RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 TTC21BQ7Z4L5 1316 aa26.34■■□□□ 1.81
TRIM47-204ENST00000587339 NGDNQ8NEJ9 315 aaKnown RBP26.34■■□□□ 1.81
TRIM47-204ENST00000587339 NUDCQ9Y266 331 aa26.34■■□□□ 1.81
TRIM47-204ENST00000587339 NRKQ7Z2Y5 1582 aa26.34■■□□□ 1.81
TRIM47-204ENST00000587339 PDE3BQ13370 1112 aa26.33■■□□□ 1.81
TRIM47-204ENST00000587339 CCDC146Q8IYE0 955 aa26.33■■□□□ 1.81
TRIM47-204ENST00000587339 SUPT16HQ9Y5B9 1047 aaKnown RBP26.33■■□□□ 1.81
TRIM47-204ENST00000587339 RGPD8O14715 1765 aaPredicted RBP26.33■■□□□ 1.81
TRIM47-204ENST00000587339 NEFLP07196 543 aa26.31■■□□□ 1.8
TRIM47-204ENST00000587339 C14orf37Q86TY3 774 aa26.31■■□□□ 1.8
TRIM47-204ENST00000587339 ZRANB1Q9UGI0 708 aa26.31■■□□□ 1.8
TRIM47-204ENST00000587339 SSH2Q76I76 1423 aa26.29■■□□□ 1.8
TRIM47-204ENST00000587339 POLKQ9UBT6 870 aa26.29■■□□□ 1.8
TRIM47-204ENST00000587339 LMTK3Q96Q04 1460 aa26.28■■□□□ 1.8
TRIM47-204ENST00000587339 PROSER2Q86WR7 435 aaPredicted RBP26.28■■□□□ 1.8
TRIM47-204ENST00000587339 PNPLA6Q8IY17 1366 aa26.28■■□□□ 1.8
TRIM47-204ENST00000587339 AATKQ6ZMQ8 1374 aa26.27■■□□□ 1.8
TRIM47-204ENST00000587339 COL3A1P02461 1466 aaPredicted RBP26.27■■□□□ 1.8
TRIM47-204ENST00000587339 APAF1O14727 1248 aa26.27■■□□□ 1.8
TRIM47-204ENST00000587339 FBLN1P23142 703 aa26.27■■□□□ 1.8
TRIM47-204ENST00000587339 TTC21AQ8NDW8 1320 aa26.26■■□□□ 1.8
TRIM47-204ENST00000587339 PPM1GO15355 546 aaPredicted RBP26.26■■□□□ 1.79
TRIM47-204ENST00000587339 U2AF1L5P0DN76 240 aaPredicted RBP26.26■■□□□ 1.79
TRIM47-204ENST00000587339 U2AF1Q01081 240 aaKnown RBP eCLIP26.26■■□□□ 1.79
TRIM47-204ENST00000587339 FKBP8Q14318 412 aa26.26■■□□□ 1.79
TRIM47-204ENST00000587339 DIAPH1O60610 1272 aaKnown RBP26.24■■□□□ 1.79
TRIM47-204ENST00000587339 RUNDC1Q96C34 613 aa26.24■■□□□ 1.79
TRIM47-204ENST00000587339 OVOS2A0A0J9YW53 1432 aa26.23■■□□□ 1.79
TRIM47-204ENST00000587339 OVOS2Q6IE36 1432 aa26.23■■□□□ 1.79
TRIM47-204ENST00000587339 NGEFQ8N5V2 710 aa26.23■■□□□ 1.79
TRIM47-204ENST00000587339 MAP2P11137 1827 aaKnown RBP26.22■■□□□ 1.79
TRIM47-204ENST00000587339 U2SURPO15042 1029 aaKnown RBP26.22■■□□□ 1.79
TRIM47-204ENST00000587339 CDCA7LQ96GN5 454 aa26.22■■□□□ 1.79
TRIM47-204ENST00000587339 PHF8Q9UPP1 1060 aa26.22■■□□□ 1.79
TRIM47-204ENST00000587339 EMILIN1Q9Y6C2 1016 aa26.22■■□□□ 1.79
TRIM47-204ENST00000587339 ZNF521Q96K83 1311 aa26.21■■□□□ 1.79
TRIM47-204ENST00000587339 ESCO1Q5FWF5 840 aa26.19■■□□□ 1.78
TRIM47-204ENST00000587339 RRS1Q15050 365 aaKnown RBP26.18■■□□□ 1.78
TRIM47-204ENST00000587339 C19orf44Q9H6X5 657 aa26.18■■□□□ 1.78
TRIM47-204ENST00000587339 CDK12Q9NYV4 1490 aaPredicted RBP26.18■■□□□ 1.78
TRIM47-204ENST00000587339 GOLGA2Q08379 1002 aa26.16■■□□□ 1.78
TRIM47-204ENST00000587339 USP31Q70CQ4 1352 aa26.16■■□□□ 1.78
TRIM47-204ENST00000587339 TCP11L2Q8N4U5 519 aa26.16■■□□□ 1.78
TRIM47-204ENST00000587339 TMEM94Q12767 1356 aa26.15■■□□□ 1.78
TRIM47-204ENST00000587339 IQSEC2Q5JU85 1478 aa26.14■■□□□ 1.78
TRIM47-204ENST00000587339 STRCP1A6NGW2 1772 aa26.14■■□□□ 1.77
TRIM47-204ENST00000587339 STRCQ7RTU9 1775 aa26.13■■□□□ 1.77
TRIM47-204ENST00000587339 PIK3C2AO00443 1686 aa26.13■■□□□ 1.77
TRIM47-204ENST00000587339 PAK3O75914 559 aaPredicted RBP26.12■■□□□ 1.77
TRIM47-204ENST00000587339 NCOA3Q9Y6Q9 1424 aa26.12■■□□□ 1.77
TRIM47-204ENST00000587339 NLRP6P59044 892 aa26.11■■□□□ 1.77
TRIM47-204ENST00000587339 PNNQ9H307 717 aaKnown RBP26.11■■□□□ 1.77
TRIM47-204ENST00000587339 PSME1Q06323 249 aa26.1■■□□□ 1.77
TRIM47-204ENST00000587339 NEUROD2Q15784 382 aa26.1■■□□□ 1.77
TRIM47-204ENST00000587339 ABTB2Q8N961 1025 aa26.1■■□□□ 1.77
TRIM47-204ENST00000587339 PLEKHF1Q96S99 279 aa26.1■■□□□ 1.77
TRIM47-204ENST00000587339 ORAI2Q96SN7 254 aa26.1■■□□□ 1.77
TRIM47-204ENST00000587339 RRP7AQ9Y3A4 280 aaKnown RBP26.1■■□□□ 1.77
TRIM47-204ENST00000587339 SOX12O15370 315 aa26.09■■□□□ 1.77
TRIM47-204ENST00000587339 IL13P35225 146 aa26.09■■□□□ 1.77
TRIM47-204ENST00000587339 WWC1Q8IX03 1113 aa26.09■■□□□ 1.77
TRIM47-204ENST00000587339 ATF3P18847 181 aa26.08■■□□□ 1.77
TRIM47-204ENST00000587339 IRX6P78412 446 aaPredicted RBP26.08■■□□□ 1.77
TRIM47-204ENST00000587339 MAPK8IP3Q9UPT6 1336 aa26.08■■□□□ 1.77
TRIM47-204ENST00000587339 FCHSD2O94868 740 aa26.08■■□□□ 1.76
TRIM47-204ENST00000587339 RCAN3Q9UKA8 241 aa26.08■■□□□ 1.76
TRIM47-204ENST00000587339 SLFN5Q08AF3 891 aa26.07■■□□□ 1.76
TRIM47-204ENST00000587339 NCBP3Q53F19 620 aaKnown RBP26.07■■□□□ 1.76
TRIM47-204ENST00000587339 DUSP27Q5VZP5 1158 aa26.07■■□□□ 1.76
TRIM47-204ENST00000587339 DCCP43146 1447 aa26.07■■□□□ 1.76
TRIM47-204ENST00000587339 C1orf167Q5SNV9 1468 aa26.07■■□□□ 1.76
TRIM47-204ENST00000587339 RNF123Q5XPI4 1314 aa26.06■■□□□ 1.76
TRIM47-204ENST00000587339 CCDC27Q2M243 656 aa26.06■■□□□ 1.76
TRIM47-204ENST00000587339 NUTM2GQ5VZR2 741 aa26.06■■□□□ 1.76
TRIM47-204ENST00000587339 FOXO3O43524 673 aa26.05■■□□□ 1.76
TRIM47-204ENST00000587339 E9PSI1 815 aa26.04■■□□□ 1.76
TRIM47-204ENST00000587339 PHF23Q9BUL5 403 aaPredicted RBP26.04■■□□□ 1.76
TRIM47-204ENST00000587339 RSPH6AQ9H0K4 717 aa26.03■■□□□ 1.76
TRIM47-204ENST00000587339 MAP3K19Q56UN5 1328 aa26.03■■□□□ 1.76
TRIM47-204ENST00000587339 USP54Q70EL1 1684 aa26.03■■□□□ 1.76
TRIM47-204ENST00000587339 TRMT2AQ8IZ69 625 aaKnown RBP26.02■■□□□ 1.76
TRIM47-204ENST00000587339 LRRC7Q96NW7 1537 aa26.02■■□□□ 1.76
TRIM47-204ENST00000587339 NEFMP07197 916 aa26.02■■□□□ 1.76
TRIM47-204ENST00000587339 CADPS2Q86UW7 1296 aa26.02■■□□□ 1.76
TRIM47-204ENST00000587339 SPINK5Q9NQ38 1064 aaPredicted RBP26.02■■□□□ 1.76
TRIM47-204ENST00000587339 HMOX1P09601 288 aa26.01■■□□□ 1.75
TRIM47-204ENST00000587339 PRKAR2BP31323 418 aa26.01■■□□□ 1.75
TRIM47-204ENST00000587339 MSH6P52701 1360 aa26.01■■□□□ 1.75
TRIM47-204ENST00000587339 MST1RQ04912 1400 aa26.01■■□□□ 1.75
TRIM47-204ENST00000587339 DMRT2Q9Y5R5 561 aa26.01■■□□□ 1.75
TRIM47-204ENST00000587339 TMPOP42166 694 aaKnown RBP26■■□□□ 1.75
TRIM47-204ENST00000587339 HSP90AB2PQ58FF8 381 aa26■■□□□ 1.75
TRIM47-204ENST00000587339 ERICH6BQ5W0A0 696 aa26■■□□□ 1.75
TRIM47-204ENST00000587339 PEAK1Q9H792 1746 aa26■■□□□ 1.75
TRIM47-204ENST00000587339 KIF1AQ12756 1690 aa26■■□□□ 1.75
TRIM47-204ENST00000587339 SBNO1A3KN83 1393 aa26■■□□□ 1.75
TRIM47-204ENST00000587339 EIF4A2Q14240 407 aaKnown RBP26■■□□□ 1.75
TRIM47-204ENST00000587339 MARF1Q9Y4F3 1742 aaKnown RBP26■■□□□ 1.75
TRIM47-204ENST00000587339 FLT4P35916 1363 aa25.99■■□□□ 1.75
TRIM47-204ENST00000587339 WDR63Q8IWG1 891 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms