RNA–Protein interactions for RNA: ENST00000587760.5

NFIX-209, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-209ENST00000587760 PNPLA6Q8IY17 1366 aa22.39■■□□□ 1.17
NFIX-209ENST00000587760 NCKAP5LQ9HCH0 1330 aa22.38■■□□□ 1.17
NFIX-209ENST00000587760 FKBP8Q14318 412 aa22.38■■□□□ 1.17
NFIX-209ENST00000587760 NKTRP30414 1462 aaKnown RBP22.38■■□□□ 1.17
NFIX-209ENST00000587760 TTC21BQ7Z4L5 1316 aa22.38■■□□□ 1.17
NFIX-209ENST00000587760 RUNDC1Q96C34 613 aa22.37■■□□□ 1.17
NFIX-209ENST00000587760 NALCNQ8IZF0 1738 aa22.37■■□□□ 1.17
NFIX-209ENST00000587760 COL3A1P02461 1466 aaPredicted RBP22.36■■□□□ 1.17
NFIX-209ENST00000587760 NME9Q86XW9 330 aa22.35■■□□□ 1.17
NFIX-209ENST00000587760 NGDNQ8NEJ9 315 aaKnown RBP22.35■■□□□ 1.17
NFIX-209ENST00000587760 SALL2Q9Y467 1007 aaPredicted RBP22.34■■□□□ 1.17
NFIX-209ENST00000587760 SSH2Q76I76 1423 aa22.34■■□□□ 1.17
NFIX-209ENST00000587760 NUTM2FA1L443 756 aa22.34■■□□□ 1.17
NFIX-209ENST00000587760 CDK12Q9NYV4 1490 aaPredicted RBP22.33■■□□□ 1.17
NFIX-209ENST00000587760 APAF1O14727 1248 aa22.33■■□□□ 1.16
NFIX-209ENST00000587760 DIAPH1O60610 1272 aaKnown RBP22.33■■□□□ 1.16
NFIX-209ENST00000587760 GOLGA2Q08379 1002 aa22.33■■□□□ 1.16
NFIX-209ENST00000587760 ZNF521Q96K83 1311 aa22.33■■□□□ 1.16
NFIX-209ENST00000587760 OVOS2A0A0J9YW53 1432 aa22.32■■□□□ 1.16
NFIX-209ENST00000587760 OVOS2Q6IE36 1432 aa22.32■■□□□ 1.16
NFIX-209ENST00000587760 U2AF1L5P0DN76 240 aaPredicted RBP22.32■■□□□ 1.16
NFIX-209ENST00000587760 U2AF1Q01081 240 aaKnown RBP eCLIP22.32■■□□□ 1.16
NFIX-209ENST00000587760 CCDC146Q8IYE0 955 aa22.32■■□□□ 1.16
NFIX-209ENST00000587760 POLKQ9UBT6 870 aa22.32■■□□□ 1.16
NFIX-209ENST00000587760 RNF123Q5XPI4 1314 aa22.3■■□□□ 1.16
NFIX-209ENST00000587760 NCOA3Q9Y6Q9 1424 aa22.3■■□□□ 1.16
NFIX-209ENST00000587760 RGPD8O14715 1765 aaPredicted RBP22.3■■□□□ 1.16
NFIX-209ENST00000587760 USP31Q70CQ4 1352 aa22.29■■□□□ 1.16
NFIX-209ENST00000587760 MAP2P11137 1827 aaKnown RBP22.29■■□□□ 1.16
NFIX-209ENST00000587760 C14orf37Q86TY3 774 aa22.28■■□□□ 1.16
NFIX-209ENST00000587760 IQSEC2Q5JU85 1478 aa22.28■■□□□ 1.16
NFIX-209ENST00000587760 CCDC27Q2M243 656 aa22.28■■□□□ 1.16
NFIX-209ENST00000587760 PELP1Q8IZL8 1130 aaKnown RBP22.28■■□□□ 1.16
NFIX-209ENST00000587760 PMFBP1Q8TBY8 1022 aa22.28■■□□□ 1.16
NFIX-209ENST00000587760 LRRC7Q96NW7 1537 aa22.27■■□□□ 1.16
NFIX-209ENST00000587760 SENP3-EIF4A1A0A087X0R7 540 aa22.27■■□□□ 1.16
NFIX-209ENST00000587760 U2SURPO15042 1029 aaKnown RBP22.27■■□□□ 1.16
NFIX-209ENST00000587760 PROSER2Q86WR7 435 aaPredicted RBP22.27■■□□□ 1.16
NFIX-209ENST00000587760 PHF8Q9UPP1 1060 aa22.27■■□□□ 1.16
NFIX-209ENST00000587760 KDM4FA0A1W2PPD8 638 aa22.25■■□□□ 1.15
NFIX-209ENST00000587760 E9PSI1 815 aa22.25■■□□□ 1.15
NFIX-209ENST00000587760 NEFMP07197 916 aa22.25■■□□□ 1.15
NFIX-209ENST00000587760 TCP11L2Q8N4U5 519 aa22.25■■□□□ 1.15
NFIX-209ENST00000587760 RCAN3Q9UKA8 241 aa22.25■■□□□ 1.15
NFIX-209ENST00000587760 MAPK8IP3Q9UPT6 1336 aa22.24■■□□□ 1.15
NFIX-209ENST00000587760 FCHSD2O94868 740 aa22.24■■□□□ 1.15
NFIX-209ENST00000587760 USP54Q70EL1 1684 aa22.23■■□□□ 1.15
NFIX-209ENST00000587760 CDCA7LQ96GN5 454 aa22.23■■□□□ 1.15
NFIX-209ENST00000587760 DCCP43146 1447 aa22.23■■□□□ 1.15
NFIX-209ENST00000587760 PPM1GO15355 546 aaPredicted RBP22.22■■□□□ 1.15
NFIX-209ENST00000587760 SLFN5Q08AF3 891 aa22.22■■□□□ 1.15
NFIX-209ENST00000587760 WDR63Q8IWG1 891 aa22.22■■□□□ 1.15
NFIX-209ENST00000587760 C19orf44Q9H6X5 657 aa22.22■■□□□ 1.15
NFIX-209ENST00000587760 ZRANB1Q9UGI0 708 aa22.22■■□□□ 1.15
NFIX-209ENST00000587760 PHF23Q9BUL5 403 aaPredicted RBP22.22■■□□□ 1.15
NFIX-209ENST00000587760 LMTK3Q96Q04 1460 aa22.21■■□□□ 1.15
NFIX-209ENST00000587760 WWC1Q8IX03 1113 aa22.21■■□□□ 1.15
NFIX-209ENST00000587760 EMILIN1Q9Y6C2 1016 aa22.21■■□□□ 1.15
NFIX-209ENST00000587760 KIF24Q5T7B8 1368 aa22.2■■□□□ 1.14
NFIX-209ENST00000587760 DUSP27Q5VZP5 1158 aa22.2■■□□□ 1.14
NFIX-209ENST00000587760 TRMT2AQ8IZ69 625 aaKnown RBP22.2■■□□□ 1.14
NFIX-209ENST00000587760 PLEKHF1Q96S99 279 aa22.19■■□□□ 1.14
NFIX-209ENST00000587760 PIK3C2AO00443 1686 aa22.18■■□□□ 1.14
NFIX-209ENST00000587760 KIF1AQ12756 1690 aa22.18■■□□□ 1.14
NFIX-209ENST00000587760 IL13P35225 146 aa22.17■■□□□ 1.14
NFIX-209ENST00000587760 ESCO1Q5FWF5 840 aa22.17■■□□□ 1.14
NFIX-209ENST00000587760 RRS1Q15050 365 aaKnown RBP22.15■■□□□ 1.14
NFIX-209ENST00000587760 HSPA2P54652 639 aa22.15■■□□□ 1.14
NFIX-209ENST00000587760 RRP1P56182 461 aaKnown RBP22.15■■□□□ 1.14
NFIX-209ENST00000587760 NLRP6P59044 892 aa22.15■■□□□ 1.14
NFIX-209ENST00000587760 PSME1Q06323 249 aa22.15■■□□□ 1.14
NFIX-209ENST00000587760 SBNO1A3KN83 1393 aa22.14■■□□□ 1.13
NFIX-209ENST00000587760 ATF3P18847 181 aa22.14■■□□□ 1.13
NFIX-209ENST00000587760 PPP4R2Q9NY27 417 aa22.14■■□□□ 1.13
NFIX-209ENST00000587760 FLT4P35916 1363 aa22.13■■□□□ 1.13
NFIX-209ENST00000587760 TMEM94Q12767 1356 aa22.13■■□□□ 1.13
NFIX-209ENST00000587760 FBLN1P23142 703 aa22.13■■□□□ 1.13
NFIX-209ENST00000587760 TMPOP42166 694 aaKnown RBP22.13■■□□□ 1.13
NFIX-209ENST00000587760 ABTB2Q8N961 1025 aa22.13■■□□□ 1.13
NFIX-209ENST00000587760 RBM33Q96EV2 1170 aaKnown RBP22.13■■□□□ 1.13
NFIX-209ENST00000587760 RSPH6AQ9H0K4 717 aa22.13■■□□□ 1.13
NFIX-209ENST00000587760 MYH16Q9H6N6 1097 aa22.12■■□□□ 1.13
NFIX-209ENST00000587760 NEUROD2Q15784 382 aa22.11■■□□□ 1.13
NFIX-209ENST00000587760 IL16Q14005 1332 aa22.11■■□□□ 1.13
NFIX-209ENST00000587760 PAK3O75914 559 aaPredicted RBP22.1■■□□□ 1.13
NFIX-209ENST00000587760 CADPS2Q86UW7 1296 aa22.1■■□□□ 1.13
NFIX-209ENST00000587760 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.1■■□□□ 1.13
NFIX-209ENST00000587760 RRP7AQ9Y3A4 280 aaKnown RBP22.1■■□□□ 1.13
NFIX-209ENST00000587760 C1orf167Q5SNV9 1468 aa22.1■■□□□ 1.13
NFIX-209ENST00000587760 PRKAR2BP31323 418 aa22.09■■□□□ 1.13
NFIX-209ENST00000587760 IRX6P78412 446 aaPredicted RBP22.09■■□□□ 1.13
NFIX-209ENST00000587760 STRCQ7RTU9 1775 aa22.09■■□□□ 1.13
NFIX-209ENST00000587760 STRCP1A6NGW2 1772 aa22.09■■□□□ 1.13
NFIX-209ENST00000587760 CALD1Q05682 793 aaKnown RBP22.09■■□□□ 1.13
NFIX-209ENST00000587760 KCNH5Q8NCM2 988 aa22.09■■□□□ 1.13
NFIX-209ENST00000587760 MAP3K19Q56UN5 1328 aa22.08■■□□□ 1.13
NFIX-209ENST00000587760 RTL1A6NKG5 1358 aa22.08■■□□□ 1.13
NFIX-209ENST00000587760 MSH6P52701 1360 aa22.08■■□□□ 1.13
NFIX-209ENST00000587760 AMPHP49418 695 aa22.07■■□□□ 1.12
NFIX-209ENST00000587760 LMOD3Q0VAK6 560 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms