RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 AFF2P51816 1311 aa20.32■□□□□ 0.84
SMARCA4-212ENST00000586985 POTEAQ6S8J7 498 aa20.32■□□□□ 0.84
SMARCA4-212ENST00000586985 ITSN1Q15811 1721 aa20.31■□□□□ 0.84
SMARCA4-212ENST00000586985 EIF4G2P78344 907 aaKnown RBP eCLIP20.31■□□□□ 0.84
SMARCA4-212ENST00000586985 CDCA8Q53HL2 280 aa20.31■□□□□ 0.84
SMARCA4-212ENST00000586985 NUTM2GQ5VZR2 741 aa20.31■□□□□ 0.84
SMARCA4-212ENST00000586985 BRD4O60885 1362 aaPredicted RBP20.3■□□□□ 0.84
SMARCA4-212ENST00000586985 HDGFL2Q7Z4V5 671 aaPredicted RBP20.29■□□□□ 0.84
SMARCA4-212ENST00000586985 NLRP13Q86W25 1043 aa20.29■□□□□ 0.84
SMARCA4-212ENST00000586985 SLC12A5Q9H2X9 1139 aa20.29■□□□□ 0.84
SMARCA4-212ENST00000586985 USP21Q9UK80 565 aa20.29■□□□□ 0.84
SMARCA4-212ENST00000586985 COL22A1Q8NFW1 1626 aaPredicted RBP20.28■□□□□ 0.84
SMARCA4-212ENST00000586985 FNBP4Q8N3X1 1017 aaPredicted RBP20.28■□□□□ 0.84
SMARCA4-212ENST00000586985 QTRT2Q9H974 415 aaKnown RBP20.28■□□□□ 0.84
SMARCA4-212ENST00000586985 TERF2IPQ9NYB0 399 aa20.28■□□□□ 0.84
SMARCA4-212ENST00000586985 USP6P35125 1406 aa20.26■□□□□ 0.83
SMARCA4-212ENST00000586985 TOPAZ1Q8N9V7 1692 aa20.26■□□□□ 0.83
SMARCA4-212ENST00000586985 KTN1Q86UP2 1357 aaKnown RBP20.25■□□□□ 0.83
SMARCA4-212ENST00000586985 RXRBP28702 533 aa20.25■□□□□ 0.83
SMARCA4-212ENST00000586985 NLRP6P59044 892 aa20.25■□□□□ 0.83
SMARCA4-212ENST00000586985 TTC21BQ7Z4L5 1316 aa20.25■□□□□ 0.83
SMARCA4-212ENST00000586985 HSPA5P11021 654 aaKnown RBP20.24■□□□□ 0.83
SMARCA4-212ENST00000586985 TRPM3Q9HCF6 1732 aaPredicted RBP20.22■□□□□ 0.83
SMARCA4-212ENST00000586985 CPSF1Q10570 1443 aaKnown RBP20.22■□□□□ 0.83
SMARCA4-212ENST00000586985 FAM83GA6ND36 823 aa20.22■□□□□ 0.83
SMARCA4-212ENST00000586985 TRPC5Q9UL62 973 aaPredicted RBP20.22■□□□□ 0.83
SMARCA4-212ENST00000586985 TTC21AQ8NDW8 1320 aa20.22■□□□□ 0.83
SMARCA4-212ENST00000586985 UNC5CLQ8IV45 518 aa20.21■□□□□ 0.83
SMARCA4-212ENST00000586985 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.21■□□□□ 0.83
SMARCA4-212ENST00000586985 NINLQ9Y2I6 1382 aa20.21■□□□□ 0.83
SMARCA4-212ENST00000586985 ZC3H6P61129 1189 aaKnown RBP20.2■□□□□ 0.82
SMARCA4-212ENST00000586985 RBM6P78332 1123 aaKnown RBP20.2■□□□□ 0.82
SMARCA4-212ENST00000586985 POLR3GLQ9BT43 218 aa20.2■□□□□ 0.82
SMARCA4-212ENST00000586985 PRDM11Q9NQV5 511 aa20.2■□□□□ 0.82
SMARCA4-212ENST00000586985 GCP02774 474 aa20.19■□□□□ 0.82
SMARCA4-212ENST00000586985 SSH2Q76I76 1423 aa20.19■□□□□ 0.82
SMARCA4-212ENST00000586985 ALS2Q96Q42 1657 aa20.18■□□□□ 0.82
SMARCA4-212ENST00000586985 BTG4Q9NY30 223 aa20.16■□□□□ 0.82
SMARCA4-212ENST00000586985 USP19O94966 1318 aa20.16■□□□□ 0.82
SMARCA4-212ENST00000586985 SOCS7O14512 581 aa20.15■□□□□ 0.82
SMARCA4-212ENST00000586985 KCNH5Q8NCM2 988 aa20.15■□□□□ 0.82
SMARCA4-212ENST00000586985 CCDC9Q9Y3X0 531 aaKnown RBP20.15■□□□□ 0.82
SMARCA4-212ENST00000586985 A0A1W2PP64 1363 aa20.15■□□□□ 0.82
SMARCA4-212ENST00000586985 BCL9LQ86UU0 1499 aa20.15■□□□□ 0.82
SMARCA4-212ENST00000586985 CD163L1Q9NR16 1453 aa20.14■□□□□ 0.81
SMARCA4-212ENST00000586985 KIAA0232Q92628 1395 aa20.14■□□□□ 0.81
SMARCA4-212ENST00000586985 ZBTB7CA1YPR0 619 aa20.14■□□□□ 0.81
SMARCA4-212ENST00000586985 CHRNA2Q15822 529 aa20.14■□□□□ 0.81
SMARCA4-212ENST00000586985 GJD4Q96KN9 370 aaPredicted RBP20.14■□□□□ 0.81
SMARCA4-212ENST00000586985 SLIT2O94813 1529 aa20.13■□□□□ 0.81
SMARCA4-212ENST00000586985 NME9Q86XW9 330 aa20.13■□□□□ 0.81
SMARCA4-212ENST00000586985 EDC4Q6P2E9 1401 aaKnown RBP20.12■□□□□ 0.81
SMARCA4-212ENST00000586985 EVA1CP58658 441 aa20.12■□□□□ 0.81
SMARCA4-212ENST00000586985 VPS72Q15906 364 aa20.12■□□□□ 0.81
SMARCA4-212ENST00000586985 ANKRD36BQ8N2N9 1353 aa20.11■□□□□ 0.81
SMARCA4-212ENST00000586985 SOX12O15370 315 aa20.11■□□□□ 0.81
SMARCA4-212ENST00000586985 ZRANB1Q9UGI0 708 aa20.11■□□□□ 0.81
SMARCA4-212ENST00000586985 ATRNO75882 1429 aa20.1■□□□□ 0.81
SMARCA4-212ENST00000586985 CPDO75976 1380 aa20.08■□□□□ 0.81
SMARCA4-212ENST00000586985 USP31Q70CQ4 1352 aa20.08■□□□□ 0.81
SMARCA4-212ENST00000586985 STRN4Q9NRL3 753 aa20.08■□□□□ 0.81
SMARCA4-212ENST00000586985 COG3Q96JB2 828 aa20.07■□□□□ 0.8
SMARCA4-212ENST00000586985 AKAP12Q02952 1782 aa20.07■□□□□ 0.8
SMARCA4-212ENST00000586985 MARF1Q9Y4F3 1742 aaKnown RBP20.07■□□□□ 0.8
SMARCA4-212ENST00000586985 ABCA3Q99758 1704 aa20.05■□□□□ 0.8
SMARCA4-212ENST00000586985 C11orf95C9JLR9 678 aaPredicted RBP20.05■□□□□ 0.8
SMARCA4-212ENST00000586985 ARHGEF25Q86VW2 580 aa20.05■□□□□ 0.8
SMARCA4-212ENST00000586985 FYB1O15117 783 aa20.04■□□□□ 0.8
SMARCA4-212ENST00000586985 CARD14Q9BXL6 1004 aa20.04■□□□□ 0.8
SMARCA4-212ENST00000586985 CDK12Q9NYV4 1490 aaPredicted RBP20.04■□□□□ 0.8
SMARCA4-212ENST00000586985 COL14A1Q05707 1796 aaKnown RBP20.03■□□□□ 0.8
SMARCA4-212ENST00000586985 AATKQ6ZMQ8 1374 aa20.03■□□□□ 0.8
SMARCA4-212ENST00000586985 SLIT3O75094 1523 aa20.02■□□□□ 0.8
SMARCA4-212ENST00000586985 MON2Q7Z3U7 1717 aa20.02■□□□□ 0.8
SMARCA4-212ENST00000586985 GGNBP2Q9H3C7 697 aa20.02■□□□□ 0.8
SMARCA4-212ENST00000586985 PANK3Q9H999 370 aa20.02■□□□□ 0.8
SMARCA4-212ENST00000586985 PIK3C2AO00443 1686 aa20.02■□□□□ 0.8
SMARCA4-212ENST00000586985 CRYBG1Q9Y4K1 1723 aa20.02■□□□□ 0.79
SMARCA4-212ENST00000586985 PHRF1Q9P1Y6 1649 aaKnown RBP20.02■□□□□ 0.79
SMARCA4-212ENST00000586985 SPATA31A5Q5VU36 1347 aa20.01■□□□□ 0.79
SMARCA4-212ENST00000586985 SPATA31A7Q8IWB4 1347 aa20.01■□□□□ 0.79
SMARCA4-212ENST00000586985 NRKQ7Z2Y5 1582 aa20■□□□□ 0.79
SMARCA4-212ENST00000586985 A0A0G2JS52 829 aa20■□□□□ 0.79
SMARCA4-212ENST00000586985 MYT1Q01538 1121 aa20■□□□□ 0.79
SMARCA4-212ENST00000586985 ONECUT3O60422 494 aaPredicted RBP19.99■□□□□ 0.79
SMARCA4-212ENST00000586985 FAM98CQ17RN3 349 aaKnown RBP19.99■□□□□ 0.79
SMARCA4-212ENST00000586985 LARP1Q6PKG0 1096 aaKnown RBP19.99■□□□□ 0.79
SMARCA4-212ENST00000586985 SEPT12Q8IYM1 358 aa19.99■□□□□ 0.79
SMARCA4-212ENST00000586985 USP35Q9P2H5 1018 aa19.99■□□□□ 0.79
SMARCA4-212ENST00000586985 AXIN2Q9Y2T1 843 aa19.99■□□□□ 0.79
SMARCA4-212ENST00000586985 RGS12O14924 1447 aa19.98■□□□□ 0.79
SMARCA4-212ENST00000586985 NWD2Q9ULI1 1742 aa19.98■□□□□ 0.79
SMARCA4-212ENST00000586985 CGNL1Q0VF96 1302 aa19.98■□□□□ 0.79
SMARCA4-212ENST00000586985 KIF7Q2M1P5 1343 aa19.98■□□□□ 0.79
SMARCA4-212ENST00000586985 PLCH1Q4KWH8 1693 aa19.97■□□□□ 0.79
SMARCA4-212ENST00000586985 NSD3Q9BZ95 1437 aa19.97■□□□□ 0.79
SMARCA4-212ENST00000586985 CSB-PGBD3P0DP91 1061 aa19.97■□□□□ 0.79
SMARCA4-212ENST00000586985 TOM1L2Q6ZVM7 507 aa19.97■□□□□ 0.79
SMARCA4-212ENST00000586985 SPATA31A1Q5TZJ5 1347 aa19.97■□□□□ 0.79
SMARCA4-212ENST00000586985 CAMTA1Q9Y6Y1 1673 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms