RNA–Protein interactions for RNA: ENST00000589638.1

TMED1-205, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 578 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-205ENST00000589638 KIF1AQ12756 1690 aa24.02■■□□□ 1.44
TMED1-205ENST00000589638 MORC1Q86VD1 984 aa24.02■■□□□ 1.44
TMED1-205ENST00000589638 NSD2O96028 1365 aa24.02■■□□□ 1.44
TMED1-205ENST00000589638 PAK3O75914 559 aaPredicted RBP24.01■■□□□ 1.43
TMED1-205ENST00000589638 DDX17Q92841 729 aaKnown RBP24.01■■□□□ 1.43
TMED1-205ENST00000589638 SSH2Q76I76 1423 aa24.01■■□□□ 1.43
TMED1-205ENST00000589638 NRKQ7Z2Y5 1582 aa24■■□□□ 1.43
TMED1-205ENST00000589638 ZRANB1Q9UGI0 708 aa24■■□□□ 1.43
TMED1-205ENST00000589638 KRT28Q7Z3Y7 464 aa23.99■■□□□ 1.43
TMED1-205ENST00000589638 TTC21AQ8NDW8 1320 aa23.98■■□□□ 1.43
TMED1-205ENST00000589638 TNNT2P45379 298 aaPredicted RBP23.97■■□□□ 1.43
TMED1-205ENST00000589638 MYBBP1AQ9BQG0 1328 aaKnown RBP23.97■■□□□ 1.43
TMED1-205ENST00000589638 NPHP3Q7Z494 1330 aa23.96■■□□□ 1.43
TMED1-205ENST00000589638 BRD4O60885 1362 aaPredicted RBP23.95■■□□□ 1.42
TMED1-205ENST00000589638 CERKQ8TCT0 537 aa23.95■■□□□ 1.42
TMED1-205ENST00000589638 COG3Q96JB2 828 aa23.95■■□□□ 1.42
TMED1-205ENST00000589638 KIF20BQ96Q89 1820 aa23.94■■□□□ 1.42
TMED1-205ENST00000589638 CCER2I3L3R5 266 aa23.93■■□□□ 1.42
TMED1-205ENST00000589638 TOM1O60784 492 aa23.93■■□□□ 1.42
TMED1-205ENST00000589638 PPP2R1AP30153 589 aa23.93■■□□□ 1.42
TMED1-205ENST00000589638 NUTM2GQ5VZR2 741 aa23.93■■□□□ 1.42
TMED1-205ENST00000589638 ABTB2Q8N961 1025 aa23.93■■□□□ 1.42
TMED1-205ENST00000589638 UBAP1LF5GYI3 381 aa23.92■■□□□ 1.42
TMED1-205ENST00000589638 LMOD2Q6P5Q4 547 aa23.91■■□□□ 1.42
TMED1-205ENST00000589638 IQSEC2Q5JU85 1478 aa23.9■■□□□ 1.42
TMED1-205ENST00000589638 NLRP6P59044 892 aa23.9■■□□□ 1.42
TMED1-205ENST00000589638 PIP4K2BP78356 416 aa23.9■■□□□ 1.42
TMED1-205ENST00000589638 CCDC184Q52MB2 194 aa23.9■■□□□ 1.42
TMED1-205ENST00000589638 SCAF1Q9H7N4 1312 aaKnown RBP23.89■■□□□ 1.42
TMED1-205ENST00000589638 NLRP13Q86W25 1043 aa23.89■■□□□ 1.41
TMED1-205ENST00000589638 OVOS2A0A0J9YW53 1432 aa23.89■■□□□ 1.41
TMED1-205ENST00000589638 OVOS2Q6IE36 1432 aa23.89■■□□□ 1.41
TMED1-205ENST00000589638 PXDNQ92626 1479 aa23.88■■□□□ 1.41
TMED1-205ENST00000589638 MRS2Q9HD23 443 aa23.88■■□□□ 1.41
TMED1-205ENST00000589638 PIK3C2AO00443 1686 aa23.88■■□□□ 1.41
TMED1-205ENST00000589638 USP31Q70CQ4 1352 aa23.88■■□□□ 1.41
TMED1-205ENST00000589638 ANKRD26Q9UPS8 1709 aa23.87■■□□□ 1.41
TMED1-205ENST00000589638 PLEKHG5O94827 1062 aa23.87■■□□□ 1.41
TMED1-205ENST00000589638 SBNO1A3KN83 1393 aa23.87■■□□□ 1.41
TMED1-205ENST00000589638 SOX12O15370 315 aa23.86■■□□□ 1.41
TMED1-205ENST00000589638 FBLN1P23142 703 aa23.86■■□□□ 1.41
TMED1-205ENST00000589638 TRPM3Q9HCF6 1732 aaPredicted RBP23.86■■□□□ 1.41
TMED1-205ENST00000589638 ROBO1Q9Y6N7 1651 aa23.86■■□□□ 1.41
TMED1-205ENST00000589638 SOS2Q07890 1332 aaPredicted RBP23.84■■□□□ 1.41
TMED1-205ENST00000589638 TNS3Q68CZ2 1445 aa23.84■■□□□ 1.41
TMED1-205ENST00000589638 SPATA31A3Q5VYP0 1347 aa23.83■■□□□ 1.4
TMED1-205ENST00000589638 NHSL1Q5SYE7 1610 aa23.81■■□□□ 1.4
TMED1-205ENST00000589638 MTHFSP49914 203 aa23.8■■□□□ 1.4
TMED1-205ENST00000589638 RRS1Q15050 365 aaKnown RBP23.79■■□□□ 1.4
TMED1-205ENST00000589638 AATKQ6ZMQ8 1374 aa23.78■■□□□ 1.4
TMED1-205ENST00000589638 PPM1GO15355 546 aaPredicted RBP23.78■■□□□ 1.4
TMED1-205ENST00000589638 ARHGEF10O15013 1369 aa23.78■■□□□ 1.4
TMED1-205ENST00000589638 ALS2Q96Q42 1657 aa23.77■■□□□ 1.4
TMED1-205ENST00000589638 POLKQ9UBT6 870 aa23.77■■□□□ 1.4
TMED1-205ENST00000589638 EMILIN1Q9Y6C2 1016 aa23.77■■□□□ 1.4
TMED1-205ENST00000589638 AHDC1Q5TGY3 1603 aaPredicted RBP23.77■■□□□ 1.4
TMED1-205ENST00000589638 USP54Q70EL1 1684 aa23.75■■□□□ 1.39
TMED1-205ENST00000589638 USP19O94966 1318 aa23.75■■□□□ 1.39
TMED1-205ENST00000589638 MARF1Q9Y4F3 1742 aaKnown RBP23.75■■□□□ 1.39
TMED1-205ENST00000589638 CFAP53Q96M91 514 aa23.74■■□□□ 1.39
TMED1-205ENST00000589638 FAM9BQ8IZU0 186 aa23.73■■□□□ 1.39
TMED1-205ENST00000589638 KCNH5Q8NCM2 988 aa23.73■■□□□ 1.39
TMED1-205ENST00000589638 CABLES1Q8TDN4 633 aa23.73■■□□□ 1.39
TMED1-205ENST00000589638 ZBTB7CA1YPR0 619 aa23.72■■□□□ 1.39
TMED1-205ENST00000589638 GCP02774 474 aa23.72■■□□□ 1.39
TMED1-205ENST00000589638 LRRC59Q96AG4 307 aaKnown RBP23.72■■□□□ 1.39
TMED1-205ENST00000589638 SLIT3O75094 1523 aa23.72■■□□□ 1.39
TMED1-205ENST00000589638 MED1Q15648 1581 aaPredicted RBP23.71■■□□□ 1.39
TMED1-205ENST00000589638 MAP3K19Q56UN5 1328 aa23.71■■□□□ 1.39
TMED1-205ENST00000589638 SMG6Q86US8 1419 aaKnown RBP23.7■■□□□ 1.38
TMED1-205ENST00000589638 PNISRQ8TF01 805 aaKnown RBP23.7■■□□□ 1.38
TMED1-205ENST00000589638 PHLPP1O60346 1717 aa23.69■■□□□ 1.38
TMED1-205ENST00000589638 NFAT5O94916 1531 aa23.69■■□□□ 1.38
TMED1-205ENST00000589638 AMPHP49418 695 aa23.68■■□□□ 1.38
TMED1-205ENST00000589638 HAP1P54257 671 aaPredicted RBP23.67■■□□□ 1.38
TMED1-205ENST00000589638 ZC3H6P61129 1189 aaKnown RBP23.66■■□□□ 1.38
TMED1-205ENST00000589638 WDR43Q15061 677 aaKnown RBP eCLIP23.66■■□□□ 1.38
TMED1-205ENST00000589638 YTHDC1Q96MU7 727 aaKnown RBP23.66■■□□□ 1.38
TMED1-205ENST00000589638 CDK12Q9NYV4 1490 aaPredicted RBP23.66■■□□□ 1.38
TMED1-205ENST00000589638 COL16A1Q07092 1604 aaPredicted RBP23.66■■□□□ 1.38
TMED1-205ENST00000589638 COL3A1P02461 1466 aaPredicted RBP23.65■■□□□ 1.38
TMED1-205ENST00000589638 PNPLA6Q8IY17 1366 aa23.65■■□□□ 1.38
TMED1-205ENST00000589638 MAP2P11137 1827 aaKnown RBP23.64■■□□□ 1.38
TMED1-205ENST00000589638 DIAPH1O60610 1272 aaKnown RBP23.64■■□□□ 1.37
TMED1-205ENST00000589638 FLT4P35916 1363 aa23.64■■□□□ 1.37
TMED1-205ENST00000589638 PHRF1Q9P1Y6 1649 aaKnown RBP23.63■■□□□ 1.37
TMED1-205ENST00000589638 HSP90AB2PQ58FF8 381 aa23.63■■□□□ 1.37
TMED1-205ENST00000589638 ARHGEF25Q86VW2 580 aa23.63■■□□□ 1.37
TMED1-205ENST00000589638 PEAK1Q9H792 1746 aa23.63■■□□□ 1.37
TMED1-205ENST00000589638 HOXC9P31274 260 aa23.62■■□□□ 1.37
TMED1-205ENST00000589638 INSRP06213 1382 aa23.62■■□□□ 1.37
TMED1-205ENST00000589638 NUDCQ9Y266 331 aa23.61■■□□□ 1.37
TMED1-205ENST00000589638 U2SURPO15042 1029 aaKnown RBP23.6■■□□□ 1.37
TMED1-205ENST00000589638 RTL1A6NKG5 1358 aa23.6■■□□□ 1.37
TMED1-205ENST00000589638 CRYBG1Q9Y4K1 1723 aa23.59■■□□□ 1.37
TMED1-205ENST00000589638 IP6K1Q92551 441 aa23.59■■□□□ 1.37
TMED1-205ENST00000589638 ADAMTS8Q9UP79 889 aa23.59■■□□□ 1.37
TMED1-205ENST00000589638 KIF24Q5T7B8 1368 aa23.59■■□□□ 1.37
TMED1-205ENST00000589638 KIAA0232Q92628 1395 aa23.58■■□□□ 1.37
TMED1-205ENST00000589638 IL13P35225 146 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms