RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 CCDC9Q9Y3X0 531 aaKnown RBP16.11■□□□□ 0.17
ACTN4-209ENST00000586538 QRICH2Q9H0J4 1663 aa16.11■□□□□ 0.17
ACTN4-209ENST00000586538 BRD4O60885 1362 aaPredicted RBP16.11■□□□□ 0.17
ACTN4-209ENST00000586538 TRPM1Q7Z4N2 1603 aa16.1■□□□□ 0.17
ACTN4-209ENST00000586538 ROCK2O75116 1388 aaKnown RBP16.1■□□□□ 0.17
ACTN4-209ENST00000586538 PLEKHG3A1L390 1219 aa16.09■□□□□ 0.17
ACTN4-209ENST00000586538 PLEKHG5O94827 1062 aa16.09■□□□□ 0.17
ACTN4-209ENST00000586538 GLI3P10071 1580 aa16.09■□□□□ 0.17
ACTN4-209ENST00000586538 NEUROD1Q13562 356 aa16.08■□□□□ 0.16
ACTN4-209ENST00000586538 ACEP12821 1306 aa16.08■□□□□ 0.16
ACTN4-209ENST00000586538 PRDM11Q9NQV5 511 aa16.07■□□□□ 0.16
ACTN4-209ENST00000586538 EVC2Q86UK5 1308 aa16.07■□□□□ 0.16
ACTN4-209ENST00000586538 PPIP5K1Q6PFW1 1433 aa16.07■□□□□ 0.16
ACTN4-209ENST00000586538 CRYBG1Q9Y4K1 1723 aa16.07■□□□□ 0.16
ACTN4-209ENST00000586538 FAM83GA6ND36 823 aa16.06■□□□□ 0.16
ACTN4-209ENST00000586538 NBPF8Q3BBV2 869 aa16.06■□□□□ 0.16
ACTN4-209ENST00000586538 SIN3AQ96ST3 1273 aa16.06■□□□□ 0.16
ACTN4-209ENST00000586538 BTG4Q9NY30 223 aa16.06■□□□□ 0.16
ACTN4-209ENST00000586538 NRAPQ86VF7 1730 aa16.05■□□□□ 0.16
ACTN4-209ENST00000586538 PHRF1Q9P1Y6 1649 aaKnown RBP16.05■□□□□ 0.16
ACTN4-209ENST00000586538 TONSLQ96HA7 1378 aa16.04■□□□□ 0.16
ACTN4-209ENST00000586538 A0A0G2JS52 829 aa16.04■□□□□ 0.16
ACTN4-209ENST00000586538 MYT1Q01538 1121 aa16.04■□□□□ 0.16
ACTN4-209ENST00000586538 SF3B2Q13435 895 aaKnown RBP16.04■□□□□ 0.16
ACTN4-209ENST00000586538 ONECUT3O60422 494 aaPredicted RBP16.03■□□□□ 0.16
ACTN4-209ENST00000586538 NLRP13Q86W25 1043 aa16.03■□□□□ 0.16
ACTN4-209ENST00000586538 SEPT12Q8IYM1 358 aa16.03■□□□□ 0.16
ACTN4-209ENST00000586538 ABTB2Q8N961 1025 aa16.03■□□□□ 0.16
ACTN4-209ENST00000586538 BLMP54132 1417 aaPredicted RBP16.02■□□□□ 0.16
ACTN4-209ENST00000586538 TRIM26Q12899 539 aaPredicted RBP16.02■□□□□ 0.16
ACTN4-209ENST00000586538 CABP2Q9NPB3 220 aa16.02■□□□□ 0.16
ACTN4-209ENST00000586538 KRT27Q7Z3Y8 459 aa16.01■□□□□ 0.15
ACTN4-209ENST00000586538 KIAA0232Q92628 1395 aa16■□□□□ 0.15
ACTN4-209ENST00000586538 SBNO2Q9Y2G9 1366 aa16■□□□□ 0.15
ACTN4-209ENST00000586538 ZNF692Q9BU19 519 aaPredicted RBP15.99■□□□□ 0.15
ACTN4-209ENST00000586538 USP6P35125 1406 aa15.99■□□□□ 0.15
ACTN4-209ENST00000586538 NRKQ7Z2Y5 1582 aa15.99■□□□□ 0.15
ACTN4-209ENST00000586538 CPDO75976 1380 aa15.99■□□□□ 0.15
ACTN4-209ENST00000586538 BRWD3Q6RI45 1802 aa15.98■□□□□ 0.15
ACTN4-209ENST00000586538 USP19O94966 1318 aa15.98■□□□□ 0.15
ACTN4-209ENST00000586538 SPATA31A5Q5VU36 1347 aa15.98■□□□□ 0.15
ACTN4-209ENST00000586538 SPATA31A7Q8IWB4 1347 aa15.98■□□□□ 0.15
ACTN4-209ENST00000586538 CARD11Q9BXL7 1154 aa15.98■□□□□ 0.15
ACTN4-209ENST00000586538 EP400Q96L91 3159 aa15.98■□□□□ 0.15
ACTN4-209ENST00000586538 SLC24A1O60721 1099 aa15.97■□□□□ 0.15
ACTN4-209ENST00000586538 FAM98CQ17RN3 349 aaKnown RBP15.97■□□□□ 0.15
ACTN4-209ENST00000586538 NUTM2GQ5VZR2 741 aa15.97■□□□□ 0.15
ACTN4-209ENST00000586538 CABP1Q9NZU7 370 aa15.97■□□□□ 0.15
ACTN4-209ENST00000586538 ZRANB1Q9UGI0 708 aa15.97■□□□□ 0.15
ACTN4-209ENST00000586538 EVA1CP58658 441 aa15.96■□□□□ 0.15
ACTN4-209ENST00000586538 ZC3H6P61129 1189 aaKnown RBP15.96■□□□□ 0.15
ACTN4-209ENST00000586538 SPATA31A1Q5TZJ5 1347 aa15.94■□□□□ 0.14
ACTN4-209ENST00000586538 GCP02774 474 aa15.94■□□□□ 0.14
ACTN4-209ENST00000586538 STRN4Q9NRL3 753 aa15.94■□□□□ 0.14
ACTN4-209ENST00000586538 THSD7AQ9UPZ6 1657 aa15.94■□□□□ 0.14
ACTN4-209ENST00000586538 SSH2Q76I76 1423 aa15.94■□□□□ 0.14
ACTN4-209ENST00000586538 TTC21AQ8NDW8 1320 aa15.94■□□□□ 0.14
ACTN4-209ENST00000586538 NLRP6P59044 892 aa15.93■□□□□ 0.14
ACTN4-209ENST00000586538 CHRNA2Q15822 529 aa15.93■□□□□ 0.14
ACTN4-209ENST00000586538 KCNH5Q8NCM2 988 aa15.93■□□□□ 0.14
ACTN4-209ENST00000586538 BAG6P46379 1132 aa15.92■□□□□ 0.14
ACTN4-209ENST00000586538 THRAP3Q9Y2W1 955 aaKnown RBP15.92■□□□□ 0.14
ACTN4-209ENST00000586538 SLIT3O75094 1523 aa15.92■□□□□ 0.14
ACTN4-209ENST00000586538 AKAP12Q02952 1782 aa15.92■□□□□ 0.14
ACTN4-209ENST00000586538 LMO7Q8WWI1 1683 aa15.92■□□□□ 0.14
ACTN4-209ENST00000586538 C11orf95C9JLR9 678 aaPredicted RBP15.91■□□□□ 0.14
ACTN4-209ENST00000586538 BARGINQ6ZT62 677 aa15.91■□□□□ 0.14
ACTN4-209ENST00000586538 RGPD1P0DJD0 1748 aa15.91■□□□□ 0.14
ACTN4-209ENST00000586538 PUS7Q96PZ0 661 aaKnown RBP15.9■□□□□ 0.14
ACTN4-209ENST00000586538 PIK3C2AO00443 1686 aa15.89■□□□□ 0.13
ACTN4-209ENST00000586538 KTN1Q86UP2 1357 aaKnown RBP15.89■□□□□ 0.13
ACTN4-209ENST00000586538 TCP11L2Q8N4U5 519 aa15.89■□□□□ 0.13
ACTN4-209ENST00000586538 TTC21BQ7Z4L5 1316 aa15.89■□□□□ 0.13
ACTN4-209ENST00000586538 AATKQ6ZMQ8 1374 aa15.88■□□□□ 0.13
ACTN4-209ENST00000586538 NINLQ9Y2I6 1382 aa15.88■□□□□ 0.13
ACTN4-209ENST00000586538 CPSF1Q10570 1443 aaKnown RBP15.88■□□□□ 0.13
ACTN4-209ENST00000586538 PDE3BQ13370 1112 aa15.88■□□□□ 0.13
ACTN4-209ENST00000586538 FAM196AQ6ZSG2 479 aa15.88■□□□□ 0.13
ACTN4-209ENST00000586538 HDGFL2Q7Z4V5 671 aaPredicted RBP15.88■□□□□ 0.13
ACTN4-209ENST00000586538 COL5A2P05997 1499 aaPredicted RBP15.88■□□□□ 0.13
ACTN4-209ENST00000586538 CAMTA1Q9Y6Y1 1673 aa15.88■□□□□ 0.13
ACTN4-209ENST00000586538 CRB1P82279 1406 aa15.87■□□□□ 0.13
ACTN4-209ENST00000586538 USP35Q9P2H5 1018 aa15.87■□□□□ 0.13
ACTN4-209ENST00000586538 MON2Q7Z3U7 1717 aa15.87■□□□□ 0.13
ACTN4-209ENST00000586538 ABCC6O95255 1503 aa15.87■□□□□ 0.13
ACTN4-209ENST00000586538 TERF2IPQ9NYB0 399 aa15.86■□□□□ 0.13
ACTN4-209ENST00000586538 ZBTB7CA1YPR0 619 aa15.85■□□□□ 0.13
ACTN4-209ENST00000586538 LARP1Q6PKG0 1096 aaKnown RBP15.85■□□□□ 0.13
ACTN4-209ENST00000586538 DISP2A7MBM2 1401 aa15.85■□□□□ 0.13
ACTN4-209ENST00000586538 TMC1Q8TDI8 760 aa15.84■□□□□ 0.13
ACTN4-209ENST00000586538 CDCA7Q9BWT1 371 aaPredicted RBP15.84■□□□□ 0.13
ACTN4-209ENST00000586538 CLSPNQ9HAW4 1339 aa15.84■□□□□ 0.13
ACTN4-209ENST00000586538 PARP4Q9UKK3 1724 aaKnown RBP15.83■□□□□ 0.13
ACTN4-209ENST00000586538 DEFB132Q7Z7B7 95 aa15.83■□□□□ 0.12
ACTN4-209ENST00000586538 TIMELESSQ9UNS1 1208 aa15.83■□□□□ 0.12
ACTN4-209ENST00000586538 PARD3Q8TEW0 1356 aa15.83■□□□□ 0.12
ACTN4-209ENST00000586538 EDC4Q6P2E9 1401 aaKnown RBP15.83■□□□□ 0.12
ACTN4-209ENST00000586538 USP54Q70EL1 1684 aa15.83■□□□□ 0.12
ACTN4-209ENST00000586538 TOM1L2Q6ZVM7 507 aa15.82■□□□□ 0.12
ACTN4-209ENST00000586538 USP31Q70CQ4 1352 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms