000590704	MAP3K19	Q56UN5	1328 aa		28.94	■■■□□ 2.22
CIRBP-229	ENST00000590704	ANKRD26	Q9UPS8	1709 aa		28.92	■■■□□ 2.22
CIRBP-229	ENST00000590704	RGPD5	Q99666	1765 aa		28.92	■■■□□ 2.22
CIRBP-229	ENST00000590704	RRS1	Q15050	365 aa	Known RBP	28.91	■■■□□ 2.22
CIRBP-229	ENST00000590704	VPS72	Q15906	364 aa		28.91	■■■□□ 2.22
CIRBP-229	ENST00000590704	LTN1	O94822	1766 aa		28.91	■■■□□ 2.22

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