RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 IFT172Q9UG01 1749 aa12.18□□□□□ -0.46
NEDD4L-218ENST00000587547 FOXO3O43524 673 aa12.18□□□□□ -0.46
NEDD4L-218ENST00000587547 EN1Q05925 392 aaPredicted RBP12.18□□□□□ -0.46
NEDD4L-218ENST00000587547 ESCO1Q5FWF5 840 aa12.18□□□□□ -0.46
NEDD4L-218ENST00000587547 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.18□□□□□ -0.46
NEDD4L-218ENST00000587547 NEXMIFQ5QGS0 1516 aa12.17□□□□□ -0.46
NEDD4L-218ENST00000587547 CLSPNQ9HAW4 1339 aa12.17□□□□□ -0.46
NEDD4L-218ENST00000587547 VPS72Q15906 364 aa12.17□□□□□ -0.46
NEDD4L-218ENST00000587547 USP32Q8NFA0 1604 aa12.16□□□□□ -0.46
NEDD4L-218ENST00000587547 ONECUT3O60422 494 aaPredicted RBP12.16□□□□□ -0.46
NEDD4L-218ENST00000587547 PRAG1Q86YV5 1406 aa12.15□□□□□ -0.46
NEDD4L-218ENST00000587547 RGL3Q3MIN7 710 aa12.15□□□□□ -0.46
NEDD4L-218ENST00000587547 CLEC11AQ9Y240 323 aa12.15□□□□□ -0.46
NEDD4L-218ENST00000587547 CCDC9Q9Y3X0 531 aaKnown RBP12.15□□□□□ -0.46
NEDD4L-218ENST00000587547 FAM182BQ5T319 152 aa12.14□□□□□ -0.47
NEDD4L-218ENST00000587547 CDC42BPGQ6DT37 1551 aa12.13□□□□□ -0.47
NEDD4L-218ENST00000587547 SPATA31A3Q5VYP0 1347 aa12.13□□□□□ -0.47
NEDD4L-218ENST00000587547 SPATA31E1Q6ZUB1 1445 aa12.13□□□□□ -0.47
NEDD4L-218ENST00000587547 A0A0G2JS52 829 aa12.13□□□□□ -0.47
NEDD4L-218ENST00000587547 NUTM2FA1L443 756 aa12.13□□□□□ -0.47
NEDD4L-218ENST00000587547 MYT1Q01538 1121 aa12.13□□□□□ -0.47
NEDD4L-218ENST00000587547 TONSLQ96HA7 1378 aa12.13□□□□□ -0.47
NEDD4L-218ENST00000587547 REM2Q8IYK8 340 aaPredicted RBP12.12□□□□□ -0.47
NEDD4L-218ENST00000587547 PLCH1Q4KWH8 1693 aa12.12□□□□□ -0.47
NEDD4L-218ENST00000587547 PRR29P0C7W0 189 aa12.11□□□□□ -0.47
NEDD4L-218ENST00000587547 NUBP1P53384 320 aa12.11□□□□□ -0.47
NEDD4L-218ENST00000587547 EZH2Q15910 746 aaKnown RBP12.11□□□□□ -0.47
NEDD4L-218ENST00000587547 PAXIP1Q6ZW49 1069 aaPredicted RBP12.11□□□□□ -0.47
NEDD4L-218ENST00000587547 CABLES1Q8TDN4 633 aa12.11□□□□□ -0.47
NEDD4L-218ENST00000587547 DISP2A7MBM2 1401 aa12.11□□□□□ -0.47
NEDD4L-218ENST00000587547 LRPPRCP42704 1394 aaKnown RBP12.1□□□□□ -0.47
NEDD4L-218ENST00000587547 GSE1Q14687 1217 aa12.1□□□□□ -0.47
NEDD4L-218ENST00000587547 FAM98CQ17RN3 349 aaKnown RBP12.1□□□□□ -0.47
NEDD4L-218ENST00000587547 RGPD1P0DJD0 1748 aa12.09□□□□□ -0.47
NEDD4L-218ENST00000587547 TNS1Q9HBL0 1735 aaKnown RBP12.09□□□□□ -0.47
NEDD4L-218ENST00000587547 NWD2Q9ULI1 1742 aa12.09□□□□□ -0.47
NEDD4L-218ENST00000587547 CFAP44Q96MT7 982 aa12.09□□□□□ -0.47
NEDD4L-218ENST00000587547 CREBZFQ9NS37 354 aa12.09□□□□□ -0.47
NEDD4L-218ENST00000587547 KDM2AQ9Y2K7 1162 aa12.09□□□□□ -0.47
NEDD4L-218ENST00000587547 IFFO2Q5TF58 517 aa12.08□□□□□ -0.48
NEDD4L-218ENST00000587547 VSIG10Q8N0Z9 540 aa12.08□□□□□ -0.48
NEDD4L-218ENST00000587547 DCAF11Q8TEB1 546 aa12.08□□□□□ -0.48
NEDD4L-218ENST00000587547 L3MBTL2Q969R5 705 aa12.08□□□□□ -0.48
NEDD4L-218ENST00000587547 FAM83GA6ND36 823 aa12.07□□□□□ -0.48
NEDD4L-218ENST00000587547 TNS3Q68CZ2 1445 aa12.07□□□□□ -0.48
NEDD4L-218ENST00000587547 CAMKK2Q96RR4 588 aa12.07□□□□□ -0.48
NEDD4L-218ENST00000587547 KRT28Q7Z3Y7 464 aa12.06□□□□□ -0.48
NEDD4L-218ENST00000587547 RPGRIP1LQ68CZ1 1315 aa12.06□□□□□ -0.48
NEDD4L-218ENST00000587547 NRAPQ86VF7 1730 aa12.06□□□□□ -0.48
NEDD4L-218ENST00000587547 ABCA3Q99758 1704 aa12.06□□□□□ -0.48
NEDD4L-218ENST00000587547 WAPLQ7Z5K2 1190 aa12.05□□□□□ -0.48
NEDD4L-218ENST00000587547 PLEKHH1Q9ULM0 1364 aa12.05□□□□□ -0.48
NEDD4L-218ENST00000587547 SENP3-EIF4A1A0A087X0R7 540 aa12.04□□□□□ -0.48
NEDD4L-218ENST00000587547 VGFO15240 615 aaPredicted RBP12.04□□□□□ -0.48
NEDD4L-218ENST00000587547 MNX1P50219 401 aaPredicted RBP12.04□□□□□ -0.48
NEDD4L-218ENST00000587547 DCAF8Q5TAQ9 597 aa12.04□□□□□ -0.48
NEDD4L-218ENST00000587547 ZNF784Q8NCA9 323 aaPredicted RBP12.04□□□□□ -0.48
NEDD4L-218ENST00000587547 CAMTA1Q9Y6Y1 1673 aa12.03□□□□□ -0.48
NEDD4L-218ENST00000587547 TRIM37O94972 964 aa12.03□□□□□ -0.48
NEDD4L-218ENST00000587547 TRPM1Q7Z4N2 1603 aa12.03□□□□□ -0.48
NEDD4L-218ENST00000587547 KIF1AQ12756 1690 aa12.03□□□□□ -0.48
NEDD4L-218ENST00000587547 KIAA1210Q9ULL0 1709 aa12.03□□□□□ -0.48
NEDD4L-218ENST00000587547 ADGRB2O60241 1585 aa12.02□□□□□ -0.49
NEDD4L-218ENST00000587547 LMOD2Q6P5Q4 547 aa12.02□□□□□ -0.49
NEDD4L-218ENST00000587547 SPRYD3Q8NCJ5 442 aa12.02□□□□□ -0.49
NEDD4L-218ENST00000587547 RNF25Q96BH1 459 aaPredicted RBP12.02□□□□□ -0.49
NEDD4L-218ENST00000587547 BTG4Q9NY30 223 aa12.02□□□□□ -0.49
NEDD4L-218ENST00000587547 PPP1R1BQ9UD71 204 aaPredicted RBP12.02□□□□□ -0.49
NEDD4L-218ENST00000587547 TIMELESSQ9UNS1 1208 aa12.02□□□□□ -0.49
NEDD4L-218ENST00000587547 THSD7AQ9UPZ6 1657 aa12.02□□□□□ -0.49
NEDD4L-218ENST00000587547 ADGRF5Q8IZF2 1346 aa12.02□□□□□ -0.49
NEDD4L-218ENST00000587547 FMN2Q9NZ56 1722 aa12.02□□□□□ -0.49
NEDD4L-218ENST00000587547 NINLQ9Y2I6 1382 aa12.02□□□□□ -0.49
NEDD4L-218ENST00000587547 STK26Q9P289 416 aa12.01□□□□□ -0.49
NEDD4L-218ENST00000587547 TECPR2O15040 1411 aa12.01□□□□□ -0.49
NEDD4L-218ENST00000587547 APBA3O96018 575 aa12□□□□□ -0.49
NEDD4L-218ENST00000587547 SPATA31A5Q5VU36 1347 aa12□□□□□ -0.49
NEDD4L-218ENST00000587547 SPATA31A7Q8IWB4 1347 aa12□□□□□ -0.49
NEDD4L-218ENST00000587547 SBNO1A3KN83 1393 aa12□□□□□ -0.49
NEDD4L-218ENST00000587547 PARD3Q8TEW0 1356 aa12□□□□□ -0.49
NEDD4L-218ENST00000587547 NRXN1Q9ULB1 1477 aa12□□□□□ -0.49
NEDD4L-218ENST00000587547 RREB1Q92766 1687 aa12□□□□□ -0.49
NEDD4L-218ENST00000587547 NUP188Q5SRE5 1749 aa12□□□□□ -0.49
NEDD4L-218ENST00000587547 ZEB1P37275 1124 aaPredicted RBP11.99□□□□□ -0.49
NEDD4L-218ENST00000587547 SPON1Q9HCB6 807 aa11.99□□□□□ -0.49
NEDD4L-218ENST00000587547 PHF8Q9UPP1 1060 aa11.99□□□□□ -0.49
NEDD4L-218ENST00000587547 ARHGEF10O15013 1369 aa11.99□□□□□ -0.49
NEDD4L-218ENST00000587547 PIK3C2GO75747 1445 aa11.99□□□□□ -0.49
NEDD4L-218ENST00000587547 PITPNM1O00562 1244 aa11.98□□□□□ -0.49
NEDD4L-218ENST00000587547 KCNQ2O43526 872 aa11.98□□□□□ -0.49
NEDD4L-218ENST00000587547 PSME1Q06323 249 aa11.98□□□□□ -0.49
NEDD4L-218ENST00000587547 NBPF8Q3BBV2 869 aa11.98□□□□□ -0.49
NEDD4L-218ENST00000587547 FAM212AQ96EL1 285 aa11.98□□□□□ -0.49
NEDD4L-218ENST00000587547 STAC3Q96MF2 364 aa11.98□□□□□ -0.49
NEDD4L-218ENST00000587547 C1QTNF8P60827 252 aa11.97□□□□□ -0.49
NEDD4L-218ENST00000587547 FAM196AQ6ZSG2 479 aa11.97□□□□□ -0.49
NEDD4L-218ENST00000587547 HS6ST3Q8IZP7 471 aa11.97□□□□□ -0.49
NEDD4L-218ENST00000587547 COL14A1Q05707 1796 aaKnown RBP11.96□□□□□ -0.49
NEDD4L-218ENST00000587547 UTRNP46939 3433 aa11.95□□□□□ -0.5
NEDD4L-218ENST00000587547 RGPD8O14715 1765 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms