RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 NGDNQ8NEJ9 315 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-207ENST00000588269 SRPK2P78362 688 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-207ENST00000588269 SEPT12Q8IYM1 358 aa16.66■□□□□ 0.26
PRKCSH-207ENST00000588269 CCDC9Q9Y3X0 531 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-207ENST00000588269 TOPAZ1Q8N9V7 1692 aa16.65■□□□□ 0.26
PRKCSH-207ENST00000588269 NUDT16Q96DE0 195 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-207ENST00000588269 CDK19Q9BWU1 502 aa16.65■□□□□ 0.26
PRKCSH-207ENST00000588269 CARD11Q9BXL7 1154 aa16.65■□□□□ 0.26
PRKCSH-207ENST00000588269 EVC2Q86UK5 1308 aa16.65■□□□□ 0.26
PRKCSH-207ENST00000588269 CCDC61Q9Y6R9 512 aa16.64■□□□□ 0.25
PRKCSH-207ENST00000588269 PRR36Q9H6K5 1346 aa16.64■□□□□ 0.25
PRKCSH-207ENST00000588269 FAM83GA6ND36 823 aa16.63■□□□□ 0.25
PRKCSH-207ENST00000588269 TIMELESSQ9UNS1 1208 aa16.63■□□□□ 0.25
PRKCSH-207ENST00000588269 SBNO2Q9Y2G9 1366 aa16.63■□□□□ 0.25
PRKCSH-207ENST00000588269 BLMP54132 1417 aaPredicted RBP16.62■□□□□ 0.25
PRKCSH-207ENST00000588269 TRPM3Q9HCF6 1732 aaPredicted RBP16.62■□□□□ 0.25
PRKCSH-207ENST00000588269 VPS72Q15906 364 aa16.62■□□□□ 0.25
PRKCSH-207ENST00000588269 NWD2Q9ULI1 1742 aa16.62■□□□□ 0.25
PRKCSH-207ENST00000588269 CCDC125Q86Z20 511 aa16.61■□□□□ 0.25
PRKCSH-207ENST00000588269 NRAPQ86VF7 1730 aa16.61■□□□□ 0.25
PRKCSH-207ENST00000588269 A0A0G2JS52 829 aa16.6■□□□□ 0.25
PRKCSH-207ENST00000588269 SLC24A1O60721 1099 aa16.6■□□□□ 0.25
PRKCSH-207ENST00000588269 MYT1Q01538 1121 aa16.6■□□□□ 0.25
PRKCSH-207ENST00000588269 NBPF8Q3BBV2 869 aa16.6■□□□□ 0.25
PRKCSH-207ENST00000588269 FAM182BQ5T319 152 aa16.6■□□□□ 0.25
PRKCSH-207ENST00000588269 POLR3AO14802 1390 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-207ENST00000588269 PPIP5K1Q6PFW1 1433 aa16.6■□□□□ 0.25
PRKCSH-207ENST00000588269 BRD4O60885 1362 aaPredicted RBP16.59■□□□□ 0.25
PRKCSH-207ENST00000588269 SRCAPQ6ZRS2 3230 aa16.59■□□□□ 0.25
PRKCSH-207ENST00000588269 PAK3O75914 559 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-207ENST00000588269 FAM98CQ17RN3 349 aaKnown RBP16.58■□□□□ 0.24
PRKCSH-207ENST00000588269 KRT27Q7Z3Y8 459 aa16.58■□□□□ 0.24
PRKCSH-207ENST00000588269 CCER1Q8TC90 406 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-207ENST00000588269 ALS2Q96Q42 1657 aa16.58■□□□□ 0.24
PRKCSH-207ENST00000588269 PLEKHG3A1L390 1219 aa16.57■□□□□ 0.24
PRKCSH-207ENST00000588269 BTG4Q9NY30 223 aa16.57■□□□□ 0.24
PRKCSH-207ENST00000588269 PSDA5PKW4 1024 aaPredicted RBP16.56■□□□□ 0.24
PRKCSH-207ENST00000588269 CABP2Q9NPB3 220 aa16.56■□□□□ 0.24
PRKCSH-207ENST00000588269 ACEP12821 1306 aa16.55■□□□□ 0.24
PRKCSH-207ENST00000588269 ONECUT3O60422 494 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-207ENST00000588269 SF3B2Q13435 895 aaKnown RBP16.55■□□□□ 0.24
PRKCSH-207ENST00000588269 CRYBG1Q9Y4K1 1723 aa16.55■□□□□ 0.24
PRKCSH-207ENST00000588269 COL14A1Q05707 1796 aaKnown RBP16.52■□□□□ 0.24
PRKCSH-207ENST00000588269 CHRNA2Q15822 529 aa16.51■□□□□ 0.23
PRKCSH-207ENST00000588269 NUTM2GQ5VZR2 741 aa16.51■□□□□ 0.23
PRKCSH-207ENST00000588269 USP6P35125 1406 aa16.51■□□□□ 0.23
PRKCSH-207ENST00000588269 EN1Q05925 392 aaPredicted RBP16.5■□□□□ 0.23
PRKCSH-207ENST00000588269 USP47Q96K76 1375 aa16.5■□□□□ 0.23
PRKCSH-207ENST00000588269 NINLQ9Y2I6 1382 aa16.5■□□□□ 0.23
PRKCSH-207ENST00000588269 ZNF692Q9BU19 519 aaPredicted RBP16.49■□□□□ 0.23
PRKCSH-207ENST00000588269 CABP1Q9NZU7 370 aa16.49■□□□□ 0.23
PRKCSH-207ENST00000588269 SPATA31A5Q5VU36 1347 aa16.48■□□□□ 0.23
PRKCSH-207ENST00000588269 SPATA31A7Q8IWB4 1347 aa16.48■□□□□ 0.23
PRKCSH-207ENST00000588269 ABTB2Q8N961 1025 aa16.48■□□□□ 0.23
PRKCSH-207ENST00000588269 PUS7Q96PZ0 661 aaKnown RBP16.48■□□□□ 0.23
PRKCSH-207ENST00000588269 PRDM11Q9NQV5 511 aa16.48■□□□□ 0.23
PRKCSH-207ENST00000588269 STRN4Q9NRL3 753 aa16.48■□□□□ 0.23
PRKCSH-207ENST00000588269 PHRF1Q9P1Y6 1649 aaKnown RBP16.48■□□□□ 0.23
PRKCSH-207ENST00000588269 THSD7AQ9UPZ6 1657 aa16.47■□□□□ 0.23
PRKCSH-207ENST00000588269 NLRP13Q86W25 1043 aa16.47■□□□□ 0.23
PRKCSH-207ENST00000588269 KIAA0232Q92628 1395 aa16.47■□□□□ 0.23
PRKCSH-207ENST00000588269 TNS1Q9HBL0 1735 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-207ENST00000588269 BAG6P46379 1132 aa16.46■□□□□ 0.23
PRKCSH-207ENST00000588269 ZC3H6P61129 1189 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-207ENST00000588269 CDCA8Q53HL2 280 aa16.46■□□□□ 0.23
PRKCSH-207ENST00000588269 LRP5O75197 1615 aa16.45■□□□□ 0.22
PRKCSH-207ENST00000588269 HDGFL2Q7Z4V5 671 aaPredicted RBP16.45■□□□□ 0.22
PRKCSH-207ENST00000588269 USP35Q9P2H5 1018 aa16.45■□□□□ 0.22
PRKCSH-207ENST00000588269 RGPD1P0DJD0 1748 aa16.45■□□□□ 0.22
PRKCSH-207ENST00000588269 TTC21AQ8NDW8 1320 aa16.45■□□□□ 0.22
PRKCSH-207ENST00000588269 AKAP12Q02952 1782 aa16.44■□□□□ 0.22
PRKCSH-207ENST00000588269 NRKQ7Z2Y5 1582 aa16.44■□□□□ 0.22
PRKCSH-207ENST00000588269 KTN1Q86UP2 1357 aaKnown RBP16.44■□□□□ 0.22
PRKCSH-207ENST00000588269 ST20-MTHFSA0A0A6YYL1 179 aa16.44■□□□□ 0.22
PRKCSH-207ENST00000588269 TMF1P82094 1093 aa16.44■□□□□ 0.22
PRKCSH-207ENST00000588269 TERF2IPQ9NYB0 399 aa16.44■□□□□ 0.22
PRKCSH-207ENST00000588269 USP19O94966 1318 aa16.44■□□□□ 0.22
PRKCSH-207ENST00000588269 R3HDM1Q15032 1099 aaKnown RBP16.43■□□□□ 0.22
PRKCSH-207ENST00000588269 EZH2Q15910 746 aaKnown RBP16.43■□□□□ 0.22
PRKCSH-207ENST00000588269 TMC1Q8TDI8 760 aa16.43■□□□□ 0.22
PRKCSH-207ENST00000588269 CPSF1Q10570 1443 aaKnown RBP16.42■□□□□ 0.22
PRKCSH-207ENST00000588269 SPATA31A1Q5TZJ5 1347 aa16.42■□□□□ 0.22
PRKCSH-207ENST00000588269 MON2Q7Z3U7 1717 aa16.42■□□□□ 0.22
PRKCSH-207ENST00000588269 CPDO75976 1380 aa16.41■□□□□ 0.22
PRKCSH-207ENST00000588269 TRIM37O94972 964 aa16.41■□□□□ 0.22
PRKCSH-207ENST00000588269 SSH2Q76I76 1423 aa16.4■□□□□ 0.22
PRKCSH-207ENST00000588269 NLRP6P59044 892 aa16.4■□□□□ 0.22
PRKCSH-207ENST00000588269 TESK2Q96S53 571 aa16.4■□□□□ 0.22
PRKCSH-207ENST00000588269 PIK3C2AO00443 1686 aa16.4■□□□□ 0.22
PRKCSH-207ENST00000588269 SLIT3O75094 1523 aa16.4■□□□□ 0.22
PRKCSH-207ENST00000588269 EDC4Q6P2E9 1401 aaKnown RBP16.39■□□□□ 0.21
PRKCSH-207ENST00000588269 KCNH5Q8NCM2 988 aa16.39■□□□□ 0.21
PRKCSH-207ENST00000588269 TTC21BQ7Z4L5 1316 aa16.39■□□□□ 0.21
PRKCSH-207ENST00000588269 CAMTA1Q9Y6Y1 1673 aa16.38■□□□□ 0.21
PRKCSH-207ENST00000588269 LARP1Q6PKG0 1096 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-207ENST00000588269 GCP02774 474 aa16.37■□□□□ 0.21
PRKCSH-207ENST00000588269 A0A1W2PP64 1363 aa16.36■□□□□ 0.21
PRKCSH-207ENST00000588269 ZBTB7CA1YPR0 619 aa16.35■□□□□ 0.21
PRKCSH-207ENST00000588269 EVA1CP58658 441 aa16.35■□□□□ 0.21
PRKCSH-207ENST00000588269 CAMKK2Q96RR4 588 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms