RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 KDM4CQ9H3R0 1056 aa9.66□□□□□ -0.86
ZNF540-206ENST00000589117 TRAK1Q9UPV9 953 aa9.66□□□□□ -0.86
ZNF540-206ENST00000589117 NLRP6P59044 892 aa9.65□□□□□ -0.86
ZNF540-206ENST00000589117 MORC1Q86VD1 984 aa9.65□□□□□ -0.86
ZNF540-206ENST00000589117 IFT172Q9UG01 1749 aa9.65□□□□□ -0.86
ZNF540-206ENST00000589117 EVC2Q86UK5 1308 aa9.65□□□□□ -0.87
ZNF540-206ENST00000589117 E9PSI1 815 aa9.65□□□□□ -0.87
ZNF540-206ENST00000589117 ARID3AQ99856 593 aa9.65□□□□□ -0.87
ZNF540-206ENST00000589117 MYO3AQ8NEV4 1616 aa9.64□□□□□ -0.87
ZNF540-206ENST00000589117 DUSP27Q5VZP5 1158 aa9.64□□□□□ -0.87
ZNF540-206ENST00000589117 CFAP53Q96M91 514 aa9.64□□□□□ -0.87
ZNF540-206ENST00000589117 CRISPLD2Q9H0B8 497 aa9.64□□□□□ -0.87
ZNF540-206ENST00000589117 FARP1Q9Y4F1 1045 aaPredicted RBP9.64□□□□□ -0.87
ZNF540-206ENST00000589117 CGNL1Q0VF96 1302 aa9.64□□□□□ -0.87
ZNF540-206ENST00000589117 ZNF521Q96K83 1311 aa9.64□□□□□ -0.87
ZNF540-206ENST00000589117 RAPGEF3O95398 923 aa9.64□□□□□ -0.87
ZNF540-206ENST00000589117 SLFN5Q08AF3 891 aa9.64□□□□□ -0.87
ZNF540-206ENST00000589117 MFSD10Q14728 455 aa9.64□□□□□ -0.87
ZNF540-206ENST00000589117 CARD14Q9BXL6 1004 aa9.64□□□□□ -0.87
ZNF540-206ENST00000589117 ZMYND15Q9H091 742 aa9.64□□□□□ -0.87
ZNF540-206ENST00000589117 MYOM1P52179 1685 aa9.63□□□□□ -0.87
ZNF540-206ENST00000589117 ABCC3O15438 1527 aa9.63□□□□□ -0.87
ZNF540-206ENST00000589117 ARHGAP31Q2M1Z3 1444 aa9.63□□□□□ -0.87
ZNF540-206ENST00000589117 POLR3AO14802 1390 aaPredicted RBP9.63□□□□□ -0.87
ZNF540-206ENST00000589117 AK7Q96M32 723 aa9.63□□□□□ -0.87
ZNF540-206ENST00000589117 MAP3K13O43283 966 aa9.62□□□□□ -0.87
ZNF540-206ENST00000589117 FRMPD1Q5SYB0 1578 aa9.62□□□□□ -0.87
ZNF540-206ENST00000589117 APAF1O14727 1248 aa9.62□□□□□ -0.87
ZNF540-206ENST00000589117 PLIN1O60240 522 aa9.62□□□□□ -0.87
ZNF540-206ENST00000589117 IPO9Q96P70 1041 aaKnown RBP9.62□□□□□ -0.87
ZNF540-206ENST00000589117 NOP58Q9Y2X3 529 aaKnown RBP9.62□□□□□ -0.87
ZNF540-206ENST00000589117 PLEKHH1Q9ULM0 1364 aa9.62□□□□□ -0.87
ZNF540-206ENST00000589117 DDX27Q96GQ7 796 aaKnown RBP9.61□□□□□ -0.87
ZNF540-206ENST00000589117 CRBNQ96SW2 442 aa9.61□□□□□ -0.87
ZNF540-206ENST00000589117 MROH2AA6NES4 1674 aa9.61□□□□□ -0.87
ZNF540-206ENST00000589117 TMEM132EQ6IEE7 984 aa9.61□□□□□ -0.87
ZNF540-206ENST00000589117 CENPQQ7L2Z9 268 aaPredicted RBP9.61□□□□□ -0.87
ZNF540-206ENST00000589117 GPIHBP1Q8IV16 184 aa9.61□□□□□ -0.87
ZNF540-206ENST00000589117 PPLO60437 1756 aa9.61□□□□□ -0.87
ZNF540-206ENST00000589117 NSD2O96028 1365 aa9.61□□□□□ -0.87
ZNF540-206ENST00000589117 ZFYVE9O95405 1425 aa9.6□□□□□ -0.87
ZNF540-206ENST00000589117 MKRN3Q13064 507 aaKnown RBP9.6□□□□□ -0.87
ZNF540-206ENST00000589117 CCDC146Q8IYE0 955 aa9.6□□□□□ -0.87
ZNF540-206ENST00000589117 TRMT2AQ8IZ69 625 aaKnown RBP9.6□□□□□ -0.87
ZNF540-206ENST00000589117 NSD3Q9BZ95 1437 aa9.6□□□□□ -0.87
ZNF540-206ENST00000589117 SLC12A5Q9H2X9 1139 aa9.6□□□□□ -0.87
ZNF540-206ENST00000589117 NINLQ9Y2I6 1382 aa9.6□□□□□ -0.87
ZNF540-206ENST00000589117 CAMSAP1Q5T5Y3 1602 aa9.6□□□□□ -0.87
ZNF540-206ENST00000589117 NKTRP30414 1462 aaKnown RBP9.6□□□□□ -0.87
ZNF540-206ENST00000589117 SMYD5Q6GMV2 418 aa9.6□□□□□ -0.87
ZNF540-206ENST00000589117 ZC3H13Q5T200 1668 aaKnown RBP9.59□□□□□ -0.87
ZNF540-206ENST00000589117 TRIM66O15016 1216 aa9.59□□□□□ -0.87
ZNF540-206ENST00000589117 SOX12O15370 315 aa9.59□□□□□ -0.87
ZNF540-206ENST00000589117 CAMK2BQ13554 666 aa9.59□□□□□ -0.87
ZNF540-206ENST00000589117 IDI1Q13907 227 aa9.59□□□□□ -0.87
ZNF540-206ENST00000589117 KRI1Q8N9T8 703 aaKnown RBP9.59□□□□□ -0.87
ZNF540-206ENST00000589117 RUNDC1Q96C34 613 aa9.59□□□□□ -0.87
ZNF540-206ENST00000589117 ADGRB1O14514 1584 aa9.59□□□□□ -0.87
ZNF540-206ENST00000589117 PDE4AP27815 886 aa9.59□□□□□ -0.87
ZNF540-206ENST00000589117 PDE4DQ08499 809 aa9.58□□□□□ -0.88
ZNF540-206ENST00000589117 FAM117AQ9C073 453 aa9.58□□□□□ -0.88
ZNF540-206ENST00000589117 QRICH2Q9H0J4 1663 aa9.58□□□□□ -0.88
ZNF540-206ENST00000589117 ANKRD36BQ8N2N9 1353 aa9.58□□□□□ -0.88
ZNF540-206ENST00000589117 TERF2IPQ9NYB0 399 aa9.57□□□□□ -0.88
ZNF540-206ENST00000589117 ARIH1Q9Y4X5 557 aaPredicted RBP9.57□□□□□ -0.88
ZNF540-206ENST00000589117 CFAP65Q6ZU64 1925 aaKnown RBP9.57□□□□□ -0.88
ZNF540-206ENST00000589117 DIP2CQ9Y2E4 1556 aa9.57□□□□□ -0.88
ZNF540-206ENST00000589117 AAMPQ13685 434 aa9.57□□□□□ -0.88
ZNF540-206ENST00000589117 WWC1Q8IX03 1113 aa9.57□□□□□ -0.88
ZNF540-206ENST00000589117 BACH2Q9BYV9 841 aa9.57□□□□□ -0.88
ZNF540-206ENST00000589117 PIK3C2BO00750 1634 aa9.56□□□□□ -0.88
ZNF540-206ENST00000589117 CANXP27824 592 aaKnown RBP9.56□□□□□ -0.88
ZNF540-206ENST00000589117 PDE3AQ14432 1141 aa9.56□□□□□ -0.88
ZNF540-206ENST00000589117 WDR63Q8IWG1 891 aa9.56□□□□□ -0.88
ZNF540-206ENST00000589117 RSPH6AQ9H0K4 717 aa9.56□□□□□ -0.88
ZNF540-206ENST00000589117 TNNT2P45379 298 aaPredicted RBP9.56□□□□□ -0.88
ZNF540-206ENST00000589117 MTHFSP49914 203 aa9.56□□□□□ -0.88
ZNF540-206ENST00000589117 SRPK2P78362 688 aaKnown RBP9.56□□□□□ -0.88
ZNF540-206ENST00000589117 POGKQ9P215 609 aa9.56□□□□□ -0.88
ZNF540-206ENST00000589117 ATAD2Q6PL18 1390 aa9.55□□□□□ -0.88
ZNF540-206ENST00000589117 PNNQ9H307 717 aaKnown RBP9.55□□□□□ -0.88
ZNF540-206ENST00000589117 NEXMIFQ5QGS0 1516 aa9.55□□□□□ -0.88
ZNF540-206ENST00000589117 GLI2P10070 1586 aa9.55□□□□□ -0.88
ZNF540-206ENST00000589117 USP32Q8NFA0 1604 aa9.55□□□□□ -0.88
ZNF540-206ENST00000589117 CCDC27Q2M243 656 aa9.55□□□□□ -0.88
ZNF540-206ENST00000589117 C20orf194Q5TEA3 1177 aa9.55□□□□□ -0.88
ZNF540-206ENST00000589117 NUTM2DQ5VT03 806 aaPredicted RBP9.55□□□□□ -0.88
ZNF540-206ENST00000589117 CYB5RLQ6IPT4 315 aa9.55□□□□□ -0.88
ZNF540-206ENST00000589117 KIF12Q96FN5 646 aa9.55□□□□□ -0.88
ZNF540-206ENST00000589117 DDRGK1Q96HY6 314 aa9.55□□□□□ -0.88
ZNF540-206ENST00000589117 MYH16Q9H6N6 1097 aa9.54□□□□□ -0.88
ZNF540-206ENST00000589117 RICTORQ6R327 1708 aa9.54□□□□□ -0.88
ZNF540-206ENST00000589117 TCP11L2Q8N4U5 519 aa9.54□□□□□ -0.88
ZNF540-206ENST00000589117 STK26Q9P289 416 aa9.54□□□□□ -0.88
ZNF540-206ENST00000589117 FAM69CQ0P6D2 419 aa9.53□□□□□ -0.88
ZNF540-206ENST00000589117 HDGFL2Q7Z4V5 671 aaPredicted RBP9.53□□□□□ -0.88
ZNF540-206ENST00000589117 KDM2BQ8NHM5 1336 aa9.53□□□□□ -0.88
ZNF540-206ENST00000589117 GPR37O15354 613 aa9.53□□□□□ -0.88
ZNF540-206ENST00000589117 U2AF1L5P0DN76 240 aaPredicted RBP9.53□□□□□ -0.88
ZNF540-206ENST00000589117 U2AF1Q01081 240 aaKnown RBP eCLIP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms