RNA–Protein interactions for RNA: ENST00000587600.1

LDLRAD4-210, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 3

Gene LDLRAD4, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-210ENST00000587600 TTC21BQ7Z4L5 1316 aa18.2■□□□□ 0.5
LDLRAD4-210ENST00000587600 AMER1Q5JTC6 1135 aaPredicted RBP18.19■□□□□ 0.5
LDLRAD4-210ENST00000587600 KRT28Q7Z3Y7 464 aa18.18■□□□□ 0.5
LDLRAD4-210ENST00000587600 SOS2Q07890 1332 aaPredicted RBP18.18■□□□□ 0.5
LDLRAD4-210ENST00000587600 AHDC1Q5TGY3 1603 aaPredicted RBP18.17■□□□□ 0.5
LDLRAD4-210ENST00000587600 PXDNQ92626 1479 aa18.17■□□□□ 0.5
LDLRAD4-210ENST00000587600 ROBO1Q9Y6N7 1651 aa18.17■□□□□ 0.5
LDLRAD4-210ENST00000587600 NHSL1Q5SYE7 1610 aa18.16■□□□□ 0.5
LDLRAD4-210ENST00000587600 ANP32CO43423 234 aa18.16■□□□□ 0.5
LDLRAD4-210ENST00000587600 RALBP1Q15311 655 aa18.16■□□□□ 0.5
LDLRAD4-210ENST00000587600 USP31Q70CQ4 1352 aa18.16■□□□□ 0.5
LDLRAD4-210ENST00000587600 FYB1O15117 783 aa18.15■□□□□ 0.5
LDLRAD4-210ENST00000587600 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.14■□□□□ 0.49
LDLRAD4-210ENST00000587600 ARHGEF10O15013 1369 aa18.14■□□□□ 0.49
LDLRAD4-210ENST00000587600 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
LDLRAD4-210ENST00000587600 TNS3Q68CZ2 1445 aa18.13■□□□□ 0.49
LDLRAD4-210ENST00000587600 TRPM3Q9HCF6 1732 aaPredicted RBP18.12■□□□□ 0.49
LDLRAD4-210ENST00000587600 PAK3O75914 559 aaPredicted RBP18.12■□□□□ 0.49
LDLRAD4-210ENST00000587600 ABTB2Q8N961 1025 aa18.12■□□□□ 0.49
LDLRAD4-210ENST00000587600 COG3Q96JB2 828 aa18.12■□□□□ 0.49
LDLRAD4-210ENST00000587600 PARD3Q8TEW0 1356 aa18.12■□□□□ 0.49
LDLRAD4-210ENST00000587600 PIP4K2BP78356 416 aa18.11■□□□□ 0.49
LDLRAD4-210ENST00000587600 NLRP13Q86W25 1043 aa18.11■□□□□ 0.49
LDLRAD4-210ENST00000587600 LRRC59Q96AG4 307 aaKnown RBP18.11■□□□□ 0.49
LDLRAD4-210ENST00000587600 PRKRIP1Q9H875 184 aaPredicted RBP18.11■□□□□ 0.49
LDLRAD4-210ENST00000587600 SPATA31A3Q5VYP0 1347 aa18.11■□□□□ 0.49
LDLRAD4-210ENST00000587600 KIF20BQ96Q89 1820 aa18.1■□□□□ 0.49
LDLRAD4-210ENST00000587600 USP54Q70EL1 1684 aa18.1■□□□□ 0.49
LDLRAD4-210ENST00000587600 OVOS2A0A0J9YW53 1432 aa18.1■□□□□ 0.49
LDLRAD4-210ENST00000587600 OVOS2Q6IE36 1432 aa18.1■□□□□ 0.49
LDLRAD4-210ENST00000587600 CC2D1BQ5T0F9 858 aaKnown RBP18.1■□□□□ 0.49
LDLRAD4-210ENST00000587600 NME9Q86XW9 330 aa18.1■□□□□ 0.49
LDLRAD4-210ENST00000587600 MORC1Q86VD1 984 aa18.09■□□□□ 0.49
LDLRAD4-210ENST00000587600 GGNBP2Q9H3C7 697 aa18.09■□□□□ 0.49
LDLRAD4-210ENST00000587600 ANKRD26Q9UPS8 1709 aa18.09■□□□□ 0.49
LDLRAD4-210ENST00000587600 NLRP6P59044 892 aa18.08■□□□□ 0.48
LDLRAD4-210ENST00000587600 XPCQ01831 940 aaPredicted RBP18.08■□□□□ 0.48
LDLRAD4-210ENST00000587600 PIK3C2AO00443 1686 aa18.08■□□□□ 0.48
LDLRAD4-210ENST00000587600 ALS2Q96Q42 1657 aa18.08■□□□□ 0.48
LDLRAD4-210ENST00000587600 AATKQ6ZMQ8 1374 aa18.07■□□□□ 0.48
LDLRAD4-210ENST00000587600 KCNH5Q8NCM2 988 aa18.07■□□□□ 0.48
LDLRAD4-210ENST00000587600 DDX17Q92841 729 aaKnown RBP18.07■□□□□ 0.48
LDLRAD4-210ENST00000587600 MED1Q15648 1581 aaPredicted RBP18.06■□□□□ 0.48
LDLRAD4-210ENST00000587600 USP19O94966 1318 aa18.05■□□□□ 0.48
LDLRAD4-210ENST00000587600 MYBBP1AQ9BQG0 1328 aaKnown RBP18.05■□□□□ 0.48
LDLRAD4-210ENST00000587600 COL16A1Q07092 1604 aaPredicted RBP18.04■□□□□ 0.48
LDLRAD4-210ENST00000587600 PHLPP1O60346 1717 aa18.03■□□□□ 0.48
LDLRAD4-210ENST00000587600 LMOD2Q6P5Q4 547 aa18.03■□□□□ 0.48
LDLRAD4-210ENST00000587600 SLIT3O75094 1523 aa18.03■□□□□ 0.48
LDLRAD4-210ENST00000587600 KIF24Q5T7B8 1368 aa18.02■□□□□ 0.47
LDLRAD4-210ENST00000587600 CCER2I3L3R5 266 aa18■□□□□ 0.47
LDLRAD4-210ENST00000587600 PPP2R1AP30153 589 aa18■□□□□ 0.47
LDLRAD4-210ENST00000587600 ZRANB1Q9UGI0 708 aa18■□□□□ 0.47
LDLRAD4-210ENST00000587600 COL22A1Q8NFW1 1626 aaPredicted RBP18■□□□□ 0.47
LDLRAD4-210ENST00000587600 SMG6Q86US8 1419 aaKnown RBP17.99■□□□□ 0.47
LDLRAD4-210ENST00000587600 PNPLA6Q8IY17 1366 aa17.99■□□□□ 0.47
LDLRAD4-210ENST00000587600 GCP02774 474 aa17.98■□□□□ 0.47
LDLRAD4-210ENST00000587600 NUTM2GQ5VZR2 741 aa17.98■□□□□ 0.47
LDLRAD4-210ENST00000587600 JCADQ9P266 1359 aa17.98■□□□□ 0.47
LDLRAD4-210ENST00000587600 MARF1Q9Y4F3 1742 aaKnown RBP17.98■□□□□ 0.47
LDLRAD4-210ENST00000587600 CNGB1Q14028 1251 aaPredicted RBP17.97■□□□□ 0.47
LDLRAD4-210ENST00000587600 RTL1A6NKG5 1358 aa17.96■□□□□ 0.47
LDLRAD4-210ENST00000587600 CPDO75976 1380 aa17.96■□□□□ 0.47
LDLRAD4-210ENST00000587600 MIER1Q8N108 512 aa17.96■□□□□ 0.47
LDLRAD4-210ENST00000587600 NFAT5O94916 1531 aa17.96■□□□□ 0.47
LDLRAD4-210ENST00000587600 ABCC6O95255 1503 aa17.95■□□□□ 0.46
LDLRAD4-210ENST00000587600 TNNT2P45379 298 aaPredicted RBP17.95■□□□□ 0.46
LDLRAD4-210ENST00000587600 CFAP53Q96M91 514 aa17.95■□□□□ 0.46
LDLRAD4-210ENST00000587600 SHPRHQ149N8 1683 aa17.95■□□□□ 0.46
LDLRAD4-210ENST00000587600 CRYBG1Q9Y4K1 1723 aa17.95■□□□□ 0.46
LDLRAD4-210ENST00000587600 PHRF1Q9P1Y6 1649 aaKnown RBP17.94■□□□□ 0.46
LDLRAD4-210ENST00000587600 INSRP06213 1382 aa17.94■□□□□ 0.46
LDLRAD4-210ENST00000587600 POLKQ9UBT6 870 aa17.94■□□□□ 0.46
LDLRAD4-210ENST00000587600 SPATA31A6Q5VVP1 1343 aa17.94■□□□□ 0.46
LDLRAD4-210ENST00000587600 CDK12Q9NYV4 1490 aaPredicted RBP17.94■□□□□ 0.46
LDLRAD4-210ENST00000587600 HSPA1LP34931 641 aa17.93■□□□□ 0.46
LDLRAD4-210ENST00000587600 MTHFSP49914 203 aa17.93■□□□□ 0.46
LDLRAD4-210ENST00000587600 HAP1P54257 671 aaPredicted RBP17.93■□□□□ 0.46
LDLRAD4-210ENST00000587600 ARHGEF25Q86VW2 580 aa17.93■□□□□ 0.46
LDLRAD4-210ENST00000587600 FLT4P35916 1363 aa17.92■□□□□ 0.46
LDLRAD4-210ENST00000587600 MAP3K19Q56UN5 1328 aa17.92■□□□□ 0.46
LDLRAD4-210ENST00000587600 RRS1Q15050 365 aaKnown RBP17.9■□□□□ 0.46
LDLRAD4-210ENST00000587600 BLMP54132 1417 aaPredicted RBP17.89■□□□□ 0.46
LDLRAD4-210ENST00000587600 ABCA3Q99758 1704 aa17.89■□□□□ 0.46
LDLRAD4-210ENST00000587600 SOX12O15370 315 aa17.89■□□□□ 0.45
LDLRAD4-210ENST00000587600 AMPHP49418 695 aa17.89■□□□□ 0.45
LDLRAD4-210ENST00000587600 CABLES1Q8TDN4 633 aa17.89■□□□□ 0.45
LDLRAD4-210ENST00000587600 IP6K1Q92551 441 aa17.89■□□□□ 0.45
LDLRAD4-210ENST00000587600 MRS2Q9HD23 443 aa17.89■□□□□ 0.45
LDLRAD4-210ENST00000587600 EMILIN1Q9Y6C2 1016 aa17.89■□□□□ 0.45
LDLRAD4-210ENST00000587600 HOXC9P31274 260 aa17.87■□□□□ 0.45
LDLRAD4-210ENST00000587600 KIAA0232Q92628 1395 aa17.87■□□□□ 0.45
LDLRAD4-210ENST00000587600 PPM1GO15355 546 aaPredicted RBP17.86■□□□□ 0.45
LDLRAD4-210ENST00000587600 FBLN1P23142 703 aa17.86■□□□□ 0.45
LDLRAD4-210ENST00000587600 PRDM11Q9NQV5 511 aa17.86■□□□□ 0.45
LDLRAD4-210ENST00000587600 NUDCQ9Y266 331 aa17.86■□□□□ 0.45
LDLRAD4-210ENST00000587600 DIAPH1O60610 1272 aaKnown RBP17.85■□□□□ 0.45
LDLRAD4-210ENST00000587600 COL3A1P02461 1466 aaPredicted RBP17.85■□□□□ 0.45
LDLRAD4-210ENST00000587600 MAP2P11137 1827 aaKnown RBP17.85■□□□□ 0.45
LDLRAD4-210ENST00000587600 ZC3H6P61129 1189 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms