RNA–Protein interactions for RNA: ENST00000586988.5

DNMT1-211, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-211ENST00000586988 ANP32CO43423 234 aa16.11■□□□□ 0.17
DNMT1-211ENST00000586988 BRINP3Q76B58 766 aa16.11■□□□□ 0.17
DNMT1-211ENST00000586988 TTC21AQ8NDW8 1320 aa16.11■□□□□ 0.17
DNMT1-211ENST00000586988 SSH2Q76I76 1423 aa16.11■□□□□ 0.17
DNMT1-211ENST00000586988 TRPM3Q9HCF6 1732 aaPredicted RBP16.1■□□□□ 0.17
DNMT1-211ENST00000586988 AHDC1Q5TGY3 1603 aaPredicted RBP16.09■□□□□ 0.17
DNMT1-211ENST00000586988 PSME1Q06323 249 aa16.09■□□□□ 0.17
DNMT1-211ENST00000586988 AMER1Q5JTC6 1135 aaPredicted RBP16.09■□□□□ 0.17
DNMT1-211ENST00000586988 USP54Q70EL1 1684 aa16.08■□□□□ 0.17
DNMT1-211ENST00000586988 TTC21BQ7Z4L5 1316 aa16.08■□□□□ 0.16
DNMT1-211ENST00000586988 PXDNQ92626 1479 aa16.08■□□□□ 0.16
DNMT1-211ENST00000586988 PIK3C2AO00443 1686 aa16.08■□□□□ 0.16
DNMT1-211ENST00000586988 FOXO3O43524 673 aa16.07■□□□□ 0.16
DNMT1-211ENST00000586988 SBNO1A3KN83 1393 aa16.07■□□□□ 0.16
DNMT1-211ENST00000586988 PARD3Q8TEW0 1356 aa16.06■□□□□ 0.16
DNMT1-211ENST00000586988 UBAP1LF5GYI3 381 aa16.06■□□□□ 0.16
DNMT1-211ENST00000586988 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.06■□□□□ 0.16
DNMT1-211ENST00000586988 ALS2Q96Q42 1657 aa16.05■□□□□ 0.16
DNMT1-211ENST00000586988 TNS3Q68CZ2 1445 aa16.05■□□□□ 0.16
DNMT1-211ENST00000586988 RALBP1Q15311 655 aa16.05■□□□□ 0.16
DNMT1-211ENST00000586988 OVOS2A0A0J9YW53 1432 aa16.04■□□□□ 0.16
DNMT1-211ENST00000586988 OVOS2Q6IE36 1432 aa16.04■□□□□ 0.16
DNMT1-211ENST00000586988 CC2D1BQ5T0F9 858 aaKnown RBP16.04■□□□□ 0.16
DNMT1-211ENST00000586988 KRT28Q7Z3Y7 464 aa16.04■□□□□ 0.16
DNMT1-211ENST00000586988 PRKRIP1Q9H875 184 aaPredicted RBP16.04■□□□□ 0.16
DNMT1-211ENST00000586988 USP31Q70CQ4 1352 aa16.03■□□□□ 0.16
DNMT1-211ENST00000586988 FYB1O15117 783 aa16.03■□□□□ 0.16
DNMT1-211ENST00000586988 PAK3O75914 559 aaPredicted RBP16.03■□□□□ 0.16
DNMT1-211ENST00000586988 ARHGEF10O15013 1369 aa16.02■□□□□ 0.16
DNMT1-211ENST00000586988 SOS2Q07890 1332 aaPredicted RBP16.02■□□□□ 0.16
DNMT1-211ENST00000586988 MORC1Q86VD1 984 aa16.02■□□□□ 0.16
DNMT1-211ENST00000586988 NME9Q86XW9 330 aa16.02■□□□□ 0.16
DNMT1-211ENST00000586988 COG3Q96JB2 828 aa16.02■□□□□ 0.16
DNMT1-211ENST00000586988 PHLPP1O60346 1717 aa16.02■□□□□ 0.15
DNMT1-211ENST00000586988 MED1Q15648 1581 aaPredicted RBP16.01■□□□□ 0.15
DNMT1-211ENST00000586988 XPCQ01831 940 aaPredicted RBP16.01■□□□□ 0.15
DNMT1-211ENST00000586988 PIAS4Q8N2W9 510 aaPredicted RBP16.01■□□□□ 0.15
DNMT1-211ENST00000586988 GGNBP2Q9H3C7 697 aa16.01■□□□□ 0.15
DNMT1-211ENST00000586988 MYBBP1AQ9BQG0 1328 aaKnown RBP16■□□□□ 0.15
DNMT1-211ENST00000586988 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
DNMT1-211ENST00000586988 MARF1Q9Y4F3 1742 aaKnown RBP16■□□□□ 0.15
DNMT1-211ENST00000586988 CNGB1Q14028 1251 aaPredicted RBP16■□□□□ 0.15
DNMT1-211ENST00000586988 ABTB2Q8N961 1025 aa16■□□□□ 0.15
DNMT1-211ENST00000586988 COL16A1Q07092 1604 aaPredicted RBP15.99■□□□□ 0.15
DNMT1-211ENST00000586988 PIP4K2BP78356 416 aa15.99■□□□□ 0.15
DNMT1-211ENST00000586988 DDX17Q92841 729 aaKnown RBP15.99■□□□□ 0.15
DNMT1-211ENST00000586988 SPATA31A3Q5VYP0 1347 aa15.98■□□□□ 0.15
DNMT1-211ENST00000586988 NLRP6P59044 892 aa15.98■□□□□ 0.15
DNMT1-211ENST00000586988 SLIT3O75094 1523 aa15.98■□□□□ 0.15
DNMT1-211ENST00000586988 NLRP13Q86W25 1043 aa15.97■□□□□ 0.15
DNMT1-211ENST00000586988 AATKQ6ZMQ8 1374 aa15.97■□□□□ 0.15
DNMT1-211ENST00000586988 PHRF1Q9P1Y6 1649 aaKnown RBP15.97■□□□□ 0.15
DNMT1-211ENST00000586988 LMOD2Q6P5Q4 547 aa15.96■□□□□ 0.15
DNMT1-211ENST00000586988 CRYBG1Q9Y4K1 1723 aa15.96■□□□□ 0.15
DNMT1-211ENST00000586988 USP19O94966 1318 aa15.95■□□□□ 0.14
DNMT1-211ENST00000586988 COL22A1Q8NFW1 1626 aaPredicted RBP15.95■□□□□ 0.14
DNMT1-211ENST00000586988 ABCA3Q99758 1704 aa15.94■□□□□ 0.14
DNMT1-211ENST00000586988 MIER1Q8N108 512 aa15.94■□□□□ 0.14
DNMT1-211ENST00000586988 KCNH5Q8NCM2 988 aa15.94■□□□□ 0.14
DNMT1-211ENST00000586988 LRRC59Q96AG4 307 aaKnown RBP15.94■□□□□ 0.14
DNMT1-211ENST00000586988 NFAT5O94916 1531 aa15.94■□□□□ 0.14
DNMT1-211ENST00000586988 SMG6Q86US8 1419 aaKnown RBP15.94■□□□□ 0.14
DNMT1-211ENST00000586988 CCER2I3L3R5 266 aa15.93■□□□□ 0.14
DNMT1-211ENST00000586988 PPP2R1AP30153 589 aa15.93■□□□□ 0.14
DNMT1-211ENST00000586988 ZRANB1Q9UGI0 708 aa15.93■□□□□ 0.14
DNMT1-211ENST00000586988 TNNT2P45379 298 aaPredicted RBP15.92■□□□□ 0.14
DNMT1-211ENST00000586988 NUTM2GQ5VZR2 741 aa15.92■□□□□ 0.14
DNMT1-211ENST00000586988 SHPRHQ149N8 1683 aa15.92■□□□□ 0.14
DNMT1-211ENST00000586988 CDK12Q9NYV4 1490 aaPredicted RBP15.91■□□□□ 0.14
DNMT1-211ENST00000586988 RTL1A6NKG5 1358 aa15.9■□□□□ 0.14
DNMT1-211ENST00000586988 KIF24Q5T7B8 1368 aa15.9■□□□□ 0.14
DNMT1-211ENST00000586988 MAP2P11137 1827 aaKnown RBP15.9■□□□□ 0.14
DNMT1-211ENST00000586988 LTN1O94822 1766 aa15.9■□□□□ 0.14
DNMT1-211ENST00000586988 ABCC6O95255 1503 aa15.89■□□□□ 0.13
DNMT1-211ENST00000586988 PNPLA6Q8IY17 1366 aa15.89■□□□□ 0.13
DNMT1-211ENST00000586988 CFAP53Q96M91 514 aa15.88■□□□□ 0.13
DNMT1-211ENST00000586988 SOX12O15370 315 aa15.87■□□□□ 0.13
DNMT1-211ENST00000586988 GCP02774 474 aa15.87■□□□□ 0.13
DNMT1-211ENST00000586988 HAP1P54257 671 aaPredicted RBP15.87■□□□□ 0.13
DNMT1-211ENST00000586988 MRS2Q9HD23 443 aa15.87■□□□□ 0.13
DNMT1-211ENST00000586988 FLT4P35916 1363 aa15.87■□□□□ 0.13
DNMT1-211ENST00000586988 JCADQ9P266 1359 aa15.87■□□□□ 0.13
DNMT1-211ENST00000586988 PPP4R3CPQ6ZMV5 832 aa15.86■□□□□ 0.13
DNMT1-211ENST00000586988 POLKQ9UBT6 870 aa15.86■□□□□ 0.13
DNMT1-211ENST00000586988 PEAK1Q9H792 1746 aa15.85■□□□□ 0.13
DNMT1-211ENST00000586988 MTHFSP49914 203 aa15.85■□□□□ 0.13
DNMT1-211ENST00000586988 RRS1Q15050 365 aaKnown RBP15.85■□□□□ 0.13
DNMT1-211ENST00000586988 MAP3K19Q56UN5 1328 aa15.85■□□□□ 0.13
DNMT1-211ENST00000586988 CPDO75976 1380 aa15.85■□□□□ 0.13
DNMT1-211ENST00000586988 EMILIN1Q9Y6C2 1016 aa15.84■□□□□ 0.13
DNMT1-211ENST00000586988 INSRP06213 1382 aa15.84■□□□□ 0.13
DNMT1-211ENST00000586988 COL3A1P02461 1466 aaPredicted RBP15.84■□□□□ 0.13
DNMT1-211ENST00000586988 PPM1GO15355 546 aaPredicted RBP15.83■□□□□ 0.12
DNMT1-211ENST00000586988 AMPHP49418 695 aa15.83■□□□□ 0.12
DNMT1-211ENST00000586988 BLMP54132 1417 aaPredicted RBP15.83■□□□□ 0.12
DNMT1-211ENST00000586988 PLEKHG5O94827 1062 aa15.82■□□□□ 0.12
DNMT1-211ENST00000586988 SPATA31A6Q5VVP1 1343 aa15.81■□□□□ 0.12
DNMT1-211ENST00000586988 ARHGEF25Q86VW2 580 aa15.81■□□□□ 0.12
DNMT1-211ENST00000586988 CABLES1Q8TDN4 633 aa15.81■□□□□ 0.12
DNMT1-211ENST00000586988 COL14A1Q05707 1796 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms