RNA–Protein interactions for RNA: ENST00000585864.1

SEC11C-203, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11C, Length 1,088 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-203ENST00000585864 TRPM3Q9HCF6 1732 aaPredicted RBP23.18■■□□□ 1.3
SEC11C-203ENST00000585864 POLR3AO14802 1390 aaPredicted RBP23.17■■□□□ 1.3
SEC11C-203ENST00000585864 SRPK2P78362 688 aaKnown RBP23.17■■□□□ 1.3
SEC11C-203ENST00000585864 ACEP12821 1306 aa23.16■■□□□ 1.3
SEC11C-203ENST00000585864 GLI3P10071 1580 aa23.16■■□□□ 1.3
SEC11C-203ENST00000585864 SF3B2Q13435 895 aaKnown RBP23.16■■□□□ 1.3
SEC11C-203ENST00000585864 PRDM11Q9NQV5 511 aa23.16■■□□□ 1.3
SEC11C-203ENST00000585864 ALS2Q96Q42 1657 aa23.16■■□□□ 1.3
SEC11C-203ENST00000585864 ZRANB1Q9UGI0 708 aa23.15■■□□□ 1.3
SEC11C-203ENST00000585864 BRD4O60885 1362 aaPredicted RBP23.14■■□□□ 1.3
SEC11C-203ENST00000585864 KRT27Q7Z3Y8 459 aa23.14■■□□□ 1.29
SEC11C-203ENST00000585864 ABCA3Q99758 1704 aa23.13■■□□□ 1.29
SEC11C-203ENST00000585864 PLCH1Q4KWH8 1693 aa23.13■■□□□ 1.29
SEC11C-203ENST00000585864 BLMP54132 1417 aaPredicted RBP23.13■■□□□ 1.29
SEC11C-203ENST00000585864 COL14A1Q05707 1796 aaKnown RBP23.12■■□□□ 1.29
SEC11C-203ENST00000585864 A0A0G2JS52 829 aa23.12■■□□□ 1.29
SEC11C-203ENST00000585864 MYT1Q01538 1121 aa23.12■■□□□ 1.29
SEC11C-203ENST00000585864 ABTB2Q8N961 1025 aa23.11■■□□□ 1.29
SEC11C-203ENST00000585864 NEUROD1Q13562 356 aa23.1■■□□□ 1.29
SEC11C-203ENST00000585864 NLRP13Q86W25 1043 aa23.1■■□□□ 1.29
SEC11C-203ENST00000585864 EVC2Q86UK5 1308 aa23.09■■□□□ 1.29
SEC11C-203ENST00000585864 SIN3AQ96ST3 1273 aa23.09■■□□□ 1.29
SEC11C-203ENST00000585864 SPATA31A5Q5VU36 1347 aa23.08■■□□□ 1.29
SEC11C-203ENST00000585864 SPATA31A7Q8IWB4 1347 aa23.08■■□□□ 1.29
SEC11C-203ENST00000585864 FAM98CQ17RN3 349 aaKnown RBP23.08■■□□□ 1.29
SEC11C-203ENST00000585864 PPIP5K1Q6PFW1 1433 aa23.08■■□□□ 1.28
SEC11C-203ENST00000585864 CABP2Q9NPB3 220 aa23.07■■□□□ 1.28
SEC11C-203ENST00000585864 KIAA0232Q92628 1395 aa23.06■■□□□ 1.28
SEC11C-203ENST00000585864 EVA1CP58658 441 aa23.06■■□□□ 1.28
SEC11C-203ENST00000585864 ROCK2O75116 1388 aaKnown RBP23.05■■□□□ 1.28
SEC11C-203ENST00000585864 ZC3H6P61129 1189 aaKnown RBP23.05■■□□□ 1.28
SEC11C-203ENST00000585864 NUTM2GQ5VZR2 741 aa23.05■■□□□ 1.28
SEC11C-203ENST00000585864 TOPAZ1Q8N9V7 1692 aa23.04■■□□□ 1.28
SEC11C-203ENST00000585864 EP400Q96L91 3159 aa23.03■■□□□ 1.28
SEC11C-203ENST00000585864 ZNF692Q9BU19 519 aaPredicted RBP23.03■■□□□ 1.28
SEC11C-203ENST00000585864 CABP1Q9NZU7 370 aa23.03■■□□□ 1.28
SEC11C-203ENST00000585864 NRAPQ86VF7 1730 aa23.02■■□□□ 1.28
SEC11C-203ENST00000585864 CPDO75976 1380 aa23.01■■□□□ 1.27
SEC11C-203ENST00000585864 CHRNA2Q15822 529 aa23.01■■□□□ 1.27
SEC11C-203ENST00000585864 USP19O94966 1318 aa23.01■■□□□ 1.27
SEC11C-203ENST00000585864 SPATA31A1Q5TZJ5 1347 aa23.01■■□□□ 1.27
SEC11C-203ENST00000585864 CRYBG1Q9Y4K1 1723 aa23■■□□□ 1.27
SEC11C-203ENST00000585864 GCP02774 474 aa23■■□□□ 1.27
SEC11C-203ENST00000585864 BAG6P46379 1132 aa23■■□□□ 1.27
SEC11C-203ENST00000585864 STRN4Q9NRL3 753 aa23■■□□□ 1.27
SEC11C-203ENST00000585864 BRWD3Q6RI45 1802 aa22.98■■□□□ 1.27
SEC11C-203ENST00000585864 QRICH2Q9H0J4 1663 aa22.97■■□□□ 1.27
SEC11C-203ENST00000585864 NLRP6P59044 892 aa22.97■■□□□ 1.27
SEC11C-203ENST00000585864 BARGINQ6ZT62 677 aa22.97■■□□□ 1.27
SEC11C-203ENST00000585864 THRAP3Q9Y2W1 955 aaKnown RBP22.96■■□□□ 1.27
SEC11C-203ENST00000585864 USP6P35125 1406 aa22.96■■□□□ 1.27
SEC11C-203ENST00000585864 TRPM1Q7Z4N2 1603 aa22.96■■□□□ 1.27
SEC11C-203ENST00000585864 PHRF1Q9P1Y6 1649 aaKnown RBP22.96■■□□□ 1.27
SEC11C-203ENST00000585864 DEFB132Q7Z7B7 95 aa22.95■■□□□ 1.26
SEC11C-203ENST00000585864 FAM196AQ6ZSG2 479 aa22.94■■□□□ 1.26
SEC11C-203ENST00000585864 TCP11L2Q8N4U5 519 aa22.93■■□□□ 1.26
SEC11C-203ENST00000585864 SSH2Q76I76 1423 aa22.92■■□□□ 1.26
SEC11C-203ENST00000585864 TONSLQ96HA7 1378 aa22.92■■□□□ 1.26
SEC11C-203ENST00000585864 C11orf95C9JLR9 678 aaPredicted RBP22.92■■□□□ 1.26
SEC11C-203ENST00000585864 PDE3BQ13370 1112 aa22.92■■□□□ 1.26
SEC11C-203ENST00000585864 KCNH5Q8NCM2 988 aa22.92■■□□□ 1.26
SEC11C-203ENST00000585864 CARD11Q9BXL7 1154 aa22.92■■□□□ 1.26
SEC11C-203ENST00000585864 TTC21AQ8NDW8 1320 aa22.91■■□□□ 1.26
SEC11C-203ENST00000585864 SLC24A1O60721 1099 aa22.91■■□□□ 1.26
SEC11C-203ENST00000585864 USP35Q9P2H5 1018 aa22.91■■□□□ 1.26
SEC11C-203ENST00000585864 SBNO2Q9Y2G9 1366 aa22.9■■□□□ 1.26
SEC11C-203ENST00000585864 NRKQ7Z2Y5 1582 aa22.89■■□□□ 1.26
SEC11C-203ENST00000585864 LARP1Q6PKG0 1096 aaKnown RBP22.89■■□□□ 1.25
SEC11C-203ENST00000585864 AATKQ6ZMQ8 1374 aa22.89■■□□□ 1.25
SEC11C-203ENST00000585864 THSD7AQ9UPZ6 1657 aa22.88■■□□□ 1.25
SEC11C-203ENST00000585864 TRIM26Q12899 539 aaPredicted RBP22.88■■□□□ 1.25
SEC11C-203ENST00000585864 CAMTA1Q9Y6Y1 1673 aa22.87■■□□□ 1.25
SEC11C-203ENST00000585864 TTC21BQ7Z4L5 1316 aa22.87■■□□□ 1.25
SEC11C-203ENST00000585864 ZBTB7CA1YPR0 619 aa22.85■■□□□ 1.25
SEC11C-203ENST00000585864 PUS7Q96PZ0 661 aaKnown RBP22.85■■□□□ 1.25
SEC11C-203ENST00000585864 FAM182BQ5T319 152 aa22.84■■□□□ 1.25
SEC11C-203ENST00000585864 KTN1Q86UP2 1357 aaKnown RBP22.84■■□□□ 1.25
SEC11C-203ENST00000585864 DISP2A7MBM2 1401 aa22.83■■□□□ 1.25
SEC11C-203ENST00000585864 CRB1P82279 1406 aa22.83■■□□□ 1.25
SEC11C-203ENST00000585864 SLIT3O75094 1523 aa22.83■■□□□ 1.25
SEC11C-203ENST00000585864 EN1Q05925 392 aaPredicted RBP22.83■■□□□ 1.25
SEC11C-203ENST00000585864 COL5A2P05997 1499 aaPredicted RBP22.83■■□□□ 1.25
SEC11C-203ENST00000585864 LMO7Q8WWI1 1683 aa22.83■■□□□ 1.24
SEC11C-203ENST00000585864 CPSF1Q10570 1443 aaKnown RBP22.82■■□□□ 1.24
SEC11C-203ENST00000585864 CDCA7Q9BWT1 371 aaPredicted RBP22.82■■□□□ 1.24
SEC11C-203ENST00000585864 RGPD1P0DJD0 1748 aa22.82■■□□□ 1.24
SEC11C-203ENST00000585864 TRIM37O94972 964 aa22.81■■□□□ 1.24
SEC11C-203ENST00000585864 TOM1L2Q6ZVM7 507 aa22.81■■□□□ 1.24
SEC11C-203ENST00000585864 HDGFL2Q7Z4V5 671 aaPredicted RBP22.81■■□□□ 1.24
SEC11C-203ENST00000585864 PARD3Q8TEW0 1356 aa22.8■■□□□ 1.24
SEC11C-203ENST00000585864 ARHGEF25Q86VW2 580 aa22.8■■□□□ 1.24
SEC11C-203ENST00000585864 APBA3O96018 575 aa22.79■■□□□ 1.24
SEC11C-203ENST00000585864 TERF2IPQ9NYB0 399 aa22.79■■□□□ 1.24
SEC11C-203ENST00000585864 TMC1Q8TDI8 760 aa22.78■■□□□ 1.24
SEC11C-203ENST00000585864 WDR17Q8IZU2 1322 aa22.78■■□□□ 1.24
SEC11C-203ENST00000585864 DDB1Q16531 1140 aa22.76■■□□□ 1.23
SEC11C-203ENST00000585864 CAMKK2Q96RR4 588 aa22.76■■□□□ 1.23
SEC11C-203ENST00000585864 PIK3C2AO00443 1686 aa22.75■■□□□ 1.23
SEC11C-203ENST00000585864 SRCAPQ6ZRS2 3230 aa22.75■■□□□ 1.23
SEC11C-203ENST00000585864 CSB-PGBD3P0DP91 1061 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 193.3 ms