RNA–Protein interactions for RNA: ENST00000590422.1

CTIF-208, Transcript of cap binding complex dependent translation initiation factor, humanhuman

TSL 3

Gene CTIF, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTIF-208ENST00000590422 PHRF1Q9P1Y6 1649 aaKnown RBP17.69■□□□□ 0.42
CTIF-208ENST00000590422 CCDC125Q86Z20 511 aa17.69■□□□□ 0.42
CTIF-208ENST00000590422 ONECUT3O60422 494 aaPredicted RBP17.68■□□□□ 0.42
CTIF-208ENST00000590422 NGDNQ8NEJ9 315 aaKnown RBP17.68■□□□□ 0.42
CTIF-208ENST00000590422 BTG4Q9NY30 223 aa17.67■□□□□ 0.42
CTIF-208ENST00000590422 PAK3O75914 559 aaPredicted RBP17.66■□□□□ 0.42
CTIF-208ENST00000590422 DEFB132Q7Z7B7 95 aa17.66■□□□□ 0.42
CTIF-208ENST00000590422 NUDT16Q96DE0 195 aaKnown RBP17.66■□□□□ 0.42
CTIF-208ENST00000590422 ZRANB1Q9UGI0 708 aa17.65■□□□□ 0.42
CTIF-208ENST00000590422 THSD7AQ9UPZ6 1657 aa17.64■□□□□ 0.42
CTIF-208ENST00000590422 FAM98CQ17RN3 349 aaKnown RBP17.64■□□□□ 0.41
CTIF-208ENST00000590422 NBPF1Q3BBV0 1214 aa17.64■□□□□ 0.41
CTIF-208ENST00000590422 KRT27Q7Z3Y8 459 aa17.64■□□□□ 0.41
CTIF-208ENST00000590422 CDK19Q9BWU1 502 aa17.63■□□□□ 0.41
CTIF-208ENST00000590422 POLR3AO14802 1390 aaPredicted RBP17.63■□□□□ 0.41
CTIF-208ENST00000590422 A0A0G2JS52 829 aa17.62■□□□□ 0.41
CTIF-208ENST00000590422 MYT1Q01538 1121 aa17.62■□□□□ 0.41
CTIF-208ENST00000590422 KIAA0232Q92628 1395 aa17.62■□□□□ 0.41
CTIF-208ENST00000590422 NRKQ7Z2Y5 1582 aa17.62■□□□□ 0.41
CTIF-208ENST00000590422 PRDM11Q9NQV5 511 aa17.61■□□□□ 0.41
CTIF-208ENST00000590422 SPATA31A5Q5VU36 1347 aa17.61■□□□□ 0.41
CTIF-208ENST00000590422 SPATA31A7Q8IWB4 1347 aa17.61■□□□□ 0.41
CTIF-208ENST00000590422 QRICH2Q9H0J4 1663 aa17.61■□□□□ 0.41
CTIF-208ENST00000590422 NUTM2GQ5VZR2 741 aa17.6■□□□□ 0.41
CTIF-208ENST00000590422 ACEP12821 1306 aa17.6■□□□□ 0.41
CTIF-208ENST00000590422 CHRNA2Q15822 529 aa17.59■□□□□ 0.41
CTIF-208ENST00000590422 FAM182BQ5T319 152 aa17.58■□□□□ 0.4
CTIF-208ENST00000590422 RGPD1P0DJD0 1748 aa17.58■□□□□ 0.4
CTIF-208ENST00000590422 TNS1Q9HBL0 1735 aaKnown RBP17.58■□□□□ 0.4
CTIF-208ENST00000590422 SF3B2Q13435 895 aaKnown RBP17.57■□□□□ 0.4
CTIF-208ENST00000590422 NBPF8Q3BBV2 869 aa17.57■□□□□ 0.4
CTIF-208ENST00000590422 CCDC61Q9Y6R9 512 aa17.57■□□□□ 0.4
CTIF-208ENST00000590422 LMO7Q8WWI1 1683 aa17.57■□□□□ 0.4
CTIF-208ENST00000590422 PLEKHG3A1L390 1219 aa17.56■□□□□ 0.4
CTIF-208ENST00000590422 ZC3H6P61129 1189 aaKnown RBP17.56■□□□□ 0.4
CTIF-208ENST00000590422 PPIP5K1Q6PFW1 1433 aa17.55■□□□□ 0.4
CTIF-208ENST00000590422 SPATA31A1Q5TZJ5 1347 aa17.55■□□□□ 0.4
CTIF-208ENST00000590422 CAMTA1Q9Y6Y1 1673 aa17.55■□□□□ 0.4
CTIF-208ENST00000590422 TRPM1Q7Z4N2 1603 aa17.54■□□□□ 0.4
CTIF-208ENST00000590422 CENPJQ9HC77 1338 aaPredicted RBP17.54■□□□□ 0.4
CTIF-208ENST00000590422 STRN4Q9NRL3 753 aa17.54■□□□□ 0.4
CTIF-208ENST00000590422 USP19O94966 1318 aa17.53■□□□□ 0.4
CTIF-208ENST00000590422 CABP2Q9NPB3 220 aa17.53■□□□□ 0.4
CTIF-208ENST00000590422 SSH2Q76I76 1423 aa17.53■□□□□ 0.4
CTIF-208ENST00000590422 LRP5O75197 1615 aa17.52■□□□□ 0.4
CTIF-208ENST00000590422 SRPK2P78362 688 aaKnown RBP17.52■□□□□ 0.4
CTIF-208ENST00000590422 ABTB2Q8N961 1025 aa17.51■□□□□ 0.39
CTIF-208ENST00000590422 L3MBTL2Q969R5 705 aa17.51■□□□□ 0.39
CTIF-208ENST00000590422 CPDO75976 1380 aa17.51■□□□□ 0.39
CTIF-208ENST00000590422 DISP2A7MBM2 1401 aa17.5■□□□□ 0.39
CTIF-208ENST00000590422 BAG6P46379 1132 aa17.5■□□□□ 0.39
CTIF-208ENST00000590422 PIK3C2AO00443 1686 aa17.49■□□□□ 0.39
CTIF-208ENST00000590422 USP6P35125 1406 aa17.49■□□□□ 0.39
CTIF-208ENST00000590422 EN1Q05925 392 aaPredicted RBP17.49■□□□□ 0.39
CTIF-208ENST00000590422 USP35Q9P2H5 1018 aa17.49■□□□□ 0.39
CTIF-208ENST00000590422 PSDA5PKW4 1024 aaPredicted RBP17.48■□□□□ 0.39
CTIF-208ENST00000590422 LARP1Q6PKG0 1096 aaKnown RBP17.48■□□□□ 0.39
CTIF-208ENST00000590422 SIN3AQ96ST3 1273 aa17.48■□□□□ 0.39
CTIF-208ENST00000590422 SLIT3O75094 1523 aa17.47■□□□□ 0.39
CTIF-208ENST00000590422 COL5A2P05997 1499 aaPredicted RBP17.47■□□□□ 0.39
CTIF-208ENST00000590422 CABP1Q9NZU7 370 aa17.46■□□□□ 0.39
CTIF-208ENST00000590422 GCP02774 474 aa17.45■□□□□ 0.38
CTIF-208ENST00000590422 AKAP12Q02952 1782 aa17.45■□□□□ 0.38
CTIF-208ENST00000590422 PARP4Q9UKK3 1724 aaKnown RBP17.44■□□□□ 0.38
CTIF-208ENST00000590422 TRIM37O94972 964 aa17.44■□□□□ 0.38
CTIF-208ENST00000590422 EVA1CP58658 441 aa17.44■□□□□ 0.38
CTIF-208ENST00000590422 BARGINQ6ZT62 677 aa17.44■□□□□ 0.38
CTIF-208ENST00000590422 NLRP13Q86W25 1043 aa17.44■□□□□ 0.38
CTIF-208ENST00000590422 COL18A1P39060 1754 aa17.43■□□□□ 0.38
CTIF-208ENST00000590422 BRD4O60885 1362 aaPredicted RBP17.43■□□□□ 0.38
CTIF-208ENST00000590422 RREB1Q92766 1687 aa17.42■□□□□ 0.38
CTIF-208ENST00000590422 ROCK2O75116 1388 aaKnown RBP17.42■□□□□ 0.38
CTIF-208ENST00000590422 EZH2Q15910 746 aaKnown RBP17.42■□□□□ 0.38
CTIF-208ENST00000590422 FAM196AQ6ZSG2 479 aa17.42■□□□□ 0.38
CTIF-208ENST00000590422 TCP11L2Q8N4U5 519 aa17.42■□□□□ 0.38
CTIF-208ENST00000590422 LRRC37A3O60309 1634 aa17.42■□□□□ 0.38
CTIF-208ENST00000590422 NUP188Q5SRE5 1749 aa17.41■□□□□ 0.38
CTIF-208ENST00000590422 NEUROD1Q13562 356 aa17.41■□□□□ 0.38
CTIF-208ENST00000590422 WNK3Q9BYP7 1800 aa17.41■□□□□ 0.38
CTIF-208ENST00000590422 EVC2Q86UK5 1308 aa17.41■□□□□ 0.38
CTIF-208ENST00000590422 NLRP6P59044 892 aa17.4■□□□□ 0.38
CTIF-208ENST00000590422 R3HDM1Q15032 1099 aaKnown RBP17.4■□□□□ 0.38
CTIF-208ENST00000590422 CAMKK2Q96RR4 588 aa17.4■□□□□ 0.38
CTIF-208ENST00000590422 PEAK1Q9H792 1746 aa17.4■□□□□ 0.38
CTIF-208ENST00000590422 CRB1P82279 1406 aa17.39■□□□□ 0.38
CTIF-208ENST00000590422 RGPD5Q99666 1765 aa17.39■□□□□ 0.37
CTIF-208ENST00000590422 ZBTB7CA1YPR0 619 aa17.39■□□□□ 0.37
CTIF-208ENST00000590422 AATKQ6ZMQ8 1374 aa17.39■□□□□ 0.37
CTIF-208ENST00000590422 PDE3BQ13370 1112 aa17.38■□□□□ 0.37
CTIF-208ENST00000590422 MON2Q7Z3U7 1717 aa17.38■□□□□ 0.37
CTIF-208ENST00000590422 CPSF1Q10570 1443 aaKnown RBP17.38■□□□□ 0.37
CTIF-208ENST00000590422 APBA3O96018 575 aa17.37■□□□□ 0.37
CTIF-208ENST00000590422 THRAP3Q9Y2W1 955 aaKnown RBP17.37■□□□□ 0.37
CTIF-208ENST00000590422 NFAT5O94916 1531 aa17.37■□□□□ 0.37
CTIF-208ENST00000590422 SBF2Q86WG5 1849 aa17.36■□□□□ 0.37
CTIF-208ENST00000590422 AXIN2Q9Y2T1 843 aa17.35■□□□□ 0.37
CTIF-208ENST00000590422 TTC21BQ7Z4L5 1316 aa17.35■□□□□ 0.37
CTIF-208ENST00000590422 PARD3Q8TEW0 1356 aa17.35■□□□□ 0.37
CTIF-208ENST00000590422 SOX12O15370 315 aa17.33■□□□□ 0.36
CTIF-208ENST00000590422 OVOS2A0A0G2JMS6 1433 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms