RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 HDGFL2Q7Z4V5 671 aaPredicted RBP23.26■■□□□ 1.31
HMG20B-215ENST00000585741 TERF2IPQ9NYB0 399 aa23.26■■□□□ 1.31
HMG20B-215ENST00000585741 CABP1Q9NZU7 370 aa23.26■■□□□ 1.31
HMG20B-215ENST00000585741 SLC12A5Q9H2X9 1139 aa23.25■■□□□ 1.31
HMG20B-215ENST00000585741 PPIP5K1Q6PFW1 1433 aa23.25■■□□□ 1.31
HMG20B-215ENST00000585741 MARF1Q9Y4F3 1742 aaKnown RBP23.24■■□□□ 1.31
HMG20B-215ENST00000585741 FMN2Q9NZ56 1722 aa23.23■■□□□ 1.31
HMG20B-215ENST00000585741 PRR36Q9H6K5 1346 aa23.23■■□□□ 1.31
HMG20B-215ENST00000585741 ATP7BP35670 1465 aa23.23■■□□□ 1.31
HMG20B-215ENST00000585741 NGDNQ8NEJ9 315 aaKnown RBP23.22■■□□□ 1.31
HMG20B-215ENST00000585741 PANK3Q9H999 370 aa23.22■■□□□ 1.31
HMG20B-215ENST00000585741 EP400Q96L91 3159 aa23.2■■□□□ 1.3
HMG20B-215ENST00000585741 SPATA31A3Q5VYP0 1347 aa23.2■■□□□ 1.3
HMG20B-215ENST00000585741 PMFBP1Q8TBY8 1022 aa23.2■■□□□ 1.3
HMG20B-215ENST00000585741 PHF8Q9UPP1 1060 aa23.2■■□□□ 1.3
HMG20B-215ENST00000585741 SRCAPQ6ZRS2 3230 aa23.19■■□□□ 1.3
HMG20B-215ENST00000585741 KNSTRNQ9Y448 316 aa23.18■■□□□ 1.3
HMG20B-215ENST00000585741 ITSN1Q15811 1721 aa23.18■■□□□ 1.3
HMG20B-215ENST00000585741 SLIT2O94813 1529 aa23.18■■□□□ 1.3
HMG20B-215ENST00000585741 ANKRD36BQ8N2N9 1353 aa23.17■■□□□ 1.3
HMG20B-215ENST00000585741 KIF1AQ12756 1690 aa23.17■■□□□ 1.3
HMG20B-215ENST00000585741 PLEKHG3A1L390 1219 aa23.17■■□□□ 1.3
HMG20B-215ENST00000585741 GJD4Q96KN9 370 aaPredicted RBP23.17■■□□□ 1.3
HMG20B-215ENST00000585741 ZNF692Q9BU19 519 aaPredicted RBP23.17■■□□□ 1.3
HMG20B-215ENST00000585741 DIEXFQ68CQ4 756 aaKnown RBP23.16■■□□□ 1.3
HMG20B-215ENST00000585741 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.16■■□□□ 1.3
HMG20B-215ENST00000585741 ACEP12821 1306 aa23.15■■□□□ 1.3
HMG20B-215ENST00000585741 KRT28Q7Z3Y7 464 aa23.15■■□□□ 1.3
HMG20B-215ENST00000585741 MYOM1P52179 1685 aa23.14■■□□□ 1.29
HMG20B-215ENST00000585741 USP32Q8NFA0 1604 aa23.14■■□□□ 1.29
HMG20B-215ENST00000585741 GLI3P10071 1580 aa23.14■■□□□ 1.29
HMG20B-215ENST00000585741 KTN1Q86UP2 1357 aaKnown RBP23.14■■□□□ 1.29
HMG20B-215ENST00000585741 UNC5CLQ8IV45 518 aa23.13■■□□□ 1.29
HMG20B-215ENST00000585741 RGPD8O14715 1765 aaPredicted RBP23.13■■□□□ 1.29
HMG20B-215ENST00000585741 A0A1W2PP64 1363 aa23.13■■□□□ 1.29
HMG20B-215ENST00000585741 PSME1Q06323 249 aa23.12■■□□□ 1.29
HMG20B-215ENST00000585741 TOPAZ1Q8N9V7 1692 aa23.12■■□□□ 1.29
HMG20B-215ENST00000585741 TNS3Q68CZ2 1445 aa23.1■■□□□ 1.29
HMG20B-215ENST00000585741 NSD3Q9BZ95 1437 aa23.09■■□□□ 1.29
HMG20B-215ENST00000585741 CNGB1Q14028 1251 aaPredicted RBP23.09■■□□□ 1.29
HMG20B-215ENST00000585741 POLR3AO14802 1390 aaPredicted RBP23.08■■□□□ 1.29
HMG20B-215ENST00000585741 CPSF1Q10570 1443 aaKnown RBP23.08■■□□□ 1.28
HMG20B-215ENST00000585741 CGNL1Q0VF96 1302 aa23.08■■□□□ 1.28
HMG20B-215ENST00000585741 SBNO1A3KN83 1393 aa23.07■■□□□ 1.28
HMG20B-215ENST00000585741 CCDC125Q86Z20 511 aa23.07■■□□□ 1.28
HMG20B-215ENST00000585741 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.07■■□□□ 1.28
HMG20B-215ENST00000585741 CABLES1Q8TDN4 633 aa23.07■■□□□ 1.28
HMG20B-215ENST00000585741 ANP32CO43423 234 aa23.06■■□□□ 1.28
HMG20B-215ENST00000585741 PAK3O75914 559 aaPredicted RBP23.06■■□□□ 1.28
HMG20B-215ENST00000585741 CARD14Q9BXL6 1004 aa23.06■■□□□ 1.28
HMG20B-215ENST00000585741 CD163L1Q9NR16 1453 aa23.05■■□□□ 1.28
HMG20B-215ENST00000585741 EDC4Q6P2E9 1401 aaKnown RBP23.05■■□□□ 1.28
HMG20B-215ENST00000585741 USP6P35125 1406 aa23.04■■□□□ 1.28
HMG20B-215ENST00000585741 ABCA3Q99758 1704 aa23.03■■□□□ 1.28
HMG20B-215ENST00000585741 PER1O15534 1290 aaPredicted RBP23.03■■□□□ 1.28
HMG20B-215ENST00000585741 BRD4O60885 1362 aaPredicted RBP23.02■■□□□ 1.28
HMG20B-215ENST00000585741 ONECUT3O60422 494 aaPredicted RBP23.02■■□□□ 1.28
HMG20B-215ENST00000585741 VPS72Q15906 364 aa23.02■■□□□ 1.28
HMG20B-215ENST00000585741 CC2D1BQ5T0F9 858 aaKnown RBP23.02■■□□□ 1.28
HMG20B-215ENST00000585741 BRWD3Q6RI45 1802 aa23.01■■□□□ 1.27
HMG20B-215ENST00000585741 TTC21BQ7Z4L5 1316 aa23.01■■□□□ 1.27
HMG20B-215ENST00000585741 TTC21AQ8NDW8 1320 aa23.01■■□□□ 1.27
HMG20B-215ENST00000585741 PLCH1Q4KWH8 1693 aa23■■□□□ 1.27
HMG20B-215ENST00000585741 AKAP12Q02952 1782 aa23■■□□□ 1.27
HMG20B-215ENST00000585741 LMOD2Q6P5Q4 547 aa23■■□□□ 1.27
HMG20B-215ENST00000585741 ZRANB1Q9UGI0 708 aa23■■□□□ 1.27
HMG20B-215ENST00000585741 ARHGEF10O15013 1369 aa23■■□□□ 1.27
HMG20B-215ENST00000585741 BLMP54132 1417 aaPredicted RBP22.99■■□□□ 1.27
HMG20B-215ENST00000585741 NWD2Q9ULI1 1742 aa22.99■■□□□ 1.27
HMG20B-215ENST00000585741 FAM83GA6ND36 823 aa22.99■■□□□ 1.27
HMG20B-215ENST00000585741 SEPT12Q8IYM1 358 aa22.99■■□□□ 1.27
HMG20B-215ENST00000585741 TRPM3Q9HCF6 1732 aaPredicted RBP22.99■■□□□ 1.27
HMG20B-215ENST00000585741 NSD2O96028 1365 aa22.98■■□□□ 1.27
HMG20B-215ENST00000585741 MON2Q7Z3U7 1717 aa22.97■■□□□ 1.27
HMG20B-215ENST00000585741 MORC1Q86VD1 984 aa22.97■■□□□ 1.27
HMG20B-215ENST00000585741 ABTB2Q8N961 1025 aa22.97■■□□□ 1.27
HMG20B-215ENST00000585741 PLEKHG5O94827 1062 aa22.96■■□□□ 1.27
HMG20B-215ENST00000585741 AMER1Q5JTC6 1135 aaPredicted RBP22.96■■□□□ 1.27
HMG20B-215ENST00000585741 COG3Q96JB2 828 aa22.96■■□□□ 1.27
HMG20B-215ENST00000585741 GGNBP2Q9H3C7 697 aa22.96■■□□□ 1.27
HMG20B-215ENST00000585741 NME9Q86XW9 330 aa22.95■■□□□ 1.26
HMG20B-215ENST00000585741 NPC1L1Q9UHC9 1359 aa22.95■■□□□ 1.26
HMG20B-215ENST00000585741 ALS2Q96Q42 1657 aa22.94■■□□□ 1.26
HMG20B-215ENST00000585741 FYB1O15117 783 aa22.94■■□□□ 1.26
HMG20B-215ENST00000585741 HAP1P54257 671 aaPredicted RBP22.94■■□□□ 1.26
HMG20B-215ENST00000585741 RALBP1Q15311 655 aa22.94■■□□□ 1.26
HMG20B-215ENST00000585741 DEFB132Q7Z7B7 95 aa22.94■■□□□ 1.26
HMG20B-215ENST00000585741 NLRP6P59044 892 aa22.93■■□□□ 1.26
HMG20B-215ENST00000585741 NRAPQ86VF7 1730 aa22.93■■□□□ 1.26
HMG20B-215ENST00000585741 NLRP13Q86W25 1043 aa22.91■■□□□ 1.26
HMG20B-215ENST00000585741 PRKRIP1Q9H875 184 aaPredicted RBP22.91■■□□□ 1.26
HMG20B-215ENST00000585741 SSH2Q76I76 1423 aa22.91■■□□□ 1.26
HMG20B-215ENST00000585741 NUTM2GQ5VZR2 741 aa22.9■■□□□ 1.26
HMG20B-215ENST00000585741 KRT27Q7Z3Y8 459 aa22.89■■□□□ 1.25
HMG20B-215ENST00000585741 NRKQ7Z2Y5 1582 aa22.89■■□□□ 1.25
HMG20B-215ENST00000585741 CRYBG1Q9Y4K1 1723 aa22.88■■□□□ 1.25
HMG20B-215ENST00000585741 KIF20BQ96Q89 1820 aa22.88■■□□□ 1.25
HMG20B-215ENST00000585741 TNNT2P45379 298 aaPredicted RBP22.88■■□□□ 1.25
HMG20B-215ENST00000585741 BTG4Q9NY30 223 aa22.87■■□□□ 1.25
HMG20B-215ENST00000585741 CCDC9Q9Y3X0 531 aaKnown RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms