RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 ITSN1Q15811 1721 aa15.28■□□□□ 0.04
RETREG3-209ENST00000590035 COL14A1Q05707 1796 aaKnown RBP15.27■□□□□ 0.04
RETREG3-209ENST00000590035 FAM83GA6ND36 823 aa15.27■□□□□ 0.04
RETREG3-209ENST00000590035 KCNA4P22459 653 aa15.26■□□□□ 0.03
RETREG3-209ENST00000590035 BLMP54132 1417 aaPredicted RBP15.26■□□□□ 0.03
RETREG3-209ENST00000590035 POLR3AO14802 1390 aaPredicted RBP15.24■□□□□ 0.03
RETREG3-209ENST00000590035 GPRASP1Q5JY77 1395 aa15.24■□□□□ 0.03
RETREG3-209ENST00000590035 SEPT12Q8IYM1 358 aa15.24■□□□□ 0.03
RETREG3-209ENST00000590035 THSD7AQ9UPZ6 1657 aa15.22■□□□□ 0.03
RETREG3-209ENST00000590035 PHRF1Q9P1Y6 1649 aaKnown RBP15.22■□□□□ 0.03
RETREG3-209ENST00000590035 NUDT16Q96DE0 195 aaKnown RBP15.22■□□□□ 0.03
RETREG3-209ENST00000590035 PLEKHG3A1L390 1219 aa15.2■□□□□ 0.02
RETREG3-209ENST00000590035 HAP1P54257 671 aaPredicted RBP15.2■□□□□ 0.02
RETREG3-209ENST00000590035 LMOD2Q6P5Q4 547 aa15.2■□□□□ 0.02
RETREG3-209ENST00000590035 NBPF1Q3BBV0 1214 aa15.19■□□□□ 0.02
RETREG3-209ENST00000590035 CDK19Q9BWU1 502 aa15.19■□□□□ 0.02
RETREG3-209ENST00000590035 BTG4Q9NY30 223 aa15.19■□□□□ 0.02
RETREG3-209ENST00000590035 SPATA31A5Q5VU36 1347 aa15.18■□□□□ 0.02
RETREG3-209ENST00000590035 SPATA31A7Q8IWB4 1347 aa15.18■□□□□ 0.02
RETREG3-209ENST00000590035 NGDNQ8NEJ9 315 aaKnown RBP15.18■□□□□ 0.02
RETREG3-209ENST00000590035 NRKQ7Z2Y5 1582 aa15.17■□□□□ 0.02
RETREG3-209ENST00000590035 KRT27Q7Z3Y8 459 aa15.17■□□□□ 0.02
RETREG3-209ENST00000590035 CCDC61Q9Y6R9 512 aa15.17■□□□□ 0.02
RETREG3-209ENST00000590035 LMO7Q8WWI1 1683 aa15.16■□□□□ 0.02
RETREG3-209ENST00000590035 ZRANB1Q9UGI0 708 aa15.16■□□□□ 0.02
RETREG3-209ENST00000590035 USP19O94966 1318 aa15.16■□□□□ 0.02
RETREG3-209ENST00000590035 ACEP12821 1306 aa15.16■□□□□ 0.02
RETREG3-209ENST00000590035 KIAA0232Q92628 1395 aa15.15■□□□□ 0.02
RETREG3-209ENST00000590035 PLEKHG5O94827 1062 aa15.15■□□□□ 0.02
RETREG3-209ENST00000590035 NBPF8Q3BBV2 869 aa15.15■□□□□ 0.02
RETREG3-209ENST00000590035 DEFB132Q7Z7B7 95 aa15.15■□□□□ 0.02
RETREG3-209ENST00000590035 FAM98CQ17RN3 349 aaKnown RBP15.14■□□□□ 0.01
RETREG3-209ENST00000590035 DISP2A7MBM2 1401 aa15.14■□□□□ 0.01
RETREG3-209ENST00000590035 CPDO75976 1380 aa15.13■□□□□ 0.01
RETREG3-209ENST00000590035 QRICH2Q9H0J4 1663 aa15.13■□□□□ 0.01
RETREG3-209ENST00000590035 TNS1Q9HBL0 1735 aaKnown RBP15.13■□□□□ 0.01
RETREG3-209ENST00000590035 TRPM1Q7Z4N2 1603 aa15.13■□□□□ 0.01
RETREG3-209ENST00000590035 SPATA31A1Q5TZJ5 1347 aa15.13■□□□□ 0.01
RETREG3-209ENST00000590035 SSH2Q76I76 1423 aa15.12■□□□□ 0.01
RETREG3-209ENST00000590035 PAK3O75914 559 aaPredicted RBP15.12■□□□□ 0.01
RETREG3-209ENST00000590035 PRDM11Q9NQV5 511 aa15.12■□□□□ 0.01
RETREG3-209ENST00000590035 CCDC9Q9Y3X0 531 aaKnown RBP15.12■□□□□ 0.01
RETREG3-209ENST00000590035 CAMTA1Q9Y6Y1 1673 aa15.12■□□□□ 0.01
RETREG3-209ENST00000590035 CENPJQ9HC77 1338 aaPredicted RBP15.12■□□□□ 0.01
RETREG3-209ENST00000590035 RGPD1P0DJD0 1748 aa15.12■□□□□ 0.01
RETREG3-209ENST00000590035 BRD4O60885 1362 aaPredicted RBP15.11■□□□□ 0.01
RETREG3-209ENST00000590035 PPIP5K1Q6PFW1 1433 aa15.1■□□□□ 0.01
RETREG3-209ENST00000590035 NPM3O75607 178 aaKnown RBP15.1■□□□□ 0.01
RETREG3-209ENST00000590035 L3MBTL2Q969R5 705 aa15.1■□□□□ 0.01
RETREG3-209ENST00000590035 LRP5O75197 1615 aa15.1■□□□□ 0.01
RETREG3-209ENST00000590035 SLIT3O75094 1523 aa15.09■□□□□ 0.01
RETREG3-209ENST00000590035 RNF216Q9NWF9 866 aaPredicted RBP15.09■□□□□ 0.01
RETREG3-209ENST00000590035 HOXD11P31277 338 aaPredicted RBP15.08■□□□□ 0
RETREG3-209ENST00000590035 CHRNA2Q15822 529 aa15.08■□□□□ 0
RETREG3-209ENST00000590035 USP6P35125 1406 aa15.08■□□□□ 0
RETREG3-209ENST00000590035 ZC3H6P61129 1189 aaKnown RBP15.07■□□□□ 0
RETREG3-209ENST00000590035 NUTM2GQ5VZR2 741 aa15.07■□□□□ 0
RETREG3-209ENST00000590035 BARGINQ6ZT62 677 aa15.07■□□□□ 0
RETREG3-209ENST00000590035 PIK3C2AO00443 1686 aa15.06■□□□□ 0
RETREG3-209ENST00000590035 SF3B2Q13435 895 aaKnown RBP15.06■□□□□ 0
RETREG3-209ENST00000590035 CABP2Q9NPB3 220 aa15.06■□□□□ 0
RETREG3-209ENST00000590035 COL18A1P39060 1754 aa15.06■□□□□ 0
RETREG3-209ENST00000590035 ABTB2Q8N961 1025 aa15.05■□□□□ -0
RETREG3-209ENST00000590035 COL5A2P05997 1499 aaPredicted RBP15.05■□□□□ -0
RETREG3-209ENST00000590035 PARP4Q9UKK3 1724 aaKnown RBP15.04■□□□□ -0
RETREG3-209ENST00000590035 GCP02774 474 aa15.04■□□□□ -0
RETREG3-209ENST00000590035 BAG6P46379 1132 aa15.04■□□□□ -0
RETREG3-209ENST00000590035 SRPK2P78362 688 aaKnown RBP15.04■□□□□ -0
RETREG3-209ENST00000590035 FAM182BQ5T319 152 aa15.04■□□□□ -0
RETREG3-209ENST00000590035 SIN3AQ96ST3 1273 aa15.04■□□□□ -0
RETREG3-209ENST00000590035 AKAP12Q02952 1782 aa15.03■□□□□ -0
RETREG3-209ENST00000590035 AATKQ6ZMQ8 1374 aa15.02■□□□□ -0
RETREG3-209ENST00000590035 A0A0G2JS52 829 aa15.02■□□□□ -0
RETREG3-209ENST00000590035 MYT1Q01538 1121 aa15.02■□□□□ -0
RETREG3-209ENST00000590035 LARP1Q6PKG0 1096 aaKnown RBP15.02■□□□□ -0
RETREG3-209ENST00000590035 NLRP13Q86W25 1043 aa15.02■□□□□ -0
RETREG3-209ENST00000590035 CABP1Q9NZU7 370 aa15.02■□□□□ -0
RETREG3-209ENST00000590035 PEAK1Q9H792 1746 aa15.02□□□□□ -0.01
RETREG3-209ENST00000590035 RREB1Q92766 1687 aa15.02□□□□□ -0.01
RETREG3-209ENST00000590035 CPSF1Q10570 1443 aaKnown RBP15.01□□□□□ -0.01
RETREG3-209ENST00000590035 SBNO2Q9Y2G9 1366 aa15.01□□□□□ -0.01
RETREG3-209ENST00000590035 EN1Q05925 392 aaPredicted RBP15.01□□□□□ -0.01
RETREG3-209ENST00000590035 CAMKK2Q96RR4 588 aa15.01□□□□□ -0.01
RETREG3-209ENST00000590035 STRN4Q9NRL3 753 aa15.01□□□□□ -0.01
RETREG3-209ENST00000590035 FAM196AQ6ZSG2 479 aa15□□□□□ -0.01
RETREG3-209ENST00000590035 TCP11L2Q8N4U5 519 aa15□□□□□ -0.01
RETREG3-209ENST00000590035 THRAP3Q9Y2W1 955 aaKnown RBP15□□□□□ -0.01
RETREG3-209ENST00000590035 USP54Q70EL1 1684 aa15□□□□□ -0.01
RETREG3-209ENST00000590035 PARD3Q8TEW0 1356 aa14.99□□□□□ -0.01
RETREG3-209ENST00000590035 EVC2Q86UK5 1308 aa14.99□□□□□ -0.01
RETREG3-209ENST00000590035 NFAT5O94916 1531 aa14.99□□□□□ -0.01
RETREG3-209ENST00000590035 CRB1P82279 1406 aa14.99□□□□□ -0.01
RETREG3-209ENST00000590035 WNK3Q9BYP7 1800 aa14.99□□□□□ -0.01
RETREG3-209ENST00000590035 ROCK2O75116 1388 aaKnown RBP14.98□□□□□ -0.01
RETREG3-209ENST00000590035 LRRC37A3O60309 1634 aa14.98□□□□□ -0.01
RETREG3-209ENST00000590035 MON2Q7Z3U7 1717 aa14.97□□□□□ -0.01
RETREG3-209ENST00000590035 NUP188Q5SRE5 1749 aa14.97□□□□□ -0.01
RETREG3-209ENST00000590035 ABCC6O95255 1503 aa14.97□□□□□ -0.01
RETREG3-209ENST00000590035 TTC21BQ7Z4L5 1316 aa14.96□□□□□ -0.01
RETREG3-209ENST00000590035 CD163L1Q9NR16 1453 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms