RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 CABP2Q9NPB3 220 aa16.56■□□□□ 0.24
PRKCSH-206ENST00000587509 USP21Q9UK80 565 aa16.56■□□□□ 0.24
PRKCSH-206ENST00000587509 ACEP12821 1306 aa16.55■□□□□ 0.24
PRKCSH-206ENST00000587509 TRPC5Q9UL62 973 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-206ENST00000587509 FNBP4Q8N3X1 1017 aaPredicted RBP16.54■□□□□ 0.24
PRKCSH-206ENST00000587509 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.53■□□□□ 0.24
PRKCSH-206ENST00000587509 RBM6P78332 1123 aaKnown RBP16.53■□□□□ 0.24
PRKCSH-206ENST00000587509 QTRT2Q9H974 415 aaKnown RBP16.52■□□□□ 0.24
PRKCSH-206ENST00000587509 USP6P35125 1406 aa16.51■□□□□ 0.23
PRKCSH-206ENST00000587509 NWD2Q9ULI1 1742 aa16.5■□□□□ 0.23
PRKCSH-206ENST00000587509 SLIT2O94813 1529 aa16.5■□□□□ 0.23
PRKCSH-206ENST00000587509 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
PRKCSH-206ENST00000587509 ATRNO75882 1429 aa16.5■□□□□ 0.23
PRKCSH-206ENST00000587509 USP47Q96K76 1375 aa16.5■□□□□ 0.23
PRKCSH-206ENST00000587509 NINLQ9Y2I6 1382 aa16.5■□□□□ 0.23
PRKCSH-206ENST00000587509 CABLES1Q8TDN4 633 aa16.49■□□□□ 0.23
PRKCSH-206ENST00000587509 ZNF692Q9BU19 519 aaPredicted RBP16.49■□□□□ 0.23
PRKCSH-206ENST00000587509 CABP1Q9NZU7 370 aa16.49■□□□□ 0.23
PRKCSH-206ENST00000587509 PLCH1Q4KWH8 1693 aa16.49■□□□□ 0.23
PRKCSH-206ENST00000587509 UNC5CLQ8IV45 518 aa16.48■□□□□ 0.23
PRKCSH-206ENST00000587509 ABTB2Q8N961 1025 aa16.48■□□□□ 0.23
PRKCSH-206ENST00000587509 PUS7Q96PZ0 661 aaKnown RBP16.48■□□□□ 0.23
PRKCSH-206ENST00000587509 COL14A1Q05707 1796 aaKnown RBP16.48■□□□□ 0.23
PRKCSH-206ENST00000587509 PHRF1Q9P1Y6 1649 aaKnown RBP16.48■□□□□ 0.23
PRKCSH-206ENST00000587509 NLRP13Q86W25 1043 aa16.47■□□□□ 0.23
PRKCSH-206ENST00000587509 PRDM11Q9NQV5 511 aa16.47■□□□□ 0.23
PRKCSH-206ENST00000587509 CRYBG1Q9Y4K1 1723 aa16.47■□□□□ 0.23
PRKCSH-206ENST00000587509 BCL9LQ86UU0 1499 aa16.47■□□□□ 0.23
PRKCSH-206ENST00000587509 CDCA8Q53HL2 280 aa16.46■□□□□ 0.23
PRKCSH-206ENST00000587509 RGS12O14924 1447 aa16.45■□□□□ 0.22
PRKCSH-206ENST00000587509 HDGFL2Q7Z4V5 671 aaPredicted RBP16.45■□□□□ 0.22
PRKCSH-206ENST00000587509 TTC21AQ8NDW8 1320 aa16.45■□□□□ 0.22
PRKCSH-206ENST00000587509 AKAP12Q02952 1782 aa16.44■□□□□ 0.22
PRKCSH-206ENST00000587509 NRKQ7Z2Y5 1582 aa16.44■□□□□ 0.22
PRKCSH-206ENST00000587509 KTN1Q86UP2 1357 aaKnown RBP16.44■□□□□ 0.22
PRKCSH-206ENST00000587509 ST20-MTHFSA0A0A6YYL1 179 aa16.44■□□□□ 0.22
PRKCSH-206ENST00000587509 TMF1P82094 1093 aa16.44■□□□□ 0.22
PRKCSH-206ENST00000587509 TERF2IPQ9NYB0 399 aa16.44■□□□□ 0.22
PRKCSH-206ENST00000587509 USP19O94966 1318 aa16.44■□□□□ 0.22
PRKCSH-206ENST00000587509 TMC1Q8TDI8 760 aa16.43■□□□□ 0.22
PRKCSH-206ENST00000587509 CCDC9Q9Y3X0 531 aaKnown RBP16.43■□□□□ 0.22
PRKCSH-206ENST00000587509 VPS72Q15906 364 aa16.42■□□□□ 0.22
PRKCSH-206ENST00000587509 GJD4Q96KN9 370 aaPredicted RBP16.42■□□□□ 0.22
PRKCSH-206ENST00000587509 CPSF1Q10570 1443 aaKnown RBP16.42■□□□□ 0.22
PRKCSH-206ENST00000587509 MON2Q7Z3U7 1717 aa16.42■□□□□ 0.22
PRKCSH-206ENST00000587509 CPDO75976 1380 aa16.41■□□□□ 0.22
PRKCSH-206ENST00000587509 KIAA0232Q92628 1395 aa16.41■□□□□ 0.22
PRKCSH-206ENST00000587509 NUTM2GQ5VZR2 741 aa16.41■□□□□ 0.22
PRKCSH-206ENST00000587509 SSH2Q76I76 1423 aa16.4■□□□□ 0.22
PRKCSH-206ENST00000587509 NLRP6P59044 892 aa16.4■□□□□ 0.22
PRKCSH-206ENST00000587509 TESK2Q96S53 571 aa16.4■□□□□ 0.22
PRKCSH-206ENST00000587509 BTG4Q9NY30 223 aa16.4■□□□□ 0.22
PRKCSH-206ENST00000587509 PIK3C2AO00443 1686 aa16.4■□□□□ 0.22
PRKCSH-206ENST00000587509 SLIT3O75094 1523 aa16.4■□□□□ 0.22
PRKCSH-206ENST00000587509 NRAPQ86VF7 1730 aa16.39■□□□□ 0.21
PRKCSH-206ENST00000587509 EDC4Q6P2E9 1401 aaKnown RBP16.39■□□□□ 0.21
PRKCSH-206ENST00000587509 FAM83GA6ND36 823 aa16.39■□□□□ 0.21
PRKCSH-206ENST00000587509 KCNH5Q8NCM2 988 aa16.39■□□□□ 0.21
PRKCSH-206ENST00000587509 TTC21BQ7Z4L5 1316 aa16.39■□□□□ 0.21
PRKCSH-206ENST00000587509 GCP02774 474 aa16.37■□□□□ 0.21
PRKCSH-206ENST00000587509 ZC3H6P61129 1189 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-206ENST00000587509 GLI3P10071 1580 aa16.37■□□□□ 0.21
PRKCSH-206ENST00000587509 A0A1W2PP64 1363 aa16.36■□□□□ 0.21
PRKCSH-206ENST00000587509 A0A0G2JS52 829 aa16.35■□□□□ 0.21
PRKCSH-206ENST00000587509 MYT1Q01538 1121 aa16.35■□□□□ 0.21
PRKCSH-206ENST00000587509 ANKRD36BQ8N2N9 1353 aa16.35■□□□□ 0.21
PRKCSH-206ENST00000587509 CD163L1Q9NR16 1453 aa16.35■□□□□ 0.21
PRKCSH-206ENST00000587509 ABCC6O95255 1503 aa16.35■□□□□ 0.21
PRKCSH-206ENST00000587509 USP54Q70EL1 1684 aa16.34■□□□□ 0.21
PRKCSH-206ENST00000587509 EVA1CP58658 441 aa16.33■□□□□ 0.2
PRKCSH-206ENST00000587509 EIF4G2P78344 907 aaKnown RBP eCLIP16.33■□□□□ 0.2
PRKCSH-206ENST00000587509 CHRNA2Q15822 529 aa16.33■□□□□ 0.2
PRKCSH-206ENST00000587509 SLC12A5Q9H2X9 1139 aa16.33■□□□□ 0.2
PRKCSH-206ENST00000587509 AATKQ6ZMQ8 1374 aa16.32■□□□□ 0.2
PRKCSH-206ENST00000587509 USP31Q70CQ4 1352 aa16.32■□□□□ 0.2
PRKCSH-206ENST00000587509 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.32■□□□□ 0.2
PRKCSH-206ENST00000587509 LMO7Q8WWI1 1683 aa16.32■□□□□ 0.2
PRKCSH-206ENST00000587509 STRN4Q9NRL3 753 aa16.32■□□□□ 0.2
PRKCSH-206ENST00000587509 SPATA31A5Q5VU36 1347 aa16.31■□□□□ 0.2
PRKCSH-206ENST00000587509 SPATA31A7Q8IWB4 1347 aa16.31■□□□□ 0.2
PRKCSH-206ENST00000587509 ZBTB7CA1YPR0 619 aa16.31■□□□□ 0.2
PRKCSH-206ENST00000587509 SEPT12Q8IYM1 358 aa16.3■□□□□ 0.2
PRKCSH-206ENST00000587509 COL5A2P05997 1499 aaPredicted RBP16.29■□□□□ 0.2
PRKCSH-206ENST00000587509 UPF1Q92900 1129 aaKnown RBP eCLIP16.29■□□□□ 0.2
PRKCSH-206ENST00000587509 NFAT5O94916 1531 aa16.29■□□□□ 0.2
PRKCSH-206ENST00000587509 CAMTA1Q9Y6Y1 1673 aa16.28■□□□□ 0.2
PRKCSH-206ENST00000587509 SPATA31A1Q5TZJ5 1347 aa16.28■□□□□ 0.2
PRKCSH-206ENST00000587509 FAM98CQ17RN3 349 aaKnown RBP16.28■□□□□ 0.2
PRKCSH-206ENST00000587509 OVOS2A0A0J9YW53 1432 aa16.28■□□□□ 0.2
PRKCSH-206ENST00000587509 CRB1P82279 1406 aa16.28■□□□□ 0.2
PRKCSH-206ENST00000587509 OVOS2Q6IE36 1432 aa16.28■□□□□ 0.2
PRKCSH-206ENST00000587509 SOX12O15370 315 aa16.27■□□□□ 0.2
PRKCSH-206ENST00000587509 ONECUT3O60422 494 aaPredicted RBP16.27■□□□□ 0.2
PRKCSH-206ENST00000587509 THRAP3Q9Y2W1 955 aaKnown RBP16.27■□□□□ 0.2
PRKCSH-206ENST00000587509 KRT27Q7Z3Y8 459 aa16.26■□□□□ 0.19
PRKCSH-206ENST00000587509 NME9Q86XW9 330 aa16.26■□□□□ 0.19
PRKCSH-206ENST00000587509 CCDC125Q86Z20 511 aa16.26■□□□□ 0.19
PRKCSH-206ENST00000587509 COG3Q96JB2 828 aa16.26■□□□□ 0.19
PRKCSH-206ENST00000587509 THSD7AQ9UPZ6 1657 aa16.26■□□□□ 0.19
PRKCSH-206ENST00000587509 ARHGEF25Q86VW2 580 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms