RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 EDC4Q6P2E9 1401 aaKnown RBP27.62■■■□□ 2.01
DNMT1-216ENST00000588952 COL16A1Q07092 1604 aaPredicted RBP27.62■■■□□ 2.01
DNMT1-216ENST00000588952 TTC21BQ7Z4L5 1316 aa27.59■■■□□ 2.01
DNMT1-216ENST00000588952 SBNO1A3KN83 1393 aa27.58■■■□□ 2.01
DNMT1-216ENST00000588952 ALS2Q96Q42 1657 aa27.57■■■□□ 2
DNMT1-216ENST00000588952 PER1O15534 1290 aaPredicted RBP27.57■■■□□ 2
DNMT1-216ENST00000588952 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.57■■■□□ 2
DNMT1-216ENST00000588952 PIK3C2AO00443 1686 aa27.56■■■□□ 2
DNMT1-216ENST00000588952 BRD4O60885 1362 aaPredicted RBP27.56■■■□□ 2
DNMT1-216ENST00000588952 PAK3O75914 559 aaPredicted RBP27.55■■■□□ 2
DNMT1-216ENST00000588952 FBXO41Q8TF61 875 aa27.55■■■□□ 2
DNMT1-216ENST00000588952 TNS3Q68CZ2 1445 aa27.55■■■□□ 2
DNMT1-216ENST00000588952 SPATA31A3Q5VYP0 1347 aa27.54■■■□□ 2
DNMT1-216ENST00000588952 HSPA1LP34931 641 aa27.53■■■□□ 2
DNMT1-216ENST00000588952 NME9Q86XW9 330 aa27.53■■■□□ 2
DNMT1-216ENST00000588952 ZRANB1Q9UGI0 708 aa27.52■■■□□ 2
DNMT1-216ENST00000588952 KIF20BQ96Q89 1820 aa27.51■■□□□ 1.99
DNMT1-216ENST00000588952 TTC21AQ8NDW8 1320 aa27.51■■□□□ 1.99
DNMT1-216ENST00000588952 MARF1Q9Y4F3 1742 aaKnown RBP27.5■■□□□ 1.99
DNMT1-216ENST00000588952 AMER1Q5JTC6 1135 aaPredicted RBP27.49■■□□□ 1.99
DNMT1-216ENST00000588952 NUTM2GQ5VZR2 741 aa27.49■■□□□ 1.99
DNMT1-216ENST00000588952 KNSTRNQ9Y448 316 aa27.49■■□□□ 1.99
DNMT1-216ENST00000588952 FYB1O15117 783 aa27.48■■□□□ 1.99
DNMT1-216ENST00000588952 LMOD2Q6P5Q4 547 aa27.47■■□□□ 1.99
DNMT1-216ENST00000588952 ABTB2Q8N961 1025 aa27.47■■□□□ 1.99
DNMT1-216ENST00000588952 CGNL1Q0VF96 1302 aa27.46■■□□□ 1.99
DNMT1-216ENST00000588952 LRRC59Q96AG4 307 aaKnown RBP27.46■■□□□ 1.99
DNMT1-216ENST00000588952 GGNBP2Q9H3C7 697 aa27.46■■□□□ 1.99
DNMT1-216ENST00000588952 PNPLA6Q8IY17 1366 aa27.46■■□□□ 1.99
DNMT1-216ENST00000588952 USP54Q70EL1 1684 aa27.46■■□□□ 1.99
DNMT1-216ENST00000588952 OVOS2A0A0J9YW53 1432 aa27.45■■□□□ 1.98
DNMT1-216ENST00000588952 OVOS2Q6IE36 1432 aa27.45■■□□□ 1.98
DNMT1-216ENST00000588952 ARHGEF10O15013 1369 aa27.45■■□□□ 1.98
DNMT1-216ENST00000588952 USP31Q70CQ4 1352 aa27.45■■□□□ 1.98
DNMT1-216ENST00000588952 MED1Q15648 1581 aaPredicted RBP27.43■■□□□ 1.98
DNMT1-216ENST00000588952 CRYBG1Q9Y4K1 1723 aa27.43■■□□□ 1.98
DNMT1-216ENST00000588952 COL22A1Q8NFW1 1626 aaPredicted RBP27.42■■□□□ 1.98
DNMT1-216ENST00000588952 ANKRD26Q9UPS8 1709 aa27.42■■□□□ 1.98
DNMT1-216ENST00000588952 SHPRHQ149N8 1683 aa27.41■■□□□ 1.98
DNMT1-216ENST00000588952 PLEKHG5O94827 1062 aa27.41■■□□□ 1.98
DNMT1-216ENST00000588952 NLRP6P59044 892 aa27.41■■□□□ 1.98
DNMT1-216ENST00000588952 NPC1L1Q9UHC9 1359 aa27.4■■□□□ 1.98
DNMT1-216ENST00000588952 CNGB1Q14028 1251 aaPredicted RBP27.4■■□□□ 1.98
DNMT1-216ENST00000588952 CC2D1BQ5T0F9 858 aaKnown RBP27.4■■□□□ 1.98
DNMT1-216ENST00000588952 USP19O94966 1318 aa27.4■■□□□ 1.98
DNMT1-216ENST00000588952 ABCA3Q99758 1704 aa27.39■■□□□ 1.98
DNMT1-216ENST00000588952 NSD2O96028 1365 aa27.39■■□□□ 1.98
DNMT1-216ENST00000588952 PHRF1Q9P1Y6 1649 aaKnown RBP27.39■■□□□ 1.98
DNMT1-216ENST00000588952 JCADQ9P266 1359 aa27.38■■□□□ 1.97
DNMT1-216ENST00000588952 SLIT3O75094 1523 aa27.38■■□□□ 1.97
DNMT1-216ENST00000588952 CABLES1Q8TDN4 633 aa27.38■■□□□ 1.97
DNMT1-216ENST00000588952 NLRP13Q86W25 1043 aa27.37■■□□□ 1.97
DNMT1-216ENST00000588952 COG3Q96JB2 828 aa27.36■■□□□ 1.97
DNMT1-216ENST00000588952 NFAT5O94916 1531 aa27.33■■□□□ 1.97
DNMT1-216ENST00000588952 FBLN1P23142 703 aa27.32■■□□□ 1.96
DNMT1-216ENST00000588952 SOX12O15370 315 aa27.31■■□□□ 1.96
DNMT1-216ENST00000588952 MORC1Q86VD1 984 aa27.31■■□□□ 1.96
DNMT1-216ENST00000588952 GCP02774 474 aa27.29■■□□□ 1.96
DNMT1-216ENST00000588952 PARD3Q8TEW0 1356 aa27.29■■□□□ 1.96
DNMT1-216ENST00000588952 TNNT2P45379 298 aaPredicted RBP27.28■■□□□ 1.96
DNMT1-216ENST00000588952 LRP6O75581 1613 aa27.27■■□□□ 1.96
DNMT1-216ENST00000588952 NUTM2BA6NNL0 878 aaPredicted RBP27.25■■□□□ 1.95
DNMT1-216ENST00000588952 NUTM2EB1AL46 878 aaPredicted RBP27.25■■□□□ 1.95
DNMT1-216ENST00000588952 ILDR1Q86SU0 546 aaPredicted RBP27.25■■□□□ 1.95
DNMT1-216ENST00000588952 NUTM2AQ8IVF1 878 aaPredicted RBP27.25■■□□□ 1.95
DNMT1-216ENST00000588952 DIEXFQ68CQ4 756 aaKnown RBP27.24■■□□□ 1.95
DNMT1-216ENST00000588952 SPATA31A6Q5VVP1 1343 aa27.23■■□□□ 1.95
DNMT1-216ENST00000588952 ZC3H6P61129 1189 aaKnown RBP27.23■■□□□ 1.95
DNMT1-216ENST00000588952 KCNH5Q8NCM2 988 aa27.23■■□□□ 1.95
DNMT1-216ENST00000588952 PRKRIP1Q9H875 184 aaPredicted RBP27.23■■□□□ 1.95
DNMT1-216ENST00000588952 AATKQ6ZMQ8 1374 aa27.22■■□□□ 1.95
DNMT1-216ENST00000588952 HAP1P54257 671 aaPredicted RBP27.22■■□□□ 1.95
DNMT1-216ENST00000588952 RRS1Q15050 365 aaKnown RBP27.22■■□□□ 1.95
DNMT1-216ENST00000588952 KIAA0232Q92628 1395 aa27.21■■□□□ 1.95
DNMT1-216ENST00000588952 LTN1O94822 1766 aa27.2■■□□□ 1.95
DNMT1-216ENST00000588952 PEAK1Q9H792 1746 aa27.2■■□□□ 1.94
DNMT1-216ENST00000588952 CPDO75976 1380 aa27.2■■□□□ 1.94
DNMT1-216ENST00000588952 MAP3K19Q56UN5 1328 aa27.19■■□□□ 1.94
DNMT1-216ENST00000588952 RALBP1Q15311 655 aa27.19■■□□□ 1.94
DNMT1-216ENST00000588952 ARHGEF25Q86VW2 580 aa27.19■■□□□ 1.94
DNMT1-216ENST00000588952 EMILIN1Q9Y6C2 1016 aa27.19■■□□□ 1.94
DNMT1-216ENST00000588952 MAP2P11137 1827 aaKnown RBP27.18■■□□□ 1.94
DNMT1-216ENST00000588952 ADAMTS2O95450 1211 aa27.18■■□□□ 1.94
DNMT1-216ENST00000588952 POLKQ9UBT6 870 aa27.18■■□□□ 1.94
DNMT1-216ENST00000588952 PPP2R1AP30153 589 aa27.17■■□□□ 1.94
DNMT1-216ENST00000588952 SMG6Q86US8 1419 aaKnown RBP27.16■■□□□ 1.94
DNMT1-216ENST00000588952 ZBTB7CA1YPR0 619 aa27.16■■□□□ 1.94
DNMT1-216ENST00000588952 ANP32CO43423 234 aa27.16■■□□□ 1.94
DNMT1-216ENST00000588952 CHRNA2Q15822 529 aa27.16■■□□□ 1.94
DNMT1-216ENST00000588952 COL18A1P39060 1754 aa27.16■■□□□ 1.94
DNMT1-216ENST00000588952 FAM83GA6ND36 823 aa27.13■■□□□ 1.93
DNMT1-216ENST00000588952 PRDM11Q9NQV5 511 aa27.13■■□□□ 1.93
DNMT1-216ENST00000588952 LMO7Q8WWI1 1683 aa27.13■■□□□ 1.93
DNMT1-216ENST00000588952 MTHFSP49914 203 aa27.11■■□□□ 1.93
DNMT1-216ENST00000588952 COL14A1Q05707 1796 aaKnown RBP27.11■■□□□ 1.93
DNMT1-216ENST00000588952 MYBBP1AQ9BQG0 1328 aaKnown RBP27.11■■□□□ 1.93
DNMT1-216ENST00000588952 PPM1GO15355 546 aaPredicted RBP27.1■■□□□ 1.93
DNMT1-216ENST00000588952 RTL1A6NKG5 1358 aa27.09■■□□□ 1.93
DNMT1-216ENST00000588952 PLCH1Q4KWH8 1693 aa27.09■■□□□ 1.93
DNMT1-216ENST00000588952 CDK12Q9NYV4 1490 aaPredicted RBP27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms