RNA–Protein interactions for RNA: ENST00000586709.1

LAMA3-205, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 637 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-205ENST00000586709 AFF2P51816 1311 aa14.33□□□□□ -0.12
LAMA3-205ENST00000586709 SPATA31A3Q5VYP0 1347 aa14.33□□□□□ -0.12
LAMA3-205ENST00000586709 PRR36Q9H6K5 1346 aa14.33□□□□□ -0.12
LAMA3-205ENST00000586709 TNS3Q68CZ2 1445 aa14.32□□□□□ -0.12
LAMA3-205ENST00000586709 C8orf37Q96NL8 207 aa14.32□□□□□ -0.12
LAMA3-205ENST00000586709 ADAMTS2O95450 1211 aa14.31□□□□□ -0.12
LAMA3-205ENST00000586709 PSME1Q06323 249 aa14.31□□□□□ -0.12
LAMA3-205ENST00000586709 PMFBP1Q8TBY8 1022 aa14.31□□□□□ -0.12
LAMA3-205ENST00000586709 SBNO1A3KN83 1393 aa14.31□□□□□ -0.12
LAMA3-205ENST00000586709 CENPJQ9HC77 1338 aaPredicted RBP14.3□□□□□ -0.12
LAMA3-205ENST00000586709 ROCK2O75116 1388 aaKnown RBP14.3□□□□□ -0.12
LAMA3-205ENST00000586709 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.29□□□□□ -0.12
LAMA3-205ENST00000586709 TONSLQ96HA7 1378 aa14.29□□□□□ -0.12
LAMA3-205ENST00000586709 CRYBG1Q9Y4K1 1723 aa14.29□□□□□ -0.12
LAMA3-205ENST00000586709 ARHGEF10O15013 1369 aa14.28□□□□□ -0.12
LAMA3-205ENST00000586709 GPRASP1Q5JY77 1395 aa14.28□□□□□ -0.12
LAMA3-205ENST00000586709 NUDT16Q96DE0 195 aaKnown RBP14.28□□□□□ -0.12
LAMA3-205ENST00000586709 NGLY1Q96IV0 654 aa14.28□□□□□ -0.12
LAMA3-205ENST00000586709 CDK19Q9BWU1 502 aa14.28□□□□□ -0.12
LAMA3-205ENST00000586709 PLCH1Q4KWH8 1693 aa14.27□□□□□ -0.12
LAMA3-205ENST00000586709 SPDYE2BA6NHP3 402 aa14.27□□□□□ -0.13
LAMA3-205ENST00000586709 SPDYE6P0CI01 402 aa14.27□□□□□ -0.13
LAMA3-205ENST00000586709 SPDYE2Q495Y8 402 aa14.27□□□□□ -0.13
LAMA3-205ENST00000586709 NWD2Q9ULI1 1742 aa14.27□□□□□ -0.13
LAMA3-205ENST00000586709 RALGAPBQ86X10 1494 aa14.26□□□□□ -0.13
LAMA3-205ENST00000586709 NBPF8Q3BBV2 869 aa14.26□□□□□ -0.13
LAMA3-205ENST00000586709 NGDNQ8NEJ9 315 aaKnown RBP14.26□□□□□ -0.13
LAMA3-205ENST00000586709 CDK12Q9NYV4 1490 aaPredicted RBP14.25□□□□□ -0.13
LAMA3-205ENST00000586709 RXRBP28702 533 aa14.25□□□□□ -0.13
LAMA3-205ENST00000586709 EP400Q96L91 3159 aa14.24□□□□□ -0.13
LAMA3-205ENST00000586709 PHRF1Q9P1Y6 1649 aaKnown RBP14.24□□□□□ -0.13
LAMA3-205ENST00000586709 PRKAR2AP13861 404 aaKnown RBP14.24□□□□□ -0.13
LAMA3-205ENST00000586709 LMOD2Q6P5Q4 547 aa14.24□□□□□ -0.13
LAMA3-205ENST00000586709 FNBP4Q8N3X1 1017 aaPredicted RBP14.24□□□□□ -0.13
LAMA3-205ENST00000586709 QTRT2Q9H974 415 aaKnown RBP14.24□□□□□ -0.13
LAMA3-205ENST00000586709 POLR3AO14802 1390 aaPredicted RBP14.23□□□□□ -0.13
LAMA3-205ENST00000586709 SRPK2P78362 688 aaKnown RBP14.23□□□□□ -0.13
LAMA3-205ENST00000586709 USP21Q9UK80 565 aa14.23□□□□□ -0.13
LAMA3-205ENST00000586709 CCDC61Q9Y6R9 512 aa14.23□□□□□ -0.13
LAMA3-205ENST00000586709 AKAP12Q02952 1782 aa14.22□□□□□ -0.13
LAMA3-205ENST00000586709 HAP1P54257 671 aaPredicted RBP14.22□□□□□ -0.13
LAMA3-205ENST00000586709 BCL9LQ86UU0 1499 aa14.22□□□□□ -0.13
LAMA3-205ENST00000586709 ATRNO75882 1429 aa14.22□□□□□ -0.13
LAMA3-205ENST00000586709 PPIP5K1Q6PFW1 1433 aa14.22□□□□□ -0.13
LAMA3-205ENST00000586709 SLIT2O94813 1529 aa14.21□□□□□ -0.13
LAMA3-205ENST00000586709 ACEP12821 1306 aa14.21□□□□□ -0.13
LAMA3-205ENST00000586709 PLEKHG3A1L390 1219 aa14.21□□□□□ -0.13
LAMA3-205ENST00000586709 RBM6P78332 1123 aaKnown RBP14.21□□□□□ -0.13
LAMA3-205ENST00000586709 CABLES1Q8TDN4 633 aa14.21□□□□□ -0.13
LAMA3-205ENST00000586709 TRPC5Q9UL62 973 aaPredicted RBP14.21□□□□□ -0.13
LAMA3-205ENST00000586709 COL14A1Q05707 1796 aaKnown RBP14.21□□□□□ -0.13
LAMA3-205ENST00000586709 NRAPQ86VF7 1730 aa14.21□□□□□ -0.14
LAMA3-205ENST00000586709 EVC2Q86UK5 1308 aa14.2□□□□□ -0.14
LAMA3-205ENST00000586709 PAK3O75914 559 aaPredicted RBP14.2□□□□□ -0.14
LAMA3-205ENST00000586709 PLEKHG5O94827 1062 aa14.2□□□□□ -0.14
LAMA3-205ENST00000586709 CARD11Q9BXL7 1154 aa14.2□□□□□ -0.14
LAMA3-205ENST00000586709 CABP2Q9NPB3 220 aa14.2□□□□□ -0.14
LAMA3-205ENST00000586709 RGS12O14924 1447 aa14.2□□□□□ -0.14
LAMA3-205ENST00000586709 C19orf67A6NJJ6 358 aa14.19□□□□□ -0.14
LAMA3-205ENST00000586709 SBNO2Q9Y2G9 1366 aa14.19□□□□□ -0.14
LAMA3-205ENST00000586709 LHX8Q68G74 356 aa14.18□□□□□ -0.14
LAMA3-205ENST00000586709 SPDYE1Q8NFV5 336 aaPredicted RBP14.18□□□□□ -0.14
LAMA3-205ENST00000586709 PCGF6Q9BYE7 350 aa14.18□□□□□ -0.14
LAMA3-205ENST00000586709 GLI3P10071 1580 aa14.17□□□□□ -0.14
LAMA3-205ENST00000586709 CLSPNQ9HAW4 1339 aa14.16□□□□□ -0.14
LAMA3-205ENST00000586709 MON2Q7Z3U7 1717 aa14.16□□□□□ -0.14
LAMA3-205ENST00000586709 BRWD3Q6RI45 1802 aa14.16□□□□□ -0.14
LAMA3-205ENST00000586709 UNC5CLQ8IV45 518 aa14.16□□□□□ -0.14
LAMA3-205ENST00000586709 NRKQ7Z2Y5 1582 aa14.16□□□□□ -0.14
LAMA3-205ENST00000586709 PIK3C2AO00443 1686 aa14.15□□□□□ -0.14
LAMA3-205ENST00000586709 BRD4O60885 1362 aaPredicted RBP14.15□□□□□ -0.14
LAMA3-205ENST00000586709 USP6P35125 1406 aa14.15□□□□□ -0.14
LAMA3-205ENST00000586709 ATAD2Q6PL18 1390 aa14.14□□□□□ -0.15
LAMA3-205ENST00000586709 CABP1Q9NZU7 370 aa14.14□□□□□ -0.15
LAMA3-205ENST00000586709 FAM83GA6ND36 823 aa14.13□□□□□ -0.15
LAMA3-205ENST00000586709 GABBR2O75899 941 aa14.13□□□□□ -0.15
LAMA3-205ENST00000586709 GJD4Q96KN9 370 aaPredicted RBP14.13□□□□□ -0.15
LAMA3-205ENST00000586709 CLEC11AQ9Y240 323 aa14.13□□□□□ -0.15
LAMA3-205ENST00000586709 NUTM2GQ5VZR2 741 aa14.12□□□□□ -0.15
LAMA3-205ENST00000586709 ABTB2Q8N961 1025 aa14.12□□□□□ -0.15
LAMA3-205ENST00000586709 SSH2Q76I76 1423 aa14.1□□□□□ -0.15
LAMA3-205ENST00000586709 VPS72Q15906 364 aa14.1□□□□□ -0.15
LAMA3-205ENST00000586709 TIMELESSQ9UNS1 1208 aa14.1□□□□□ -0.15
LAMA3-205ENST00000586709 LMO7Q8WWI1 1683 aa14.1□□□□□ -0.15
LAMA3-205ENST00000586709 USP19O94966 1318 aa14.1□□□□□ -0.15
LAMA3-205ENST00000586709 KIAA0232Q92628 1395 aa14.09□□□□□ -0.15
LAMA3-205ENST00000586709 ATXN8OSP0DMR3 200 aa14.09□□□□□ -0.15
LAMA3-205ENST00000586709 UPF1Q92900 1129 aaKnown RBP eCLIP14.09□□□□□ -0.15
LAMA3-205ENST00000586709 PRDM11Q9NQV5 511 aa14.09□□□□□ -0.15
LAMA3-205ENST00000586709 BTG4Q9NY30 223 aa14.09□□□□□ -0.15
LAMA3-205ENST00000586709 USP54Q70EL1 1684 aa14.09□□□□□ -0.15
LAMA3-205ENST00000586709 SLIT3O75094 1523 aa14.09□□□□□ -0.15
LAMA3-205ENST00000586709 CPSF1Q10570 1443 aaKnown RBP14.08□□□□□ -0.15
LAMA3-205ENST00000586709 NLRP13Q86W25 1043 aa14.08□□□□□ -0.16
LAMA3-205ENST00000586709 ZNF692Q9BU19 519 aaPredicted RBP14.08□□□□□ -0.16
LAMA3-205ENST00000586709 ST20-MTHFSA0A0A6YYL1 179 aa14.07□□□□□ -0.16
LAMA3-205ENST00000586709 ZC3H6P61129 1189 aaKnown RBP14.07□□□□□ -0.16
LAMA3-205ENST00000586709 CCDC9Q9Y3X0 531 aaKnown RBP14.07□□□□□ -0.16
LAMA3-205ENST00000586709 CPDO75976 1380 aa14.07□□□□□ -0.16
LAMA3-205ENST00000586709 KTN1Q86UP2 1357 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms