RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 SBNO2Q9Y2G9 1366 aa19.77■□□□□ 0.76
SCAMP4-212ENST00000590266 USP21Q9UK80 565 aa19.76■□□□□ 0.75
SCAMP4-212ENST00000590266 ATAD2Q6PL18 1390 aa19.75■□□□□ 0.75
SCAMP4-212ENST00000590266 TMC1Q8TDI8 760 aa19.75■□□□□ 0.75
SCAMP4-212ENST00000590266 TRPM3Q9HCF6 1732 aaPredicted RBP19.74■□□□□ 0.75
SCAMP4-212ENST00000590266 RBM6P78332 1123 aaKnown RBP19.74■□□□□ 0.75
SCAMP4-212ENST00000590266 ABTB2Q8N961 1025 aa19.73■□□□□ 0.75
SCAMP4-212ENST00000590266 TESK2Q96S53 571 aa19.72■□□□□ 0.75
SCAMP4-212ENST00000590266 CDK12Q9NYV4 1490 aaPredicted RBP19.71■□□□□ 0.75
SCAMP4-212ENST00000590266 USP6P35125 1406 aa19.7■□□□□ 0.74
SCAMP4-212ENST00000590266 FNBP4Q8N3X1 1017 aaPredicted RBP19.7■□□□□ 0.74
SCAMP4-212ENST00000590266 TRPC5Q9UL62 973 aaPredicted RBP19.69■□□□□ 0.74
SCAMP4-212ENST00000590266 ALS2Q96Q42 1657 aa19.68■□□□□ 0.74
SCAMP4-212ENST00000590266 TMF1P82094 1093 aa19.68■□□□□ 0.74
SCAMP4-212ENST00000590266 UPF1Q92900 1129 aaKnown RBP eCLIP19.68■□□□□ 0.74
SCAMP4-212ENST00000590266 ZNF692Q9BU19 519 aaPredicted RBP19.67■□□□□ 0.74
SCAMP4-212ENST00000590266 SLC12A5Q9H2X9 1139 aa19.67■□□□□ 0.74
SCAMP4-212ENST00000590266 KTN1Q86UP2 1357 aaKnown RBP19.67■□□□□ 0.74
SCAMP4-212ENST00000590266 SLC24A1O60721 1099 aa19.66■□□□□ 0.74
SCAMP4-212ENST00000590266 ZC3H6P61129 1189 aaKnown RBP19.66■□□□□ 0.74
SCAMP4-212ENST00000590266 FAM83GA6ND36 823 aa19.65■□□□□ 0.74
SCAMP4-212ENST00000590266 NLRP6P59044 892 aa19.65■□□□□ 0.74
SCAMP4-212ENST00000590266 HDGFL2Q7Z4V5 671 aaPredicted RBP19.65■□□□□ 0.74
SCAMP4-212ENST00000590266 NLRP13Q86W25 1043 aa19.65■□□□□ 0.74
SCAMP4-212ENST00000590266 PRDM11Q9NQV5 511 aa19.65■□□□□ 0.74
SCAMP4-212ENST00000590266 BCL9LQ86UU0 1499 aa19.65■□□□□ 0.74
SCAMP4-212ENST00000590266 ZBTB7CA1YPR0 619 aa19.64■□□□□ 0.73
SCAMP4-212ENST00000590266 UNC5CLQ8IV45 518 aa19.64■□□□□ 0.73
SCAMP4-212ENST00000590266 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.64■□□□□ 0.73
SCAMP4-212ENST00000590266 CCDC9Q9Y3X0 531 aaKnown RBP19.64■□□□□ 0.73
SCAMP4-212ENST00000590266 TTC21BQ7Z4L5 1316 aa19.64■□□□□ 0.73
SCAMP4-212ENST00000590266 BRD4O60885 1362 aaPredicted RBP19.64■□□□□ 0.73
SCAMP4-212ENST00000590266 RGS12O14924 1447 aa19.64■□□□□ 0.73
SCAMP4-212ENST00000590266 ABCA3Q99758 1704 aa19.63■□□□□ 0.73
SCAMP4-212ENST00000590266 CPSF1Q10570 1443 aaKnown RBP19.63■□□□□ 0.73
SCAMP4-212ENST00000590266 CHRNA2Q15822 529 aa19.63■□□□□ 0.73
SCAMP4-212ENST00000590266 SLIT2O94813 1529 aa19.62■□□□□ 0.73
SCAMP4-212ENST00000590266 KIAA0232Q92628 1395 aa19.62■□□□□ 0.73
SCAMP4-212ENST00000590266 EIF4G2P78344 907 aaKnown RBP eCLIP19.62■□□□□ 0.73
SCAMP4-212ENST00000590266 BTG4Q9NY30 223 aa19.62■□□□□ 0.73
SCAMP4-212ENST00000590266 TERF2IPQ9NYB0 399 aa19.62■□□□□ 0.73
SCAMP4-212ENST00000590266 ATRNO75882 1429 aa19.61■□□□□ 0.73
SCAMP4-212ENST00000590266 SOX12O15370 315 aa19.61■□□□□ 0.73
SCAMP4-212ENST00000590266 PUS7Q96PZ0 661 aaKnown RBP19.61■□□□□ 0.73
SCAMP4-212ENST00000590266 POLR3GLQ9BT43 218 aa19.61■□□□□ 0.73
SCAMP4-212ENST00000590266 SSH2Q76I76 1423 aa19.6■□□□□ 0.73
SCAMP4-212ENST00000590266 USP19O94966 1318 aa19.6■□□□□ 0.73
SCAMP4-212ENST00000590266 HSPA5P11021 654 aaKnown RBP19.6■□□□□ 0.73
SCAMP4-212ENST00000590266 CD163L1Q9NR16 1453 aa19.6■□□□□ 0.73
SCAMP4-212ENST00000590266 MARF1Q9Y4F3 1742 aaKnown RBP19.59■□□□□ 0.73
SCAMP4-212ENST00000590266 A0A1W2PP64 1363 aa19.59■□□□□ 0.73
SCAMP4-212ENST00000590266 TTC21AQ8NDW8 1320 aa19.59■□□□□ 0.73
SCAMP4-212ENST00000590266 GCP02774 474 aa19.59■□□□□ 0.73
SCAMP4-212ENST00000590266 CDCA8Q53HL2 280 aa19.59■□□□□ 0.73
SCAMP4-212ENST00000590266 GJD4Q96KN9 370 aaPredicted RBP19.58■□□□□ 0.72
SCAMP4-212ENST00000590266 PHRF1Q9P1Y6 1649 aaKnown RBP19.58■□□□□ 0.72
SCAMP4-212ENST00000590266 NME9Q86XW9 330 aa19.57■□□□□ 0.72
SCAMP4-212ENST00000590266 STRN4Q9NRL3 753 aa19.57■□□□□ 0.72
SCAMP4-212ENST00000590266 ZRANB1Q9UGI0 708 aa19.57■□□□□ 0.72
SCAMP4-212ENST00000590266 NINLQ9Y2I6 1382 aa19.57■□□□□ 0.72
SCAMP4-212ENST00000590266 NRKQ7Z2Y5 1582 aa19.56■□□□□ 0.72
SCAMP4-212ENST00000590266 CRYBG1Q9Y4K1 1723 aa19.56■□□□□ 0.72
SCAMP4-212ENST00000590266 PLCH1Q4KWH8 1693 aa19.56■□□□□ 0.72
SCAMP4-212ENST00000590266 VPS72Q15906 364 aa19.55■□□□□ 0.72
SCAMP4-212ENST00000590266 PIK3C2AO00443 1686 aa19.55■□□□□ 0.72
SCAMP4-212ENST00000590266 EDC4Q6P2E9 1401 aaKnown RBP19.54■□□□□ 0.72
SCAMP4-212ENST00000590266 A0A0G2JS52 829 aa19.54■□□□□ 0.72
SCAMP4-212ENST00000590266 MYT1Q01538 1121 aa19.54■□□□□ 0.72
SCAMP4-212ENST00000590266 AKAP12Q02952 1782 aa19.53■□□□□ 0.72
SCAMP4-212ENST00000590266 COL14A1Q05707 1796 aaKnown RBP19.53■□□□□ 0.72
SCAMP4-212ENST00000590266 EVA1CP58658 441 aa19.52■□□□□ 0.72
SCAMP4-212ENST00000590266 ANKRD36BQ8N2N9 1353 aa19.52■□□□□ 0.72
SCAMP4-212ENST00000590266 KCNH5Q8NCM2 988 aa19.51■□□□□ 0.71
SCAMP4-212ENST00000590266 CPDO75976 1380 aa19.51■□□□□ 0.71
SCAMP4-212ENST00000590266 SLIT3O75094 1523 aa19.51■□□□□ 0.71
SCAMP4-212ENST00000590266 MON2Q7Z3U7 1717 aa19.5■□□□□ 0.71
SCAMP4-212ENST00000590266 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.49■□□□□ 0.71
SCAMP4-212ENST00000590266 FAM98CQ17RN3 349 aaKnown RBP19.49■□□□□ 0.71
SCAMP4-212ENST00000590266 USP35Q9P2H5 1018 aa19.49■□□□□ 0.71
SCAMP4-212ENST00000590266 GLI3P10071 1580 aa19.49■□□□□ 0.71
SCAMP4-212ENST00000590266 NWD2Q9ULI1 1742 aa19.48■□□□□ 0.71
SCAMP4-212ENST00000590266 SEPT12Q8IYM1 358 aa19.47■□□□□ 0.71
SCAMP4-212ENST00000590266 USP31Q70CQ4 1352 aa19.46■□□□□ 0.71
SCAMP4-212ENST00000590266 NRAPQ86VF7 1730 aa19.46■□□□□ 0.71
SCAMP4-212ENST00000590266 LARP1Q6PKG0 1096 aaKnown RBP19.46■□□□□ 0.71
SCAMP4-212ENST00000590266 COG3Q96JB2 828 aa19.46■□□□□ 0.71
SCAMP4-212ENST00000590266 SPATA31A5Q5VU36 1347 aa19.46■□□□□ 0.71
SCAMP4-212ENST00000590266 SPATA31A7Q8IWB4 1347 aa19.46■□□□□ 0.71
SCAMP4-212ENST00000590266 ARHGEF25Q86VW2 580 aa19.45■□□□□ 0.7
SCAMP4-212ENST00000590266 CAMTA1Q9Y6Y1 1673 aa19.45■□□□□ 0.7
SCAMP4-212ENST00000590266 AATKQ6ZMQ8 1374 aa19.44■□□□□ 0.7
SCAMP4-212ENST00000590266 GGNBP2Q9H3C7 697 aa19.44■□□□□ 0.7
SCAMP4-212ENST00000590266 AXIN2Q9Y2T1 843 aa19.43■□□□□ 0.7
SCAMP4-212ENST00000590266 SPATA31A1Q5TZJ5 1347 aa19.43■□□□□ 0.7
SCAMP4-212ENST00000590266 OVOS2A0A0J9YW53 1432 aa19.42■□□□□ 0.7
SCAMP4-212ENST00000590266 OVOS2Q6IE36 1432 aa19.42■□□□□ 0.7
SCAMP4-212ENST00000590266 NSD3Q9BZ95 1437 aa19.42■□□□□ 0.7
SCAMP4-212ENST00000590266 C11orf95C9JLR9 678 aaPredicted RBP19.42■□□□□ 0.7
SCAMP4-212ENST00000590266 CSB-PGBD3P0DP91 1061 aa19.42■□□□□ 0.7
SCAMP4-212ENST00000590266 CCDC125Q86Z20 511 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms