RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 EVC2Q86UK5 1308 aa12.57□□□□□ -0.4
SDF2-207ENST00000588472 CABP1Q9NZU7 370 aa12.56□□□□□ -0.4
SDF2-207ENST00000588472 ITSN1Q15811 1721 aa12.56□□□□□ -0.4
SDF2-207ENST00000588472 PPIP5K1Q6PFW1 1433 aa12.55□□□□□ -0.4
SDF2-207ENST00000588472 PLEKHG3A1L390 1219 aa12.55□□□□□ -0.4
SDF2-207ENST00000588472 GJD4Q96KN9 370 aaPredicted RBP12.55□□□□□ -0.4
SDF2-207ENST00000588472 CCDC9Q9Y3X0 531 aaKnown RBP12.55□□□□□ -0.4
SDF2-207ENST00000588472 FAM83GA6ND36 823 aa12.54□□□□□ -0.4
SDF2-207ENST00000588472 MSH5O43196 834 aa12.54□□□□□ -0.4
SDF2-207ENST00000588472 ABTB2Q8N961 1025 aa12.54□□□□□ -0.4
SDF2-207ENST00000588472 TRPM3Q9HCF6 1732 aaPredicted RBP12.54□□□□□ -0.4
SDF2-207ENST00000588472 MARF1Q9Y4F3 1742 aaKnown RBP12.54□□□□□ -0.4
SDF2-207ENST00000588472 BCL9LQ86UU0 1499 aa12.53□□□□□ -0.4
SDF2-207ENST00000588472 SF3B2Q13435 895 aaKnown RBP12.53□□□□□ -0.4
SDF2-207ENST00000588472 UNC5CLQ8IV45 518 aa12.53□□□□□ -0.4
SDF2-207ENST00000588472 CCER1Q8TC90 406 aaPredicted RBP12.53□□□□□ -0.4
SDF2-207ENST00000588472 POLR3AO14802 1390 aaPredicted RBP12.52□□□□□ -0.41
SDF2-207ENST00000588472 BLMP54132 1417 aaPredicted RBP12.52□□□□□ -0.41
SDF2-207ENST00000588472 ZC3H6P61129 1189 aaKnown RBP12.51□□□□□ -0.41
SDF2-207ENST00000588472 TMC1Q8TDI8 760 aa12.51□□□□□ -0.41
SDF2-207ENST00000588472 BTG4Q9NY30 223 aa12.51□□□□□ -0.41
SDF2-207ENST00000588472 RALGAPBQ86X10 1494 aa12.51□□□□□ -0.41
SDF2-207ENST00000588472 TOPAZ1Q8N9V7 1692 aa12.51□□□□□ -0.41
SDF2-207ENST00000588472 ALS2Q96Q42 1657 aa12.51□□□□□ -0.41
SDF2-207ENST00000588472 ZBTB7CA1YPR0 619 aa12.5□□□□□ -0.41
SDF2-207ENST00000588472 CHRNA2Q15822 529 aa12.5□□□□□ -0.41
SDF2-207ENST00000588472 PRDM11Q9NQV5 511 aa12.5□□□□□ -0.41
SDF2-207ENST00000588472 ABCA3Q99758 1704 aa12.49□□□□□ -0.41
SDF2-207ENST00000588472 DEFB132Q7Z7B7 95 aa12.49□□□□□ -0.41
SDF2-207ENST00000588472 SLIT2O94813 1529 aa12.48□□□□□ -0.41
SDF2-207ENST00000588472 ST20-MTHFSA0A0A6YYL1 179 aa12.48□□□□□ -0.41
SDF2-207ENST00000588472 A0A0G2JS52 829 aa12.48□□□□□ -0.41
SDF2-207ENST00000588472 NLRP6P59044 892 aa12.48□□□□□ -0.41
SDF2-207ENST00000588472 MYT1Q01538 1121 aa12.48□□□□□ -0.41
SDF2-207ENST00000588472 EP400Q96L91 3159 aa12.47□□□□□ -0.41
SDF2-207ENST00000588472 KIAA0232Q92628 1395 aa12.47□□□□□ -0.41
SDF2-207ENST00000588472 NLRP13Q86W25 1043 aa12.47□□□□□ -0.41
SDF2-207ENST00000588472 STRN4Q9NRL3 753 aa12.47□□□□□ -0.41
SDF2-207ENST00000588472 PLCH1Q4KWH8 1693 aa12.46□□□□□ -0.41
SDF2-207ENST00000588472 SOX12O15370 315 aa12.46□□□□□ -0.41
SDF2-207ENST00000588472 VPS72Q15906 364 aa12.46□□□□□ -0.41
SDF2-207ENST00000588472 USP6P35125 1406 aa12.45□□□□□ -0.42
SDF2-207ENST00000588472 EVA1CP58658 441 aa12.45□□□□□ -0.42
SDF2-207ENST00000588472 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.45□□□□□ -0.42
SDF2-207ENST00000588472 SEPT12Q8IYM1 358 aa12.45□□□□□ -0.42
SDF2-207ENST00000588472 ZNF692Q9BU19 519 aaPredicted RBP12.45□□□□□ -0.42
SDF2-207ENST00000588472 SLC12A5Q9H2X9 1139 aa12.45□□□□□ -0.42
SDF2-207ENST00000588472 KTN1Q86UP2 1357 aaKnown RBP12.44□□□□□ -0.42
SDF2-207ENST00000588472 CLSPNQ9HAW4 1339 aa12.44□□□□□ -0.42
SDF2-207ENST00000588472 GCP02774 474 aa12.44□□□□□ -0.42
SDF2-207ENST00000588472 FAM98CQ17RN3 349 aaKnown RBP12.44□□□□□ -0.42
SDF2-207ENST00000588472 COL14A1Q05707 1796 aaKnown RBP12.43□□□□□ -0.42
SDF2-207ENST00000588472 TTC21BQ7Z4L5 1316 aa12.43□□□□□ -0.42
SDF2-207ENST00000588472 USP35Q9P2H5 1018 aa12.43□□□□□ -0.42
SDF2-207ENST00000588472 PHRF1Q9P1Y6 1649 aaKnown RBP12.43□□□□□ -0.42
SDF2-207ENST00000588472 GLI3P10071 1580 aa12.43□□□□□ -0.42
SDF2-207ENST00000588472 USP47Q96K76 1375 aa12.43□□□□□ -0.42
SDF2-207ENST00000588472 SBNO2Q9Y2G9 1366 aa12.43□□□□□ -0.42
SDF2-207ENST00000588472 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.42□□□□□ -0.42
SDF2-207ENST00000588472 NWD2Q9ULI1 1742 aa12.42□□□□□ -0.42
SDF2-207ENST00000588472 CRYBG1Q9Y4K1 1723 aa12.42□□□□□ -0.42
SDF2-207ENST00000588472 BAG6P46379 1132 aa12.42□□□□□ -0.42
SDF2-207ENST00000588472 KRT27Q7Z3Y8 459 aa12.42□□□□□ -0.42
SDF2-207ENST00000588472 HDGFL2Q7Z4V5 671 aaPredicted RBP12.42□□□□□ -0.42
SDF2-207ENST00000588472 TESK2Q96S53 571 aa12.42□□□□□ -0.42
SDF2-207ENST00000588472 TIMELESSQ9UNS1 1208 aa12.42□□□□□ -0.42
SDF2-207ENST00000588472 USP19O94966 1318 aa12.41□□□□□ -0.42
SDF2-207ENST00000588472 LRP5O75197 1615 aa12.41□□□□□ -0.42
SDF2-207ENST00000588472 BRD4O60885 1362 aaPredicted RBP12.41□□□□□ -0.42
SDF2-207ENST00000588472 PSDA5PKW4 1024 aaPredicted RBP12.4□□□□□ -0.42
SDF2-207ENST00000588472 TMF1P82094 1093 aa12.4□□□□□ -0.42
SDF2-207ENST00000588472 TERF2IPQ9NYB0 399 aa12.4□□□□□ -0.42
SDF2-207ENST00000588472 NRAPQ86VF7 1730 aa12.4□□□□□ -0.43
SDF2-207ENST00000588472 SPATA31A5Q5VU36 1347 aa12.39□□□□□ -0.43
SDF2-207ENST00000588472 SPATA31A7Q8IWB4 1347 aa12.39□□□□□ -0.43
SDF2-207ENST00000588472 TTC21AQ8NDW8 1320 aa12.39□□□□□ -0.43
SDF2-207ENST00000588472 NRKQ7Z2Y5 1582 aa12.39□□□□□ -0.43
SDF2-207ENST00000588472 CPSF1Q10570 1443 aaKnown RBP12.39□□□□□ -0.43
SDF2-207ENST00000588472 SSH2Q76I76 1423 aa12.39□□□□□ -0.43
SDF2-207ENST00000588472 AKAP12Q02952 1782 aa12.39□□□□□ -0.43
SDF2-207ENST00000588472 ONECUT3O60422 494 aaPredicted RBP12.39□□□□□ -0.43
SDF2-207ENST00000588472 LARP1Q6PKG0 1096 aaKnown RBP12.39□□□□□ -0.43
SDF2-207ENST00000588472 NME9Q86XW9 330 aa12.39□□□□□ -0.43
SDF2-207ENST00000588472 POLR3GLQ9BT43 218 aa12.39□□□□□ -0.43
SDF2-207ENST00000588472 PIK3C2AO00443 1686 aa12.38□□□□□ -0.43
SDF2-207ENST00000588472 SLC24A1O60721 1099 aa12.38□□□□□ -0.43
SDF2-207ENST00000588472 FAM182BQ5T319 152 aa12.37□□□□□ -0.43
SDF2-207ENST00000588472 CPDO75976 1380 aa12.37□□□□□ -0.43
SDF2-207ENST00000588472 SPATA31A1Q5TZJ5 1347 aa12.37□□□□□ -0.43
SDF2-207ENST00000588472 CAMTA1Q9Y6Y1 1673 aa12.36□□□□□ -0.43
SDF2-207ENST00000588472 CD163L1Q9NR16 1453 aa12.36□□□□□ -0.43
SDF2-207ENST00000588472 A0A1W2PP64 1363 aa12.36□□□□□ -0.43
SDF2-207ENST00000588472 KCNH5Q8NCM2 988 aa12.36□□□□□ -0.43
SDF2-207ENST00000588472 PUS7Q96PZ0 661 aaKnown RBP12.36□□□□□ -0.43
SDF2-207ENST00000588472 BRWD3Q6RI45 1802 aa12.36□□□□□ -0.43
SDF2-207ENST00000588472 AXIN2Q9Y2T1 843 aa12.35□□□□□ -0.43
SDF2-207ENST00000588472 MON2Q7Z3U7 1717 aa12.34□□□□□ -0.43
SDF2-207ENST00000588472 SLIT3O75094 1523 aa12.34□□□□□ -0.43
SDF2-207ENST00000588472 CSB-PGBD3P0DP91 1061 aa12.34□□□□□ -0.43
SDF2-207ENST00000588472 EN1Q05925 392 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms