RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 POTEEQ6S8J3 1075 aa8.72□□□□□ -1.01
LINC01539-202ENST00000589293 KANK1Q14678 1352 aa8.72□□□□□ -1.01
LINC01539-202ENST00000589293 NUTM2FA1L443 756 aa8.71□□□□□ -1.02
LINC01539-202ENST00000589293 MAP3K7O43318 606 aa8.71□□□□□ -1.02
LINC01539-202ENST00000589293 FBXW7Q969H0 707 aa8.71□□□□□ -1.02
LINC01539-202ENST00000589293 ZC3H13Q5T200 1668 aaKnown RBP8.71□□□□□ -1.02
LINC01539-202ENST00000589293 MYOM3Q5VTT5 1437 aa8.71□□□□□ -1.02
LINC01539-202ENST00000589293 VPS8Q8N3P4 1428 aa8.71□□□□□ -1.02
LINC01539-202ENST00000589293 LRRC9Q6ZRR7 1453 aa8.7□□□□□ -1.02
LINC01539-202ENST00000589293 NEURL4Q96JN8 1562 aa8.7□□□□□ -1.02
LINC01539-202ENST00000589293 DEPDC5O75140 1603 aa8.7□□□□□ -1.02
LINC01539-202ENST00000589293 C6orf132Q5T0Z8 1188 aa8.7□□□□□ -1.02
LINC01539-202ENST00000589293 BARGINQ6ZT62 677 aa8.7□□□□□ -1.02
LINC01539-202ENST00000589293 TXNDC2Q86VQ3 553 aa8.7□□□□□ -1.02
LINC01539-202ENST00000589293 MED14O60244 1454 aa8.7□□□□□ -1.02
LINC01539-202ENST00000589293 IQGAP1P46940 1657 aa8.69□□□□□ -1.02
LINC01539-202ENST00000589293 COL9A1P20849 921 aa8.69□□□□□ -1.02
LINC01539-202ENST00000589293 VARS2Q5ST30 1063 aaKnown RBP8.69□□□□□ -1.02
LINC01539-202ENST00000589293 ABCC3O15438 1527 aa8.69□□□□□ -1.02
LINC01539-202ENST00000589293 MED1Q15648 1581 aaPredicted RBP8.69□□□□□ -1.02
LINC01539-202ENST00000589293 EIF2AK4Q9P2K8 1649 aaKnown RBP8.69□□□□□ -1.02
LINC01539-202ENST00000589293 EMP3P54852 163 aa8.68□□□□□ -1.02
LINC01539-202ENST00000589293 PPP4R3BQ5MIZ7 849 aa8.68□□□□□ -1.02
LINC01539-202ENST00000589293 BCL2L12Q9HB09 334 aa8.68□□□□□ -1.02
LINC01539-202ENST00000589293 RRP7BPQ9NSQ0 103 aa8.68□□□□□ -1.02
LINC01539-202ENST00000589293 KIF15Q9NS87 1388 aa8.68□□□□□ -1.02
LINC01539-202ENST00000589293 ERVK-7P63135 1459 aa8.68□□□□□ -1.02
LINC01539-202ENST00000589293 DUOX2Q9NRD8 1548 aa8.68□□□□□ -1.02
LINC01539-202ENST00000589293 VWDEQ8N2E2 1590 aa8.68□□□□□ -1.02
LINC01539-202ENST00000589293 MAST1Q9Y2H9 1570 aa8.68□□□□□ -1.02
LINC01539-202ENST00000589293 RNF17Q9BXT8 1623 aaKnown RBP8.68□□□□□ -1.02
LINC01539-202ENST00000589293 SCAF11Q99590 1463 aaKnown RBP8.67□□□□□ -1.02
LINC01539-202ENST00000589293 SLC24A3Q9HC58 644 aa8.67□□□□□ -1.02
LINC01539-202ENST00000589293 SYNMO15061 1565 aa8.66□□□□□ -1.02
LINC01539-202ENST00000589293 ERBB3P21860 1342 aa8.66□□□□□ -1.02
LINC01539-202ENST00000589293 FAM205CA6NFA0 338 aa8.66□□□□□ -1.02
LINC01539-202ENST00000589293 MAP3K1Q13233 1512 aa8.65□□□□□ -1.02
LINC01539-202ENST00000589293 LRRC7Q96NW7 1537 aa8.65□□□□□ -1.02
LINC01539-202ENST00000589293 ERBINQ96RT1 1412 aa8.65□□□□□ -1.02
LINC01539-202ENST00000589293 LOC105371045A0A1W2PR82 267 aa8.65□□□□□ -1.02
LINC01539-202ENST00000589293 PSDA5PKW4 1024 aaPredicted RBP8.65□□□□□ -1.02
LINC01539-202ENST00000589293 FCHSD2O94868 740 aa8.65□□□□□ -1.02
LINC01539-202ENST00000589293 KANK4Q5T7N3 995 aaPredicted RBP8.65□□□□□ -1.02
LINC01539-202ENST00000589293 FAM198AQ9UFP1 575 aa8.65□□□□□ -1.02
LINC01539-202ENST00000589293 ANKRD30AQ9BXX3 1397 aa8.64□□□□□ -1.03
LINC01539-202ENST00000589293 CEP152O94986 1710 aa8.64□□□□□ -1.03
LINC01539-202ENST00000589293 GNPATO15228 680 aa8.64□□□□□ -1.03
LINC01539-202ENST00000589293 HDGFP51858 240 aaKnown RBP8.64□□□□□ -1.03
LINC01539-202ENST00000589293 HIC1Q14526 733 aa8.64□□□□□ -1.03
LINC01539-202ENST00000589293 HS3ST6Q96QI5 342 aa8.64□□□□□ -1.03
LINC01539-202ENST00000589293 CFAP65Q6ZU64 1925 aaKnown RBP8.64□□□□□ -1.03
LINC01539-202ENST00000589293 ARHGAP31Q2M1Z3 1444 aa8.63□□□□□ -1.03
LINC01539-202ENST00000589293 PPP1R15AO75807 674 aaPredicted RBP8.63□□□□□ -1.03
LINC01539-202ENST00000589293 LTKP29376 864 aa8.63□□□□□ -1.03
LINC01539-202ENST00000589293 PSEN2P49810 448 aa8.63□□□□□ -1.03
LINC01539-202ENST00000589293 PROSER2Q86WR7 435 aaPredicted RBP8.63□□□□□ -1.03
LINC01539-202ENST00000589293 CHIC2Q9UKJ5 165 aa8.63□□□□□ -1.03
LINC01539-202ENST00000589293 UBR1Q8IWV7 1749 aa8.63□□□□□ -1.03
LINC01539-202ENST00000589293 C3orf80F5H4A9 247 aa8.62□□□□□ -1.03
LINC01539-202ENST00000589293 TTC13Q8NBP0 860 aa8.62□□□□□ -1.03
LINC01539-202ENST00000589293 AXIN2Q9Y2T1 843 aa8.62□□□□□ -1.03
LINC01539-202ENST00000589293 TMEM2Q9UHN6 1383 aa8.61□□□□□ -1.03
LINC01539-202ENST00000589293 SLIT1O75093 1534 aa8.61□□□□□ -1.03
LINC01539-202ENST00000589293 PRDM15P57071 1507 aaPredicted RBP8.61□□□□□ -1.03
LINC01539-202ENST00000589293 KCNA6P17658 529 aa8.61□□□□□ -1.03
LINC01539-202ENST00000589293 FAM50AQ14320 339 aaKnown RBP8.61□□□□□ -1.03
LINC01539-202ENST00000589293 PADI6Q6TGC4 694 aa8.61□□□□□ -1.03
LINC01539-202ENST00000589293 C14orf37Q86TY3 774 aa8.61□□□□□ -1.03
LINC01539-202ENST00000589293 KCNK17Q96T54 332 aa8.61□□□□□ -1.03
LINC01539-202ENST00000589293 ABCC5O15440 1437 aa8.61□□□□□ -1.03
LINC01539-202ENST00000589293 DAPK1P53355 1430 aa8.61□□□□□ -1.03
LINC01539-202ENST00000589293 PTPN23Q9H3S7 1636 aa8.61□□□□□ -1.03
LINC01539-202ENST00000589293 EFCAB6Q5THR3 1501 aa8.6□□□□□ -1.03
LINC01539-202ENST00000589293 ARHGAP23Q9P227 1491 aa8.6□□□□□ -1.03
LINC01539-202ENST00000589293 PPP1R3GB7ZBB8 358 aa8.6□□□□□ -1.03
LINC01539-202ENST00000589293 PTPREP23469 700 aa8.6□□□□□ -1.03
LINC01539-202ENST00000589293 MAP2K5Q13163 448 aa8.6□□□□□ -1.03
LINC01539-202ENST00000589293 FAM161AQ3B820 660 aa8.6□□□□□ -1.03
LINC01539-202ENST00000589293 DMRTA1Q5VZB9 504 aa8.6□□□□□ -1.03
LINC01539-202ENST00000589293 ZNF687Q8N1G0 1237 aa8.6□□□□□ -1.03
LINC01539-202ENST00000589293 CCDC102AQ96A19 550 aa8.6□□□□□ -1.03
LINC01539-202ENST00000589293 SLC26A8Q96RN1 970 aa8.6□□□□□ -1.03
LINC01539-202ENST00000589293 SLC52A1Q9NWF4 448 aa8.6□□□□□ -1.03
LINC01539-202ENST00000589293 TSKSQ9UJT2 592 aa8.6□□□□□ -1.03
LINC01539-202ENST00000589293 MROH1Q8NDA8 1641 aa8.6□□□□□ -1.03
LINC01539-202ENST00000589293 MSH6P52701 1360 aa8.6□□□□□ -1.03
LINC01539-202ENST00000589293 TMEM94Q12767 1356 aa8.6□□□□□ -1.03
LINC01539-202ENST00000589293 IRF6O14896 467 aa8.59□□□□□ -1.03
LINC01539-202ENST00000589293 IDI1Q13907 227 aa8.59□□□□□ -1.03
LINC01539-202ENST00000589293 FGD6Q6ZV73 1430 aa8.59□□□□□ -1.03
LINC01539-202ENST00000589293 PIK3C2BO00750 1634 aa8.58□□□□□ -1.04
LINC01539-202ENST00000589293 FAM135BQ49AJ0 1406 aa8.58□□□□□ -1.04
LINC01539-202ENST00000589293 PRSS12P56730 875 aa8.58□□□□□ -1.04
LINC01539-202ENST00000589293 PROX2Q3B8N5 592 aa8.58□□□□□ -1.04
LINC01539-202ENST00000589293 CDCA7LQ96GN5 454 aa8.58□□□□□ -1.04
LINC01539-202ENST00000589293 PHOX2BQ99453 314 aa8.58□□□□□ -1.04
LINC01539-202ENST00000589293 CROCC2H7BZ55 1655 aa8.58□□□□□ -1.04
LINC01539-202ENST00000589293 STRCP1A6NGW2 1772 aa8.58□□□□□ -1.04
LINC01539-202ENST00000589293 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.57□□□□□ -1.04
LINC01539-202ENST00000589293 ZBED2Q9BTP6 218 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms