RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 SPATA31D1Q6ZQQ2 1576 aa25.4■■□□□ 1.66
MBD1-216ENST00000587605 DIP2BQ9P265 1576 aa25.4■■□□□ 1.66
MBD1-216ENST00000587605 ATP7BP35670 1465 aa25.4■■□□□ 1.66
MBD1-216ENST00000587605 GGNBP2Q9H3C7 697 aa25.39■■□□□ 1.66
MBD1-216ENST00000587605 TMPOP42166 694 aaKnown RBP25.39■■□□□ 1.65
MBD1-216ENST00000587605 ZKSCAN2Q63HK3 967 aa25.39■■□□□ 1.65
MBD1-216ENST00000587605 RWDD1Q9H446 243 aaPredicted RBP25.39■■□□□ 1.65
MBD1-216ENST00000587605 STAG3Q9UJ98 1225 aa25.37■■□□□ 1.65
MBD1-216ENST00000587605 U2SURPO15042 1029 aaKnown RBP25.37■■□□□ 1.65
MBD1-216ENST00000587605 CDK19Q9BWU1 502 aa25.37■■□□□ 1.65
MBD1-216ENST00000587605 MVPQ14764 893 aaKnown RBP25.36■■□□□ 1.65
MBD1-216ENST00000587605 A2ML1A8K2U0 1454 aa25.36■■□□□ 1.65
MBD1-216ENST00000587605 DIAPH1O60610 1272 aaKnown RBP25.35■■□□□ 1.65
MBD1-216ENST00000587605 RLBP1P12271 317 aa25.35■■□□□ 1.65
MBD1-216ENST00000587605 SETD1AO15047 1707 aaKnown RBP25.35■■□□□ 1.65
MBD1-216ENST00000587605 FBXO31Q5XUX0 539 aaPredicted RBP25.35■■□□□ 1.65
MBD1-216ENST00000587605 DZIP1LQ8IYY4 767 aaKnown RBP25.33■■□□□ 1.65
MBD1-216ENST00000587605 TRIM35Q9UPQ4 493 aa25.33■■□□□ 1.65
MBD1-216ENST00000587605 RIMS2Q9UQ26 1411 aa25.32■■□□□ 1.64
MBD1-216ENST00000587605 FTSJ3Q8IY81 847 aaKnown RBP25.32■■□□□ 1.64
MBD1-216ENST00000587605 PCDHB15Q9Y5E8 787 aa25.32■■□□□ 1.64
MBD1-216ENST00000587605 RIMBP3CA6NJZ7 1639 aa25.3■■□□□ 1.64
MBD1-216ENST00000587605 RIMBP3BA6NNM3 1639 aa25.3■■□□□ 1.64
MBD1-216ENST00000587605 RIMBP3Q9UFD9 1639 aa25.3■■□□□ 1.64
MBD1-216ENST00000587605 FCHSD2O94868 740 aa25.3■■□□□ 1.64
MBD1-216ENST00000587605 FAM69CQ0P6D2 419 aa25.3■■□□□ 1.64
MBD1-216ENST00000587605 BCL2L13Q9BXK5 485 aa25.3■■□□□ 1.64
MBD1-216ENST00000587605 SMC4Q9NTJ3 1288 aa25.29■■□□□ 1.64
MBD1-216ENST00000587605 CABP1Q9NZU7 370 aa25.29■■□□□ 1.64
MBD1-216ENST00000587605 EXOSC9Q06265 439 aaKnown RBP25.28■■□□□ 1.64
MBD1-216ENST00000587605 DDX19BQ9UMR2 479 aa25.27■■□□□ 1.64
MBD1-216ENST00000587605 CYB5RLQ6IPT4 315 aa25.27■■□□□ 1.64
MBD1-216ENST00000587605 ZNF428Q96B54 188 aa25.27■■□□□ 1.64
MBD1-216ENST00000587605 RIPK4P57078 832 aa25.26■■□□□ 1.63
MBD1-216ENST00000587605 TSR2Q969E8 191 aaKnown RBP25.26■■□□□ 1.63
MBD1-216ENST00000587605 PDZRN3Q9UPQ7 1066 aa25.26■■□□□ 1.63
MBD1-216ENST00000587605 USP19O94966 1318 aa25.26■■□□□ 1.63
MBD1-216ENST00000587605 KIF16BQ96L93 1317 aa25.26■■□□□ 1.63
MBD1-216ENST00000587605 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.25■■□□□ 1.63
MBD1-216ENST00000587605 TNNQ9UQP3 1299 aa25.25■■□□□ 1.63
MBD1-216ENST00000587605 LRRC7Q96NW7 1537 aa25.25■■□□□ 1.63
MBD1-216ENST00000587605 IPO8O15397 1037 aaKnown RBP25.25■■□□□ 1.63
MBD1-216ENST00000587605 UPF2Q9HAU5 1272 aaKnown RBP25.25■■□□□ 1.63
MBD1-216ENST00000587605 KNDC1Q76NI1 1749 aa25.25■■□□□ 1.63
MBD1-216ENST00000587605 FAM135BQ49AJ0 1406 aa25.25■■□□□ 1.63
MBD1-216ENST00000587605 EDC4Q6P2E9 1401 aaKnown RBP25.25■■□□□ 1.63
MBD1-216ENST00000587605 HDAC1Q13547 482 aaPredicted RBP25.24■■□□□ 1.63
MBD1-216ENST00000587605 BECN1Q14457 450 aa25.24■■□□□ 1.63
MBD1-216ENST00000587605 ALDH1L2Q3SY69 923 aa25.24■■□□□ 1.63
MBD1-216ENST00000587605 ATF7IPQ6VMQ6 1270 aa25.24■■□□□ 1.63
MBD1-216ENST00000587605 PPIP5K1Q6PFW1 1433 aa25.24■■□□□ 1.63
MBD1-216ENST00000587605 NFKBIBQ15653 356 aa25.23■■□□□ 1.63
MBD1-216ENST00000587605 TSPOAP1O95153 1857 aa25.22■■□□□ 1.63
MBD1-216ENST00000587605 CALD1Q05682 793 aaKnown RBP25.22■■□□□ 1.63
MBD1-216ENST00000587605 SSH1Q8WYL5 1049 aa25.22■■□□□ 1.63
MBD1-216ENST00000587605 CPSF1Q10570 1443 aaKnown RBP25.22■■□□□ 1.63
MBD1-216ENST00000587605 TRIM27P14373 513 aa25.22■■□□□ 1.63
MBD1-216ENST00000587605 SIRT1Q96EB6 747 aa25.22■■□□□ 1.63
MBD1-216ENST00000587605 NRXN3Q9Y4C0 1643 aa25.21■■□□□ 1.63
MBD1-216ENST00000587605 SLC4A3P48751 1232 aa25.21■■□□□ 1.63
MBD1-216ENST00000587605 BRPF1P55201 1214 aaPredicted RBP25.2■■□□□ 1.62
MBD1-216ENST00000587605 CDK12Q9NYV4 1490 aaPredicted RBP25.2■■□□□ 1.62
MBD1-216ENST00000587605 RSPH6AQ9H0K4 717 aa25.2■■□□□ 1.62
MBD1-216ENST00000587605 POLKQ9UBT6 870 aa25.19■■□□□ 1.62
MBD1-216ENST00000587605 AATKQ6ZMQ8 1374 aa25.19■■□□□ 1.62
MBD1-216ENST00000587605 MAP2P11137 1827 aaKnown RBP25.18■■□□□ 1.62
MBD1-216ENST00000587605 SENP3Q9H4L4 574 aaPredicted RBP25.18■■□□□ 1.62
MBD1-216ENST00000587605 TECPR2O15040 1411 aa25.17■■□□□ 1.62
MBD1-216ENST00000587605 HDGFP51858 240 aaKnown RBP25.17■■□□□ 1.62
MBD1-216ENST00000587605 WASLO00401 505 aaPredicted RBP25.16■■□□□ 1.62
MBD1-216ENST00000587605 MON2Q7Z3U7 1717 aa25.16■■□□□ 1.62
MBD1-216ENST00000587605 WAPLQ7Z5K2 1190 aa25.16■■□□□ 1.62
MBD1-216ENST00000587605 ITPRIPQ8IWB1 547 aa25.16■■□□□ 1.62
MBD1-216ENST00000587605 CHMP4BQ9H444 224 aaKnown RBP25.16■■□□□ 1.62
MBD1-216ENST00000587605 NOB1Q9ULX3 412 aaKnown RBP25.16■■□□□ 1.62
MBD1-216ENST00000587605 NFE2L2Q16236 605 aa25.15■■□□□ 1.62
MBD1-216ENST00000587605 PRKAR2BP31323 418 aa25.14■■□□□ 1.62
MBD1-216ENST00000587605 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.14■■□□□ 1.62
MBD1-216ENST00000587605 TBC1D32Q96NH3 1257 aa25.14■■□□□ 1.62
MBD1-216ENST00000587605 CPS1P31327 1500 aa25.14■■□□□ 1.62
MBD1-216ENST00000587605 SEC24BO95487 1268 aa25.14■■□□□ 1.61
MBD1-216ENST00000587605 SMC5Q8IY18 1101 aa25.12■■□□□ 1.61
MBD1-216ENST00000587605 AKAP12Q02952 1782 aa25.12■■□□□ 1.61
MBD1-216ENST00000587605 LMOD3Q0VAK6 560 aa25.11■■□□□ 1.61
MBD1-216ENST00000587605 ZBTB40Q9NUA8 1239 aa25.11■■□□□ 1.61
MBD1-216ENST00000587605 ITSN1Q15811 1721 aa25.1■■□□□ 1.61
MBD1-216ENST00000587605 GSE1Q14687 1217 aa25.1■■□□□ 1.61
MBD1-216ENST00000587605 TMEM57Q8N5G2 664 aa25.1■■□□□ 1.61
MBD1-216ENST00000587605 ARHGAP45Q92619 1136 aa25.1■■□□□ 1.61
MBD1-216ENST00000587605 IFT57Q9NWB7 429 aa25.1■■□□□ 1.61
MBD1-216ENST00000587605 GNAI1P63096 354 aa25.09■■□□□ 1.61
MBD1-216ENST00000587605 IL13P35225 146 aa25.08■■□□□ 1.61
MBD1-216ENST00000587605 METP08581 1390 aa25.08■■□□□ 1.6
MBD1-216ENST00000587605 ESF1Q9H501 851 aaKnown RBP25.08■■□□□ 1.6
MBD1-216ENST00000587605 C3P01024 1663 aa25.07■■□□□ 1.6
MBD1-216ENST00000587605 PIK3R4Q99570 1358 aa25.06■■□□□ 1.6
MBD1-216ENST00000587605 NUDT16Q96DE0 195 aaKnown RBP25.06■■□□□ 1.6
MBD1-216ENST00000587605 ZNF692Q9BU19 519 aaPredicted RBP25.06■■□□□ 1.6
MBD1-216ENST00000587605 CCDC61Q9Y6R9 512 aa25.06■■□□□ 1.6
MBD1-216ENST00000587605 PTCH1Q13635 1447 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms