RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 SRPK2P78362 688 aaKnown RBP13.85□□□□□ -0.19
APOC1-201ENST00000586638 ESCO1Q5FWF5 840 aa13.85□□□□□ -0.19
APOC1-201ENST00000586638 TMC1Q8TDI8 760 aa13.85□□□□□ -0.19
APOC1-201ENST00000586638 ITSN1Q15811 1721 aa13.84□□□□□ -0.19
APOC1-201ENST00000586638 RALBP1Q15311 655 aa13.84□□□□□ -0.19
APOC1-201ENST00000586638 KNSTRNQ9Y448 316 aa13.84□□□□□ -0.19
APOC1-201ENST00000586638 KIF20BQ96Q89 1820 aa13.84□□□□□ -0.19
APOC1-201ENST00000586638 ANKRD26Q9UPS8 1709 aa13.84□□□□□ -0.19
APOC1-201ENST00000586638 ANKRD36BQ8N2N9 1353 aa13.83□□□□□ -0.19
APOC1-201ENST00000586638 AMER1Q5JTC6 1135 aaPredicted RBP13.83□□□□□ -0.2
APOC1-201ENST00000586638 PUS7Q96PZ0 661 aaKnown RBP13.83□□□□□ -0.2
APOC1-201ENST00000586638 SLC12A5Q9H2X9 1139 aa13.83□□□□□ -0.2
APOC1-201ENST00000586638 ZRANB1Q9UGI0 708 aa13.83□□□□□ -0.2
APOC1-201ENST00000586638 NINLQ9Y2I6 1382 aa13.83□□□□□ -0.2
APOC1-201ENST00000586638 CD163L1Q9NR16 1453 aa13.82□□□□□ -0.2
APOC1-201ENST00000586638 NALCNQ8IZF0 1738 aa13.82□□□□□ -0.2
APOC1-201ENST00000586638 AKAP12Q02952 1782 aa13.82□□□□□ -0.2
APOC1-201ENST00000586638 CCDC125Q86Z20 511 aa13.82□□□□□ -0.2
APOC1-201ENST00000586638 CDK19Q9BWU1 502 aa13.82□□□□□ -0.2
APOC1-201ENST00000586638 CARD14Q9BXL6 1004 aa13.82□□□□□ -0.2
APOC1-201ENST00000586638 A0A1W2PP64 1363 aa13.82□□□□□ -0.2
APOC1-201ENST00000586638 BRD4O60885 1362 aaPredicted RBP13.82□□□□□ -0.2
APOC1-201ENST00000586638 NPC1L1Q9UHC9 1359 aa13.82□□□□□ -0.2
APOC1-201ENST00000586638 ATP7BP35670 1465 aa13.81□□□□□ -0.2
APOC1-201ENST00000586638 FOXO3O43524 673 aa13.81□□□□□ -0.2
APOC1-201ENST00000586638 NPHP3Q7Z494 1330 aa13.81□□□□□ -0.2
APOC1-201ENST00000586638 CDC42BPGQ6DT37 1551 aa13.8□□□□□ -0.2
APOC1-201ENST00000586638 SIRT1Q96EB6 747 aa13.8□□□□□ -0.2
APOC1-201ENST00000586638 MON2Q7Z3U7 1717 aa13.8□□□□□ -0.2
APOC1-201ENST00000586638 NUTM2FA1L443 756 aa13.79□□□□□ -0.2
APOC1-201ENST00000586638 XPCQ01831 940 aaPredicted RBP13.79□□□□□ -0.2
APOC1-201ENST00000586638 FAM9BQ8IZU0 186 aa13.79□□□□□ -0.2
APOC1-201ENST00000586638 GJD4Q96KN9 370 aaPredicted RBP13.79□□□□□ -0.2
APOC1-201ENST00000586638 FMN2Q9NZ56 1722 aa13.78□□□□□ -0.2
APOC1-201ENST00000586638 WASLO00401 505 aaPredicted RBP13.78□□□□□ -0.2
APOC1-201ENST00000586638 ATRNO75882 1429 aa13.78□□□□□ -0.2
APOC1-201ENST00000586638 RGPD8O14715 1765 aaPredicted RBP13.78□□□□□ -0.2
APOC1-201ENST00000586638 PPIP5K1Q6PFW1 1433 aa13.77□□□□□ -0.21
APOC1-201ENST00000586638 NLRP13Q86W25 1043 aa13.77□□□□□ -0.21
APOC1-201ENST00000586638 NRKQ7Z2Y5 1582 aa13.76□□□□□ -0.21
APOC1-201ENST00000586638 BCL9LQ86UU0 1499 aa13.75□□□□□ -0.21
APOC1-201ENST00000586638 PRR36Q9H6K5 1346 aa13.75□□□□□ -0.21
APOC1-201ENST00000586638 PPP2R1AP30153 589 aa13.74□□□□□ -0.21
APOC1-201ENST00000586638 UNC5CLQ8IV45 518 aa13.74□□□□□ -0.21
APOC1-201ENST00000586638 NSD2O96028 1365 aa13.73□□□□□ -0.21
APOC1-201ENST00000586638 CGNL1Q0VF96 1302 aa13.73□□□□□ -0.21
APOC1-201ENST00000586638 HNRNPUQ00839 825 aaKnown RBP eCLIP13.73□□□□□ -0.21
APOC1-201ENST00000586638 KRT28Q7Z3Y7 464 aa13.73□□□□□ -0.21
APOC1-201ENST00000586638 CABP1Q9NZU7 370 aa13.73□□□□□ -0.21
APOC1-201ENST00000586638 HDGFL2Q7Z4V5 671 aaPredicted RBP13.72□□□□□ -0.21
APOC1-201ENST00000586638 NUDT16Q96DE0 195 aaKnown RBP13.72□□□□□ -0.21
APOC1-201ENST00000586638 TERF2IPQ9NYB0 399 aa13.72□□□□□ -0.21
APOC1-201ENST00000586638 SPATA31A3Q5VYP0 1347 aa13.71□□□□□ -0.21
APOC1-201ENST00000586638 HAP1P54257 671 aaPredicted RBP13.71□□□□□ -0.21
APOC1-201ENST00000586638 PNISRQ8TF01 805 aaKnown RBP13.71□□□□□ -0.21
APOC1-201ENST00000586638 CPSF1Q10570 1443 aaKnown RBP13.71□□□□□ -0.22
APOC1-201ENST00000586638 PXDNQ92626 1479 aa13.7□□□□□ -0.22
APOC1-201ENST00000586638 PSME1Q06323 249 aa13.7□□□□□ -0.22
APOC1-201ENST00000586638 EDC4Q6P2E9 1401 aaKnown RBP13.7□□□□□ -0.22
APOC1-201ENST00000586638 COL22A1Q8NFW1 1626 aaPredicted RBP13.69□□□□□ -0.22
APOC1-201ENST00000586638 SF3B2Q13435 895 aaKnown RBP13.69□□□□□ -0.22
APOC1-201ENST00000586638 MORC1Q86VD1 984 aa13.69□□□□□ -0.22
APOC1-201ENST00000586638 ANKARQ7Z5J8 1434 aa13.68□□□□□ -0.22
APOC1-201ENST00000586638 PLEKHG5O94827 1062 aa13.68□□□□□ -0.22
APOC1-201ENST00000586638 SEPT12Q8IYM1 358 aa13.68□□□□□ -0.22
APOC1-201ENST00000586638 PHF8Q9UPP1 1060 aa13.68□□□□□ -0.22
APOC1-201ENST00000586638 CCDC9Q9Y3X0 531 aaKnown RBP13.68□□□□□ -0.22
APOC1-201ENST00000586638 BLMP54132 1417 aaPredicted RBP13.67□□□□□ -0.22
APOC1-201ENST00000586638 TNNT2P45379 298 aaPredicted RBP13.67□□□□□ -0.22
APOC1-201ENST00000586638 VPS72Q15906 364 aa13.67□□□□□ -0.22
APOC1-201ENST00000586638 LMOD2Q6P5Q4 547 aa13.67□□□□□ -0.22
APOC1-201ENST00000586638 CABLES1Q8TDN4 633 aa13.67□□□□□ -0.22
APOC1-201ENST00000586638 DEFB132Q7Z7B7 95 aa13.66□□□□□ -0.22
APOC1-201ENST00000586638 GGNBP2Q9H3C7 697 aa13.66□□□□□ -0.22
APOC1-201ENST00000586638 CCDC61Q9Y6R9 512 aa13.66□□□□□ -0.22
APOC1-201ENST00000586638 SLIT2O94813 1529 aa13.65□□□□□ -0.22
APOC1-201ENST00000586638 SENP3-EIF4A1A0A087X0R7 540 aa13.65□□□□□ -0.22
APOC1-201ENST00000586638 ONECUT3O60422 494 aaPredicted RBP13.65□□□□□ -0.22
APOC1-201ENST00000586638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.65□□□□□ -0.22
APOC1-201ENST00000586638 USP6P35125 1406 aa13.64□□□□□ -0.23
APOC1-201ENST00000586638 KRT27Q7Z3Y8 459 aa13.64□□□□□ -0.23
APOC1-201ENST00000586638 ZBED9Q6R2W3 1325 aa13.64□□□□□ -0.23
APOC1-201ENST00000586638 MAP2P11137 1827 aaKnown RBP13.63□□□□□ -0.23
APOC1-201ENST00000586638 FAM83GA6ND36 823 aa13.63□□□□□ -0.23
APOC1-201ENST00000586638 FYB1O15117 783 aa13.63□□□□□ -0.23
APOC1-201ENST00000586638 ACEP12821 1306 aa13.63□□□□□ -0.23
APOC1-201ENST00000586638 PIK3C2AO00443 1686 aa13.63□□□□□ -0.23
APOC1-201ENST00000586638 COL3A1P02461 1466 aaPredicted RBP13.62□□□□□ -0.23
APOC1-201ENST00000586638 POLR3AO14802 1390 aaPredicted RBP13.62□□□□□ -0.23
APOC1-201ENST00000586638 NME9Q86XW9 330 aa13.62□□□□□ -0.23
APOC1-201ENST00000586638 MARF1Q9Y4F3 1742 aaKnown RBP13.61□□□□□ -0.23
APOC1-201ENST00000586638 INSRP06213 1382 aa13.61□□□□□ -0.23
APOC1-201ENST00000586638 PLEKHG3A1L390 1219 aa13.61□□□□□ -0.23
APOC1-201ENST00000586638 WDR43Q15061 677 aaKnown RBP eCLIP13.61□□□□□ -0.23
APOC1-201ENST00000586638 PMFBP1Q8TBY8 1022 aa13.61□□□□□ -0.23
APOC1-201ENST00000586638 EP400Q96L91 3159 aa13.61□□□□□ -0.23
APOC1-201ENST00000586638 SBNO1A3KN83 1393 aa13.6□□□□□ -0.23
APOC1-201ENST00000586638 USP54Q70EL1 1684 aa13.6□□□□□ -0.23
APOC1-201ENST00000586638 A0A0G2JS52 829 aa13.6□□□□□ -0.23
APOC1-201ENST00000586638 GLI3P10071 1580 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms