RNA–Protein interactions for RNA: ENST00000588671.2

PCSK4-208, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 4

Gene PCSK4, Length 720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-208ENST00000588671 ACEP12821 1306 aa23.34■■□□□ 1.33
PCSK4-208ENST00000588671 TRPM1Q7Z4N2 1603 aa23.34■■□□□ 1.33
PCSK4-208ENST00000588671 CABLES1Q8TDN4 633 aa23.34■■□□□ 1.33
PCSK4-208ENST00000588671 CABP2Q9NPB3 220 aa23.34■■□□□ 1.33
PCSK4-208ENST00000588671 ALS2Q96Q42 1657 aa23.34■■□□□ 1.33
PCSK4-208ENST00000588671 POLR3AO14802 1390 aaPredicted RBP23.32■■□□□ 1.32
PCSK4-208ENST00000588671 BRD4O60885 1362 aaPredicted RBP23.32■■□□□ 1.32
PCSK4-208ENST00000588671 PLEKHG5O94827 1062 aa23.32■■□□□ 1.32
PCSK4-208ENST00000588671 UNC5CLQ8IV45 518 aa23.31■■□□□ 1.32
PCSK4-208ENST00000588671 PLCH1Q4KWH8 1693 aa23.3■■□□□ 1.32
PCSK4-208ENST00000588671 ZNF692Q9BU19 519 aaPredicted RBP23.3■■□□□ 1.32
PCSK4-208ENST00000588671 PPIP5K1Q6PFW1 1433 aa23.3■■□□□ 1.32
PCSK4-208ENST00000588671 GJD4Q96KN9 370 aaPredicted RBP23.29■■□□□ 1.32
PCSK4-208ENST00000588671 TOPAZ1Q8N9V7 1692 aa23.28■■□□□ 1.32
PCSK4-208ENST00000588671 GLI3P10071 1580 aa23.28■■□□□ 1.32
PCSK4-208ENST00000588671 CABP1Q9NZU7 370 aa23.28■■□□□ 1.32
PCSK4-208ENST00000588671 NWD2Q9ULI1 1742 aa23.28■■□□□ 1.32
PCSK4-208ENST00000588671 ABTB2Q8N961 1025 aa23.27■■□□□ 1.32
PCSK4-208ENST00000588671 RALGAPBQ86X10 1494 aa23.27■■□□□ 1.32
PCSK4-208ENST00000588671 ATAD2Q6PL18 1390 aa23.27■■□□□ 1.31
PCSK4-208ENST00000588671 CRYBG1Q9Y4K1 1723 aa23.26■■□□□ 1.31
PCSK4-208ENST00000588671 NLRP13Q86W25 1043 aa23.26■■□□□ 1.31
PCSK4-208ENST00000588671 SBNO2Q9Y2G9 1366 aa23.26■■□□□ 1.31
PCSK4-208ENST00000588671 QRICH2Q9H0J4 1663 aa23.25■■□□□ 1.31
PCSK4-208ENST00000588671 FAM83GA6ND36 823 aa23.23■■□□□ 1.31
PCSK4-208ENST00000588671 CCDC9Q9Y3X0 531 aaKnown RBP23.23■■□□□ 1.31
PCSK4-208ENST00000588671 CCER1Q8TC90 406 aaPredicted RBP23.22■■□□□ 1.31
PCSK4-208ENST00000588671 PUS7Q96PZ0 661 aaKnown RBP23.22■■□□□ 1.31
PCSK4-208ENST00000588671 PRDM11Q9NQV5 511 aa23.22■■□□□ 1.31
PCSK4-208ENST00000588671 NRAPQ86VF7 1730 aa23.22■■□□□ 1.31
PCSK4-208ENST00000588671 VPS72Q15906 364 aa23.21■■□□□ 1.31
PCSK4-208ENST00000588671 COL14A1Q05707 1796 aaKnown RBP23.2■■□□□ 1.3
PCSK4-208ENST00000588671 NUTM2GQ5VZR2 741 aa23.18■■□□□ 1.3
PCSK4-208ENST00000588671 BTG4Q9NY30 223 aa23.18■■□□□ 1.3
PCSK4-208ENST00000588671 PHRF1Q9P1Y6 1649 aaKnown RBP23.17■■□□□ 1.3
PCSK4-208ENST00000588671 BRWD3Q6RI45 1802 aa23.17■■□□□ 1.3
PCSK4-208ENST00000588671 NLRP6P59044 892 aa23.16■■□□□ 1.3
PCSK4-208ENST00000588671 HDGFL2Q7Z4V5 671 aaPredicted RBP23.16■■□□□ 1.3
PCSK4-208ENST00000588671 TMC1Q8TDI8 760 aa23.15■■□□□ 1.3
PCSK4-208ENST00000588671 TERF2IPQ9NYB0 399 aa23.15■■□□□ 1.3
PCSK4-208ENST00000588671 USP6P35125 1406 aa23.15■■□□□ 1.3
PCSK4-208ENST00000588671 TTC21AQ8NDW8 1320 aa23.14■■□□□ 1.3
PCSK4-208ENST00000588671 ST20-MTHFSA0A0A6YYL1 179 aa23.14■■□□□ 1.29
PCSK4-208ENST00000588671 CDCA8Q53HL2 280 aa23.14■■□□□ 1.29
PCSK4-208ENST00000588671 EVA1CP58658 441 aa23.13■■□□□ 1.29
PCSK4-208ENST00000588671 ZC3H6P61129 1189 aaKnown RBP23.13■■□□□ 1.29
PCSK4-208ENST00000588671 GCP02774 474 aa23.12■■□□□ 1.29
PCSK4-208ENST00000588671 SEPT12Q8IYM1 358 aa23.12■■□□□ 1.29
PCSK4-208ENST00000588671 TMF1P82094 1093 aa23.11■■□□□ 1.29
PCSK4-208ENST00000588671 KCNH5Q8NCM2 988 aa23.11■■□□□ 1.29
PCSK4-208ENST00000588671 KTN1Q86UP2 1357 aaKnown RBP23.11■■□□□ 1.29
PCSK4-208ENST00000588671 KIAA0232Q92628 1395 aa23.11■■□□□ 1.29
PCSK4-208ENST00000588671 USP19O94966 1318 aa23.1■■□□□ 1.29
PCSK4-208ENST00000588671 ONECUT3O60422 494 aaPredicted RBP23.1■■□□□ 1.29
PCSK4-208ENST00000588671 TTC21BQ7Z4L5 1316 aa23.09■■□□□ 1.29
PCSK4-208ENST00000588671 A0A0G2JS52 829 aa23.09■■□□□ 1.29
PCSK4-208ENST00000588671 MYT1Q01538 1121 aa23.09■■□□□ 1.29
PCSK4-208ENST00000588671 CCDC125Q86Z20 511 aa23.09■■□□□ 1.29
PCSK4-208ENST00000588671 NINLQ9Y2I6 1382 aa23.09■■□□□ 1.29
PCSK4-208ENST00000588671 EP400Q96L91 3159 aa23.09■■□□□ 1.29
PCSK4-208ENST00000588671 CPDO75976 1380 aa23.08■■□□□ 1.29
PCSK4-208ENST00000588671 NRKQ7Z2Y5 1582 aa23.07■■□□□ 1.28
PCSK4-208ENST00000588671 CHRNA2Q15822 529 aa23.07■■□□□ 1.28
PCSK4-208ENST00000588671 USP47Q96K76 1375 aa23.06■■□□□ 1.28
PCSK4-208ENST00000588671 CPSF1Q10570 1443 aaKnown RBP23.06■■□□□ 1.28
PCSK4-208ENST00000588671 TESK2Q96S53 571 aa23.05■■□□□ 1.28
PCSK4-208ENST00000588671 STRN4Q9NRL3 753 aa23.05■■□□□ 1.28
PCSK4-208ENST00000588671 FAM98CQ17RN3 349 aaKnown RBP23.04■■□□□ 1.28
PCSK4-208ENST00000588671 SLC12A5Q9H2X9 1139 aa23.04■■□□□ 1.28
PCSK4-208ENST00000588671 SSH2Q76I76 1423 aa23.04■■□□□ 1.28
PCSK4-208ENST00000588671 SPATA31A5Q5VU36 1347 aa23.04■■□□□ 1.28
PCSK4-208ENST00000588671 SPATA31A7Q8IWB4 1347 aa23.04■■□□□ 1.28
PCSK4-208ENST00000588671 KRT27Q7Z3Y8 459 aa23.03■■□□□ 1.28
PCSK4-208ENST00000588671 BLMP54132 1417 aaPredicted RBP23.02■■□□□ 1.28
PCSK4-208ENST00000588671 ZBTB7CA1YPR0 619 aa23.01■■□□□ 1.27
PCSK4-208ENST00000588671 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.01■■□□□ 1.27
PCSK4-208ENST00000588671 THSD7AQ9UPZ6 1657 aa23■■□□□ 1.27
PCSK4-208ENST00000588671 SF3B2Q13435 895 aaKnown RBP23■■□□□ 1.27
PCSK4-208ENST00000588671 LMO7Q8WWI1 1683 aa22.99■■□□□ 1.27
PCSK4-208ENST00000588671 AATKQ6ZMQ8 1374 aa22.99■■□□□ 1.27
PCSK4-208ENST00000588671 THRAP3Q9Y2W1 955 aaKnown RBP22.98■■□□□ 1.27
PCSK4-208ENST00000588671 SPATA31A1Q5TZJ5 1347 aa22.98■■□□□ 1.27
PCSK4-208ENST00000588671 AKAP12Q02952 1782 aa22.98■■□□□ 1.27
PCSK4-208ENST00000588671 EDC4Q6P2E9 1401 aaKnown RBP22.98■■□□□ 1.27
PCSK4-208ENST00000588671 PIK3C2AO00443 1686 aa22.97■■□□□ 1.27
PCSK4-208ENST00000588671 CAMTA1Q9Y6Y1 1673 aa22.97■■□□□ 1.27
PCSK4-208ENST00000588671 TCP11L2Q8N4U5 519 aa22.96■■□□□ 1.27
PCSK4-208ENST00000588671 SLIT3O75094 1523 aa22.95■■□□□ 1.26
PCSK4-208ENST00000588671 BARGINQ6ZT62 677 aa22.95■■□□□ 1.26
PCSK4-208ENST00000588671 USP31Q70CQ4 1352 aa22.95■■□□□ 1.26
PCSK4-208ENST00000588671 EIF4G2P78344 907 aaKnown RBP eCLIP22.94■■□□□ 1.26
PCSK4-208ENST00000588671 ARHGEF25Q86VW2 580 aa22.94■■□□□ 1.26
PCSK4-208ENST00000588671 USP35Q9P2H5 1018 aa22.94■■□□□ 1.26
PCSK4-208ENST00000588671 SOX12O15370 315 aa22.93■■□□□ 1.26
PCSK4-208ENST00000588671 A0A1W2PP64 1363 aa22.92■■□□□ 1.26
PCSK4-208ENST00000588671 LARP1Q6PKG0 1096 aaKnown RBP22.92■■□□□ 1.26
PCSK4-208ENST00000588671 DEFB132Q7Z7B7 95 aa22.92■■□□□ 1.26
PCSK4-208ENST00000588671 C11orf95C9JLR9 678 aaPredicted RBP22.91■■□□□ 1.26
PCSK4-208ENST00000588671 CSB-PGBD3P0DP91 1061 aa22.91■■□□□ 1.26
PCSK4-208ENST00000588671 PDE3BQ13370 1112 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms