RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 MYT1Q01538 1121 aa13.73□□□□□ -0.21
APOC1-204ENST00000589078 KRT28Q7Z3Y7 464 aa13.73□□□□□ -0.21
APOC1-204ENST00000589078 CENPJQ9HC77 1338 aaPredicted RBP13.72□□□□□ -0.21
APOC1-204ENST00000589078 NBPF8Q3BBV2 869 aa13.72□□□□□ -0.21
APOC1-204ENST00000589078 HIRIP3Q9BW71 556 aaPredicted RBP13.72□□□□□ -0.21
APOC1-204ENST00000589078 CARD11Q9BXL7 1154 aa13.72□□□□□ -0.21
APOC1-204ENST00000589078 GPRASP1Q5JY77 1395 aa13.71□□□□□ -0.22
APOC1-204ENST00000589078 WASLO00401 505 aaPredicted RBP13.7□□□□□ -0.22
APOC1-204ENST00000589078 COL14A1Q05707 1796 aaKnown RBP13.69□□□□□ -0.22
APOC1-204ENST00000589078 EN1Q05925 392 aaPredicted RBP13.69□□□□□ -0.22
APOC1-204ENST00000589078 R3HDM1Q15032 1099 aaKnown RBP13.69□□□□□ -0.22
APOC1-204ENST00000589078 FAM98CQ17RN3 349 aaKnown RBP13.69□□□□□ -0.22
APOC1-204ENST00000589078 PHF8Q9UPP1 1060 aa13.69□□□□□ -0.22
APOC1-204ENST00000589078 ANKARQ7Z5J8 1434 aa13.69□□□□□ -0.22
APOC1-204ENST00000589078 TRPM3Q9HCF6 1732 aaPredicted RBP13.69□□□□□ -0.22
APOC1-204ENST00000589078 SBNO1A3KN83 1393 aa13.69□□□□□ -0.22
APOC1-204ENST00000589078 ARHGEF10O15013 1369 aa13.69□□□□□ -0.22
APOC1-204ENST00000589078 THSD7AQ9UPZ6 1657 aa13.69□□□□□ -0.22
APOC1-204ENST00000589078 PSME1Q06323 249 aa13.68□□□□□ -0.22
APOC1-204ENST00000589078 LMOD2Q6P5Q4 547 aa13.68□□□□□ -0.22
APOC1-204ENST00000589078 TRPM1Q7Z4N2 1603 aa13.68□□□□□ -0.22
APOC1-204ENST00000589078 ADGRB2O60241 1585 aa13.67□□□□□ -0.22
APOC1-204ENST00000589078 DISP2A7MBM2 1401 aa13.67□□□□□ -0.22
APOC1-204ENST00000589078 ALS2Q96Q42 1657 aa13.67□□□□□ -0.22
APOC1-204ENST00000589078 FAM83GA6ND36 823 aa13.67□□□□□ -0.22
APOC1-204ENST00000589078 FAM182BQ5T319 152 aa13.66□□□□□ -0.22
APOC1-204ENST00000589078 CDK19Q9BWU1 502 aa13.66□□□□□ -0.22
APOC1-204ENST00000589078 CRYBG1Q9Y4K1 1723 aa13.66□□□□□ -0.22
APOC1-204ENST00000589078 SRPK2P78362 688 aaKnown RBP13.65□□□□□ -0.22
APOC1-204ENST00000589078 BTG4Q9NY30 223 aa13.65□□□□□ -0.22
APOC1-204ENST00000589078 EVC2Q86UK5 1308 aa13.64□□□□□ -0.23
APOC1-204ENST00000589078 ARHGEF28Q8N1W1 1705 aaKnown RBP13.64□□□□□ -0.23
APOC1-204ENST00000589078 RREB1Q92766 1687 aa13.64□□□□□ -0.23
APOC1-204ENST00000589078 SLC24A1O60721 1099 aa13.64□□□□□ -0.23
APOC1-204ENST00000589078 TULP4Q9NRJ4 1543 aa13.64□□□□□ -0.23
APOC1-204ENST00000589078 NUDT16Q96DE0 195 aaKnown RBP13.63□□□□□ -0.23
APOC1-204ENST00000589078 NUP188Q5SRE5 1749 aa13.62□□□□□ -0.23
APOC1-204ENST00000589078 NGDNQ8NEJ9 315 aaKnown RBP13.62□□□□□ -0.23
APOC1-204ENST00000589078 CCDC61Q9Y6R9 512 aa13.62□□□□□ -0.23
APOC1-204ENST00000589078 SPATA31A5Q5VU36 1347 aa13.62□□□□□ -0.23
APOC1-204ENST00000589078 SPATA31A7Q8IWB4 1347 aa13.62□□□□□ -0.23
APOC1-204ENST00000589078 EZH2Q15910 746 aaKnown RBP13.61□□□□□ -0.23
APOC1-204ENST00000589078 PMFBP1Q8TBY8 1022 aa13.61□□□□□ -0.23
APOC1-204ENST00000589078 PRR36Q9H6K5 1346 aa13.61□□□□□ -0.23
APOC1-204ENST00000589078 SBNO2Q9Y2G9 1366 aa13.6□□□□□ -0.23
APOC1-204ENST00000589078 YY1P25490 414 aa13.59□□□□□ -0.23
APOC1-204ENST00000589078 CABP2Q9NPB3 220 aa13.59□□□□□ -0.23
APOC1-204ENST00000589078 ATP7BP35670 1465 aa13.59□□□□□ -0.23
APOC1-204ENST00000589078 USP47Q96K76 1375 aa13.58□□□□□ -0.23
APOC1-204ENST00000589078 PHRF1Q9P1Y6 1649 aaKnown RBP13.58□□□□□ -0.24
APOC1-204ENST00000589078 ST20-MTHFSA0A0A6YYL1 179 aa13.57□□□□□ -0.24
APOC1-204ENST00000589078 PLEKHG3A1L390 1219 aa13.57□□□□□ -0.24
APOC1-204ENST00000589078 TRIM37O94972 964 aa13.57□□□□□ -0.24
APOC1-204ENST00000589078 CAMKK2Q96RR4 588 aa13.57□□□□□ -0.24
APOC1-204ENST00000589078 PARD3Q8TEW0 1356 aa13.57□□□□□ -0.24
APOC1-204ENST00000589078 QRICH2Q9H0J4 1663 aa13.56□□□□□ -0.24
APOC1-204ENST00000589078 SPATA31A1Q5TZJ5 1347 aa13.55□□□□□ -0.24
APOC1-204ENST00000589078 PPIP5K1Q6PFW1 1433 aa13.55□□□□□ -0.24
APOC1-204ENST00000589078 PAK3O75914 559 aaPredicted RBP13.54□□□□□ -0.24
APOC1-204ENST00000589078 APBA3O96018 575 aa13.54□□□□□ -0.24
APOC1-204ENST00000589078 TMF1P82094 1093 aa13.54□□□□□ -0.24
APOC1-204ENST00000589078 CDCA8Q53HL2 280 aa13.54□□□□□ -0.24
APOC1-204ENST00000589078 FAM196AQ6ZSG2 479 aa13.54□□□□□ -0.24
APOC1-204ENST00000589078 PUS7Q96PZ0 661 aaKnown RBP13.54□□□□□ -0.24
APOC1-204ENST00000589078 PRDM11Q9NQV5 511 aa13.54□□□□□ -0.24
APOC1-204ENST00000589078 CABP1Q9NZU7 370 aa13.54□□□□□ -0.24
APOC1-204ENST00000589078 ACEP12821 1306 aa13.54□□□□□ -0.24
APOC1-204ENST00000589078 CAMTA1Q9Y6Y1 1673 aa13.53□□□□□ -0.24
APOC1-204ENST00000589078 ITSN1Q15811 1721 aa13.53□□□□□ -0.24
APOC1-204ENST00000589078 POLR3AO14802 1390 aaPredicted RBP13.53□□□□□ -0.24
APOC1-204ENST00000589078 KIAA0232Q92628 1395 aa13.53□□□□□ -0.24
APOC1-204ENST00000589078 EIF4G2P78344 907 aaKnown RBP eCLIP13.52□□□□□ -0.25
APOC1-204ENST00000589078 TESK2Q96S53 571 aa13.52□□□□□ -0.25
APOC1-204ENST00000589078 BRD4O60885 1362 aaPredicted RBP13.51□□□□□ -0.25
APOC1-204ENST00000589078 CHRNA2Q15822 529 aa13.51□□□□□ -0.25
APOC1-204ENST00000589078 ZNF692Q9BU19 519 aaPredicted RBP13.51□□□□□ -0.25
APOC1-204ENST00000589078 STRN4Q9NRL3 753 aa13.51□□□□□ -0.25
APOC1-204ENST00000589078 UTRNP46939 3433 aa13.51□□□□□ -0.25
APOC1-204ENST00000589078 TMC1Q8TDI8 760 aa13.5□□□□□ -0.25
APOC1-204ENST00000589078 PPP1R1BQ9UD71 204 aaPredicted RBP13.5□□□□□ -0.25
APOC1-204ENST00000589078 NINLQ9Y2I6 1382 aa13.49□□□□□ -0.25
APOC1-204ENST00000589078 NBPF14Q5TI25 921 aa13.49□□□□□ -0.25
APOC1-204ENST00000589078 USP35Q9P2H5 1018 aa13.49□□□□□ -0.25
APOC1-204ENST00000589078 NRKQ7Z2Y5 1582 aa13.49□□□□□ -0.25
APOC1-204ENST00000589078 SSH2Q76I76 1423 aa13.48□□□□□ -0.25
APOC1-204ENST00000589078 RGPD3A6NKT7 1758 aaPredicted RBP13.48□□□□□ -0.25
APOC1-204ENST00000589078 RGPD4Q7Z3J3 1758 aa13.48□□□□□ -0.25
APOC1-204ENST00000589078 PARP4Q9UKK3 1724 aaKnown RBP13.48□□□□□ -0.25
APOC1-204ENST00000589078 HDGFL2Q7Z4V5 671 aaPredicted RBP13.48□□□□□ -0.25
APOC1-204ENST00000589078 SPON1Q9HCB6 807 aa13.48□□□□□ -0.25
APOC1-204ENST00000589078 TERF2IPQ9NYB0 399 aa13.48□□□□□ -0.25
APOC1-204ENST00000589078 CASZ1Q86V15 1759 aa13.48□□□□□ -0.25
APOC1-204ENST00000589078 TOPAZ1Q8N9V7 1692 aa13.47□□□□□ -0.25
APOC1-204ENST00000589078 LMO7Q8WWI1 1683 aa13.47□□□□□ -0.25
APOC1-204ENST00000589078 PDE3BQ13370 1112 aa13.47□□□□□ -0.25
APOC1-204ENST00000589078 ABTB2Q8N961 1025 aa13.47□□□□□ -0.25
APOC1-204ENST00000589078 DCAF8L1A6NGE4 600 aa13.46□□□□□ -0.25
APOC1-204ENST00000589078 ZC3H6P61129 1189 aaKnown RBP13.46□□□□□ -0.25
APOC1-204ENST00000589078 USP6P35125 1406 aa13.46□□□□□ -0.26
APOC1-204ENST00000589078 KTN1Q86UP2 1357 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms