RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 USP6P35125 1406 aa29.88■■■□□ 2.37
RETREG3-202ENST00000585726 ADAMTS2O95450 1211 aa29.88■■■□□ 2.37
RETREG3-202ENST00000585726 HAP1P54257 671 aaPredicted RBP29.88■■■□□ 2.37
RETREG3-202ENST00000585726 HDGFL2Q7Z4V5 671 aaPredicted RBP29.88■■■□□ 2.37
RETREG3-202ENST00000585726 PHF23Q9BUL5 403 aaPredicted RBP29.87■■■□□ 2.37
RETREG3-202ENST00000585726 KTN1Q86UP2 1357 aaKnown RBP29.87■■■□□ 2.37
RETREG3-202ENST00000585726 COL22A1Q8NFW1 1626 aaPredicted RBP29.86■■■□□ 2.37
RETREG3-202ENST00000585726 ABTB2Q8N961 1025 aa29.86■■■□□ 2.37
RETREG3-202ENST00000585726 TERF2IPQ9NYB0 399 aa29.86■■■□□ 2.37
RETREG3-202ENST00000585726 CPSF1Q10570 1443 aaKnown RBP29.85■■■□□ 2.37
RETREG3-202ENST00000585726 CD163L1Q9NR16 1453 aa29.84■■■□□ 2.37
RETREG3-202ENST00000585726 ALS2Q96Q42 1657 aa29.83■■■□□ 2.37
RETREG3-202ENST00000585726 NINLQ9Y2I6 1382 aa29.83■■■□□ 2.37
RETREG3-202ENST00000585726 C11orf95C9JLR9 678 aaPredicted RBP29.82■■■□□ 2.36
RETREG3-202ENST00000585726 AKAP12Q02952 1782 aa29.82■■■□□ 2.36
RETREG3-202ENST00000585726 A0A1W2PP64 1363 aa29.81■■■□□ 2.36
RETREG3-202ENST00000585726 TTC21BQ7Z4L5 1316 aa29.81■■■□□ 2.36
RETREG3-202ENST00000585726 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.81■■■□□ 2.36
RETREG3-202ENST00000585726 C8orf37Q96NL8 207 aa29.81■■■□□ 2.36
RETREG3-202ENST00000585726 BRD4O60885 1362 aaPredicted RBP29.8■■■□□ 2.36
RETREG3-202ENST00000585726 ZEB1P37275 1124 aaPredicted RBP29.79■■■□□ 2.36
RETREG3-202ENST00000585726 SSH2Q76I76 1423 aa29.79■■■□□ 2.36
RETREG3-202ENST00000585726 NLRP6P59044 892 aa29.76■■■□□ 2.35
RETREG3-202ENST00000585726 NLRP13Q86W25 1043 aa29.75■■■□□ 2.35
RETREG3-202ENST00000585726 NGLY1Q96IV0 654 aa29.75■■■□□ 2.35
RETREG3-202ENST00000585726 ANKRD36BQ8N2N9 1353 aa29.75■■■□□ 2.35
RETREG3-202ENST00000585726 TTC21AQ8NDW8 1320 aa29.74■■■□□ 2.35
RETREG3-202ENST00000585726 MON2Q7Z3U7 1717 aa29.74■■■□□ 2.35
RETREG3-202ENST00000585726 EDC4Q6P2E9 1401 aaKnown RBP29.72■■■□□ 2.35
RETREG3-202ENST00000585726 NRKQ7Z2Y5 1582 aa29.72■■■□□ 2.35
RETREG3-202ENST00000585726 NME9Q86XW9 330 aa29.71■■■□□ 2.35
RETREG3-202ENST00000585726 KIF7Q2M1P5 1343 aa29.71■■■□□ 2.35
RETREG3-202ENST00000585726 MYOM1P52179 1685 aa29.7■■■□□ 2.35
RETREG3-202ENST00000585726 RGS17Q9UGC6 210 aaPredicted RBP29.7■■■□□ 2.35
RETREG3-202ENST00000585726 ZRANB1Q9UGI0 708 aa29.7■■■□□ 2.35
RETREG3-202ENST00000585726 ABCA3Q99758 1704 aa29.7■■■□□ 2.34
RETREG3-202ENST00000585726 AFF2P51816 1311 aa29.7■■■□□ 2.34
RETREG3-202ENST00000585726 PIK3C2AO00443 1686 aa29.69■■■□□ 2.34
RETREG3-202ENST00000585726 ZC3H6P61129 1189 aaKnown RBP29.67■■■□□ 2.34
RETREG3-202ENST00000585726 USP19O94966 1318 aa29.67■■■□□ 2.34
RETREG3-202ENST00000585726 SOX12O15370 315 aa29.66■■■□□ 2.34
RETREG3-202ENST00000585726 CRYBG1Q9Y4K1 1723 aa29.65■■■□□ 2.34
RETREG3-202ENST00000585726 PHRF1Q9P1Y6 1649 aaKnown RBP29.64■■■□□ 2.34
RETREG3-202ENST00000585726 GCP02774 474 aa29.64■■■□□ 2.34
RETREG3-202ENST00000585726 CARD14Q9BXL6 1004 aa29.64■■■□□ 2.34
RETREG3-202ENST00000585726 MARF1Q9Y4F3 1742 aaKnown RBP29.63■■■□□ 2.33
RETREG3-202ENST00000585726 ZBTB7CA1YPR0 619 aa29.63■■■□□ 2.33
RETREG3-202ENST00000585726 FAM83GA6ND36 823 aa29.63■■■□□ 2.33
RETREG3-202ENST00000585726 PANK3Q9H999 370 aa29.63■■■□□ 2.33
RETREG3-202ENST00000585726 ZNF772Q68DY9 489 aaPredicted RBP29.62■■■□□ 2.33
RETREG3-202ENST00000585726 PRDM11Q9NQV5 511 aa29.62■■■□□ 2.33
RETREG3-202ENST00000585726 USP21Q9UK80 565 aa29.62■■■□□ 2.33
RETREG3-202ENST00000585726 KIAA0232Q92628 1395 aa29.61■■■□□ 2.33
RETREG3-202ENST00000585726 NSD3Q9BZ95 1437 aa29.61■■■□□ 2.33
RETREG3-202ENST00000585726 CHRNA2Q15822 529 aa29.6■■■□□ 2.33
RETREG3-202ENST00000585726 POTEAQ6S8J7 498 aa29.6■■■□□ 2.33
RETREG3-202ENST00000585726 FNBP4Q8N3X1 1017 aaPredicted RBP29.6■■■□□ 2.33
RETREG3-202ENST00000585726 WASHC2AQ641Q2 1341 aa29.6■■■□□ 2.33
RETREG3-202ENST00000585726 CCDC7Q96M83 1385 aa29.6■■■□□ 2.33
RETREG3-202ENST00000585726 USP31Q70CQ4 1352 aa29.59■■■□□ 2.33
RETREG3-202ENST00000585726 SLIT3O75094 1523 aa29.57■■■□□ 2.32
RETREG3-202ENST00000585726 KCNH5Q8NCM2 988 aa29.57■■■□□ 2.32
RETREG3-202ENST00000585726 GGNBP2Q9H3C7 697 aa29.57■■■□□ 2.32
RETREG3-202ENST00000585726 FYB1O15117 783 aa29.56■■■□□ 2.32
RETREG3-202ENST00000585726 COG3Q96JB2 828 aa29.56■■■□□ 2.32
RETREG3-202ENST00000585726 QTRT2Q9H974 415 aaKnown RBP29.55■■■□□ 2.32
RETREG3-202ENST00000585726 BTG4Q9NY30 223 aa29.54■■■□□ 2.32
RETREG3-202ENST00000585726 SLIT2O94813 1529 aa29.53■■■□□ 2.32
RETREG3-202ENST00000585726 UNC5CLQ8IV45 518 aa29.52■■■□□ 2.32
RETREG3-202ENST00000585726 BCL9LQ86UU0 1499 aa29.52■■■□□ 2.32
RETREG3-202ENST00000585726 OVOS2A0A0J9YW53 1432 aa29.52■■■□□ 2.32
RETREG3-202ENST00000585726 OVOS2Q6IE36 1432 aa29.52■■■□□ 2.32
RETREG3-202ENST00000585726 COL14A1Q05707 1796 aaKnown RBP29.51■■■□□ 2.31
RETREG3-202ENST00000585726 CPDO75976 1380 aa29.51■■■□□ 2.31
RETREG3-202ENST00000585726 PLCH1Q4KWH8 1693 aa29.5■■■□□ 2.31
RETREG3-202ENST00000585726 CGNL1Q0VF96 1302 aa29.5■■■□□ 2.31
RETREG3-202ENST00000585726 TRPC5Q9UL62 973 aaPredicted RBP29.5■■■□□ 2.31
RETREG3-202ENST00000585726 ILDR2Q71H61 639 aa29.47■■■□□ 2.31
RETREG3-202ENST00000585726 ARHGEF25Q86VW2 580 aa29.47■■■□□ 2.31
RETREG3-202ENST00000585726 USP54Q70EL1 1684 aa29.47■■■□□ 2.31
RETREG3-202ENST00000585726 KIF20BQ96Q89 1820 aa29.46■■■□□ 2.31
RETREG3-202ENST00000585726 FBLN1P23142 703 aa29.46■■■□□ 2.31
RETREG3-202ENST00000585726 STRN4Q9NRL3 753 aa29.46■■■□□ 2.31
RETREG3-202ENST00000585726 CCDC9Q9Y3X0 531 aaKnown RBP29.46■■■□□ 2.31
RETREG3-202ENST00000585726 KNSTRNQ9Y448 316 aa29.46■■■□□ 2.31
RETREG3-202ENST00000585726 NFAT5O94916 1531 aa29.45■■■□□ 2.31
RETREG3-202ENST00000585726 RXRBP28702 533 aa29.45■■■□□ 2.31
RETREG3-202ENST00000585726 EVA1CP58658 441 aa29.44■■■□□ 2.3
RETREG3-202ENST00000585726 ATRNO75882 1429 aa29.44■■■□□ 2.3
RETREG3-202ENST00000585726 NWD2Q9ULI1 1742 aa29.42■■■□□ 2.3
RETREG3-202ENST00000585726 AATKQ6ZMQ8 1374 aa29.41■■■□□ 2.3
RETREG3-202ENST00000585726 RBM6P78332 1123 aaKnown RBP29.41■■■□□ 2.3
RETREG3-202ENST00000585726 CAMTA1Q9Y6Y1 1673 aa29.4■■■□□ 2.3
RETREG3-202ENST00000585726 VPS72Q15906 364 aa29.4■■■□□ 2.3
RETREG3-202ENST00000585726 GJD4Q96KN9 370 aaPredicted RBP29.4■■■□□ 2.3
RETREG3-202ENST00000585726 AXIN2Q9Y2T1 843 aa29.39■■■□□ 2.3
RETREG3-202ENST00000585726 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.39■■■□□ 2.3
RETREG3-202ENST00000585726 NRAPQ86VF7 1730 aa29.38■■■□□ 2.29
RETREG3-202ENST00000585726 LMO7Q8WWI1 1683 aa29.37■■■□□ 2.29
RETREG3-202ENST00000585726 TNNT2P45379 298 aaPredicted RBP29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms