RNA–Protein interactions for RNA: ENST00000588019.1

NLE1-204, Transcript of notchless homolog 1, humanhuman

TSL 5

Gene NLE1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-204ENST00000588019 MORC1Q86VD1 984 aa21.96■■□□□ 1.11
NLE1-204ENST00000588019 SSH2Q76I76 1423 aa21.96■■□□□ 1.11
NLE1-204ENST00000588019 PSME1Q06323 249 aa21.95■■□□□ 1.1
NLE1-204ENST00000588019 GGNBP2Q9H3C7 697 aa21.93■■□□□ 1.1
NLE1-204ENST00000588019 NRKQ7Z2Y5 1582 aa21.92■■□□□ 1.1
NLE1-204ENST00000588019 FOXO3O43524 673 aa21.92■■□□□ 1.1
NLE1-204ENST00000588019 NLRP13Q86W25 1043 aa21.91■■□□□ 1.1
NLE1-204ENST00000588019 NME9Q86XW9 330 aa21.91■■□□□ 1.1
NLE1-204ENST00000588019 NPHP3Q7Z494 1330 aa21.9■■□□□ 1.1
NLE1-204ENST00000588019 BRINP3Q76B58 766 aa21.9■■□□□ 1.1
NLE1-204ENST00000588019 COG3Q96JB2 828 aa21.9■■□□□ 1.1
NLE1-204ENST00000588019 PPP2R1AP30153 589 aa21.89■■□□□ 1.09
NLE1-204ENST00000588019 KRT28Q7Z3Y7 464 aa21.89■■□□□ 1.09
NLE1-204ENST00000588019 KIF20BQ96Q89 1820 aa21.89■■□□□ 1.09
NLE1-204ENST00000588019 PAK3O75914 559 aaPredicted RBP21.88■■□□□ 1.09
NLE1-204ENST00000588019 IQSEC2Q5JU85 1478 aa21.87■■□□□ 1.09
NLE1-204ENST00000588019 USP31Q70CQ4 1352 aa21.87■■□□□ 1.09
NLE1-204ENST00000588019 ANKRD26Q9UPS8 1709 aa21.86■■□□□ 1.09
NLE1-204ENST00000588019 SCAF1Q9H7N4 1312 aaKnown RBP21.86■■□□□ 1.09
NLE1-204ENST00000588019 MRS2Q9HD23 443 aa21.85■■□□□ 1.09
NLE1-204ENST00000588019 TOM1O60784 492 aa21.84■■□□□ 1.09
NLE1-204ENST00000588019 ABTB2Q8N961 1025 aa21.84■■□□□ 1.09
NLE1-204ENST00000588019 OVOS2A0A0J9YW53 1432 aa21.83■■□□□ 1.09
NLE1-204ENST00000588019 OVOS2Q6IE36 1432 aa21.83■■□□□ 1.09
NLE1-204ENST00000588019 TNNT2P45379 298 aaPredicted RBP21.83■■□□□ 1.09
NLE1-204ENST00000588019 ZRANB1Q9UGI0 708 aa21.83■■□□□ 1.09
NLE1-204ENST00000588019 SBNO1A3KN83 1393 aa21.83■■□□□ 1.08
NLE1-204ENST00000588019 NLRP6P59044 892 aa21.82■■□□□ 1.08
NLE1-204ENST00000588019 XPCQ01831 940 aaPredicted RBP21.82■■□□□ 1.08
NLE1-204ENST00000588019 AATKQ6ZMQ8 1374 aa21.8■■□□□ 1.08
NLE1-204ENST00000588019 CCDC184Q52MB2 194 aa21.8■■□□□ 1.08
NLE1-204ENST00000588019 CERKQ8TCT0 537 aa21.8■■□□□ 1.08
NLE1-204ENST00000588019 PIK3C2AO00443 1686 aa21.79■■□□□ 1.08
NLE1-204ENST00000588019 PXDNQ92626 1479 aa21.79■■□□□ 1.08
NLE1-204ENST00000588019 DDX17Q92841 729 aaKnown RBP21.79■■□□□ 1.08
NLE1-204ENST00000588019 SOS2Q07890 1332 aaPredicted RBP21.79■■□□□ 1.08
NLE1-204ENST00000588019 TRPM3Q9HCF6 1732 aaPredicted RBP21.78■■□□□ 1.08
NLE1-204ENST00000588019 USP54Q70EL1 1684 aa21.76■■□□□ 1.07
NLE1-204ENST00000588019 MTHFSP49914 203 aa21.76■■□□□ 1.07
NLE1-204ENST00000588019 TNS3Q68CZ2 1445 aa21.76■■□□□ 1.07
NLE1-204ENST00000588019 LMOD2Q6P5Q4 547 aa21.76■■□□□ 1.07
NLE1-204ENST00000588019 CFAP53Q96M91 514 aa21.76■■□□□ 1.07
NLE1-204ENST00000588019 SPATA31A3Q5VYP0 1347 aa21.76■■□□□ 1.07
NLE1-204ENST00000588019 UBAP1LF5GYI3 381 aa21.75■■□□□ 1.07
NLE1-204ENST00000588019 NUTM2GQ5VZR2 741 aa21.75■■□□□ 1.07
NLE1-204ENST00000588019 ARHGEF10O15013 1369 aa21.74■■□□□ 1.07
NLE1-204ENST00000588019 KCNH5Q8NCM2 988 aa21.74■■□□□ 1.07
NLE1-204ENST00000588019 NHSL1Q5SYE7 1610 aa21.73■■□□□ 1.07
NLE1-204ENST00000588019 ROBO1Q9Y6N7 1651 aa21.73■■□□□ 1.07
NLE1-204ENST00000588019 POLKQ9UBT6 870 aa21.73■■□□□ 1.07
NLE1-204ENST00000588019 PNISRQ8TF01 805 aaKnown RBP21.72■■□□□ 1.07
NLE1-204ENST00000588019 ALS2Q96Q42 1657 aa21.72■■□□□ 1.07
NLE1-204ENST00000588019 USP19O94966 1318 aa21.71■■□□□ 1.07
NLE1-204ENST00000588019 AHDC1Q5TGY3 1603 aaPredicted RBP21.7■■□□□ 1.06
NLE1-204ENST00000588019 SMG6Q86US8 1419 aaKnown RBP21.7■■□□□ 1.06
NLE1-204ENST00000588019 FBLN1P23142 703 aa21.69■■□□□ 1.06
NLE1-204ENST00000588019 PIP4K2BP78356 416 aa21.69■■□□□ 1.06
NLE1-204ENST00000588019 RRS1Q15050 365 aaKnown RBP21.68■■□□□ 1.06
NLE1-204ENST00000588019 FAM9BQ8IZU0 186 aa21.68■■□□□ 1.06
NLE1-204ENST00000588019 LRRC59Q96AG4 307 aaKnown RBP21.68■■□□□ 1.06
NLE1-204ENST00000588019 EMILIN1Q9Y6C2 1016 aa21.68■■□□□ 1.06
NLE1-204ENST00000588019 INSRP06213 1382 aa21.68■■□□□ 1.06
NLE1-204ENST00000588019 PNPLA6Q8IY17 1366 aa21.68■■□□□ 1.06
NLE1-204ENST00000588019 MARF1Q9Y4F3 1742 aaKnown RBP21.67■■□□□ 1.06
NLE1-204ENST00000588019 SLIT3O75094 1523 aa21.67■■□□□ 1.06
NLE1-204ENST00000588019 PPM1GO15355 546 aaPredicted RBP21.67■■□□□ 1.06
NLE1-204ENST00000588019 SOX12O15370 315 aa21.67■■□□□ 1.06
NLE1-204ENST00000588019 GCP02774 474 aa21.67■■□□□ 1.06
NLE1-204ENST00000588019 CDK12Q9NYV4 1490 aaPredicted RBP21.66■■□□□ 1.06
NLE1-204ENST00000588019 KIF24Q5T7B8 1368 aa21.66■■□□□ 1.06
NLE1-204ENST00000588019 WDR43Q15061 677 aaKnown RBP eCLIP21.66■■□□□ 1.06
NLE1-204ENST00000588019 MAP3K19Q56UN5 1328 aa21.65■■□□□ 1.06
NLE1-204ENST00000588019 NUDCQ9Y266 331 aa21.64■■□□□ 1.05
NLE1-204ENST00000588019 MAP2P11137 1827 aaKnown RBP21.64■■□□□ 1.05
NLE1-204ENST00000588019 MED1Q15648 1581 aaPredicted RBP21.63■■□□□ 1.05
NLE1-204ENST00000588019 DIAPH1O60610 1272 aaKnown RBP21.63■■□□□ 1.05
NLE1-204ENST00000588019 AMPHP49418 695 aa21.63■■□□□ 1.05
NLE1-204ENST00000588019 NFAT5O94916 1531 aa21.63■■□□□ 1.05
NLE1-204ENST00000588019 FLT4P35916 1363 aa21.62■■□□□ 1.05
NLE1-204ENST00000588019 RTL1A6NKG5 1358 aa21.61■■□□□ 1.05
NLE1-204ENST00000588019 COL3A1P02461 1466 aaPredicted RBP21.61■■□□□ 1.05
NLE1-204ENST00000588019 PLEKHG5O94827 1062 aa21.59■■□□□ 1.05
NLE1-204ENST00000588019 ARHGEF25Q86VW2 580 aa21.59■■□□□ 1.05
NLE1-204ENST00000588019 ADAMTS8Q9UP79 889 aa21.59■■□□□ 1.05
NLE1-204ENST00000588019 PHLPP1O60346 1717 aa21.58■■□□□ 1.04
NLE1-204ENST00000588019 HOXC9P31274 260 aa21.57■■□□□ 1.04
NLE1-204ENST00000588019 HAP1P54257 671 aaPredicted RBP21.57■■□□□ 1.04
NLE1-204ENST00000588019 CABLES1Q8TDN4 633 aa21.57■■□□□ 1.04
NLE1-204ENST00000588019 IP6K1Q92551 441 aa21.57■■□□□ 1.04
NLE1-204ENST00000588019 YTHDC1Q96MU7 727 aaKnown RBP21.57■■□□□ 1.04
NLE1-204ENST00000588019 PHRF1Q9P1Y6 1649 aaKnown RBP21.56■■□□□ 1.04
NLE1-204ENST00000588019 IL13P35225 146 aa21.56■■□□□ 1.04
NLE1-204ENST00000588019 HSP90AB2PQ58FF8 381 aa21.56■■□□□ 1.04
NLE1-204ENST00000588019 COL16A1Q07092 1604 aaPredicted RBP21.55■■□□□ 1.04
NLE1-204ENST00000588019 PEAK1Q9H792 1746 aa21.55■■□□□ 1.04
NLE1-204ENST00000588019 CPDO75976 1380 aa21.55■■□□□ 1.04
NLE1-204ENST00000588019 SHPRHQ149N8 1683 aa21.54■■□□□ 1.04
NLE1-204ENST00000588019 ZBTB7CA1YPR0 619 aa21.54■■□□□ 1.04
NLE1-204ENST00000588019 U2SURPO15042 1029 aaKnown RBP21.54■■□□□ 1.04
NLE1-204ENST00000588019 U2AF1L5P0DN76 240 aaPredicted RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms